RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
CDRT1-202ENST00000354433 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
CDRT1-202ENST00000354433 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
CDRT1-202ENST00000354433 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
CDRT1-202ENST00000354433 HRES1P13985 223 aa5.97□□□□□ -1.45
CDRT1-202ENST00000354433 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
CDRT1-202ENST00000354433 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
CDRT1-202ENST00000354433 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
CDRT1-202ENST00000354433 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
CDRT1-202ENST00000354433 ACYP2P14621 99 aa5.9□□□□□ -1.46
CDRT1-202ENST00000354433 SPINK7P58062 85 aa5.89□□□□□ -1.47
CDRT1-202ENST00000354433 COA5Q86WW8 74 aa5.89□□□□□ -1.47
CDRT1-202ENST00000354433 A8MUN3 132 aa5.88□□□□□ -1.47
CDRT1-202ENST00000354433 C4orf26Q17RF5 130 aa5.81□□□□□ -1.48
CDRT1-202ENST00000354433 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
CDRT1-202ENST00000354433 Q1T7F1 81 aa5.8□□□□□ -1.48
CDRT1-202ENST00000354433 V9GYY9 64 aa5.8□□□□□ -1.48
CDRT1-202ENST00000354433 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
CDRT1-202ENST00000354433 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
CDRT1-202ENST00000354433 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
CDRT1-202ENST00000354433 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
CDRT1-202ENST00000354433 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
CDRT1-202ENST00000354433 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
CDRT1-202ENST00000354433 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
CDRT1-202ENST00000354433 MT2AP02795 61 aa5.67□□□□□ -1.5
CDRT1-202ENST00000354433 PRR15LQ9BU68 103 aa5.63□□□□□ -1.51
CDRT1-202ENST00000354433 USH2AO75445 5202 aa5.63□□□□□ -1.51
CDRT1-202ENST00000354433 PSPHP1O15172 72 aa5.63□□□□□ -1.51
CDRT1-202ENST00000354433 MT1FP04733 61 aa5.63□□□□□ -1.51
CDRT1-202ENST00000354433 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
CDRT1-202ENST00000354433 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
CDRT1-202ENST00000354433 Q5VV11 94 aa5.61□□□□□ -1.51
CDRT1-202ENST00000354433 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.52
CDRT1-202ENST00000354433 S4R3F8 94 aa5.59□□□□□ -1.52
CDRT1-202ENST00000354433 A0A1B0GU69 56 aa5.58□□□□□ -1.52
CDRT1-202ENST00000354433 SSPOA2VEC9 5147 aa5.57□□□□□ -1.52
CDRT1-202ENST00000354433 LCA10Q71F78 164 aa5.55□□□□□ -1.52
CDRT1-202ENST00000354433 SEC61GP60059 68 aa5.55□□□□□ -1.52
CDRT1-202ENST00000354433 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
CDRT1-202ENST00000354433 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
CDRT1-202ENST00000354433 A6NED7 52 aa5.48□□□□□ -1.53
CDRT1-202ENST00000354433 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
CDRT1-202ENST00000354433 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
CDRT1-202ENST00000354433 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
CDRT1-202ENST00000354433 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
CDRT1-202ENST00000354433 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
CDRT1-202ENST00000354433 UQCR11O14957 56 aa5.44□□□□□ -1.54
CDRT1-202ENST00000354433 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
CDRT1-202ENST00000354433 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
CDRT1-202ENST00000354433 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
CDRT1-202ENST00000354433 H0YAA0 97 aa5.39□□□□□ -1.55
CDRT1-202ENST00000354433 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
CDRT1-202ENST00000354433 A0A1B0GU33 70 aa5.38□□□□□ -1.55
CDRT1-202ENST00000354433 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
CDRT1-202ENST00000354433 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
CDRT1-202ENST00000354433 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
CDRT1-202ENST00000354433 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
CDRT1-202ENST00000354433 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
CDRT1-202ENST00000354433 A8MU10 97 aa5.31□□□□□ -1.56
CDRT1-202ENST00000354433 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
CDRT1-202ENST00000354433 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
CDRT1-202ENST00000354433 P0C880 135 aa5.29□□□□□ -1.56
CDRT1-202ENST00000354433 M0QZ58 72 aa5.25□□□□□ -1.57
CDRT1-202ENST00000354433 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.57
CDRT1-202ENST00000354433 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
CDRT1-202ENST00000354433 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
CDRT1-202ENST00000354433 A6NN06 94 aa5.16□□□□□ -1.58
CDRT1-202ENST00000354433 CRIPTQ9P021 101 aa5.15□□□□□ -1.59
CDRT1-202ENST00000354433 K7ERS5 55 aa5.14□□□□□ -1.59
CDRT1-202ENST00000354433 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
CDRT1-202ENST00000354433 R4GN34 69 aa5.14□□□□□ -1.59
CDRT1-202ENST00000354433 MT1BP07438 61 aa5.13□□□□□ -1.59
CDRT1-202ENST00000354433 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
CDRT1-202ENST00000354433 A0A0D9SG42 100 aa5.1□□□□□ -1.59
CDRT1-202ENST00000354433 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
CDRT1-202ENST00000354433 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
CDRT1-202ENST00000354433 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
CDRT1-202ENST00000354433 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
CDRT1-202ENST00000354433 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
CDRT1-202ENST00000354433 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
CDRT1-202ENST00000354433 LINC01554Q52M75 96 aa5□□□□□ -1.61
CDRT1-202ENST00000354433 LCE4AQ5TA78 99 aa5□□□□□ -1.61
CDRT1-202ENST00000354433 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
CDRT1-202ENST00000354433 H3BS24 57 aa4.99□□□□□ -1.61
CDRT1-202ENST00000354433 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
CDRT1-202ENST00000354433 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
CDRT1-202ENST00000354433 NEBP20929 6669 aa4.95□□□□□ -1.62
CDRT1-202ENST00000354433 ROMO1P60602 79 aa4.93□□□□□ -1.62
CDRT1-202ENST00000354433 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
CDRT1-202ENST00000354433 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
CDRT1-202ENST00000354433 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
CDRT1-202ENST00000354433 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
CDRT1-202ENST00000354433 KMT2DO14686 5537 aa4.83□□□□□ -1.64
CDRT1-202ENST00000354433 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
CDRT1-202ENST00000354433 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
CDRT1-202ENST00000354433 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
CDRT1-202ENST00000354433 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
CDRT1-202ENST00000354433 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
CDRT1-202ENST00000354433 MT1XP80297 61 aa4.8□□□□□ -1.64
CDRT1-202ENST00000354433 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms