RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
TRIM41-202ENST00000351937 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
TRIM41-202ENST00000351937 HERC2O95714 4834 aa9.83□□□□□ -0.84
TRIM41-202ENST00000351937 TPRXLQ17RH7 258 aa9.78□□□□□ -0.84
TRIM41-202ENST00000351937 J3QL48 77 aa9.74□□□□□ -0.85
TRIM41-202ENST00000351937 H3BS24 57 aa9.66□□□□□ -0.86
TRIM41-202ENST00000351937 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
TRIM41-202ENST00000351937 A0A1B0GU69 56 aa9.6□□□□□ -0.87
TRIM41-202ENST00000351937 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
TRIM41-202ENST00000351937 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
TRIM41-202ENST00000351937 LRP2P98164 4655 aa9.57□□□□□ -0.88
TRIM41-202ENST00000351937 LPAP08519 4548 aa9.56□□□□□ -0.88
TRIM41-202ENST00000351937 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
TRIM41-202ENST00000351937 SPATA8Q6RVD6 105 aa9.49□□□□□ -0.89
TRIM41-202ENST00000351937 MIR22HGQ0VDD5 57 aa9.49□□□□□ -0.89
TRIM41-202ENST00000351937 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
TRIM41-202ENST00000351937 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
TRIM41-202ENST00000351937 UQCR11O14957 56 aa9.41□□□□□ -0.9
TRIM41-202ENST00000351937 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
TRIM41-202ENST00000351937 S4R3F8 94 aa9.28□□□□□ -0.92
TRIM41-202ENST00000351937 HERC1Q15751 4861 aa9.27□□□□□ -0.92
TRIM41-202ENST00000351937 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
TRIM41-202ENST00000351937 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
TRIM41-202ENST00000351937 HMCN2Q8NDA2 5059 aa9.22□□□□□ -0.93
TRIM41-202ENST00000351937 KRTAP4-1Q9BYQ7 146 aa9.2□□□□□ -0.94
TRIM41-202ENST00000351937 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
TRIM41-202ENST00000351937 H0YAA0 97 aa9.15□□□□□ -0.94
TRIM41-202ENST00000351937 A0A1B0GU33 70 aa9.14□□□□□ -0.95
TRIM41-202ENST00000351937 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
TRIM41-202ENST00000351937 ROMO1P60602 79 aa9.02□□□□□ -0.97
TRIM41-202ENST00000351937 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
TRIM41-202ENST00000351937 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
TRIM41-202ENST00000351937 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
TRIM41-202ENST00000351937 MUC2Q02817 5179 aa8.97□□□□□ -0.97
TRIM41-202ENST00000351937 P0C880 135 aa8.89□□□□□ -0.99
TRIM41-202ENST00000351937 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
TRIM41-202ENST00000351937 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
TRIM41-202ENST00000351937 UBR4Q5T4S7 5183 aa8.77□□□□□ -1
TRIM41-202ENST00000351937 K7ERS5 55 aa8.75□□□□□ -1.01
TRIM41-202ENST00000351937 A0A0D9SG42 100 aa8.74□□□□□ -1.01
TRIM41-202ENST00000351937 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
TRIM41-202ENST00000351937 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
TRIM41-202ENST00000351937 M0QZ58 72 aa8.69□□□□□ -1.02
TRIM41-202ENST00000351937 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
TRIM41-202ENST00000351937 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
TRIM41-202ENST00000351937 R4GN34 69 aa8.58□□□□□ -1.04
TRIM41-202ENST00000351937 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
TRIM41-202ENST00000351937 NDUFAF8A1L188 74 aa8.54□□□□□ -1.04
TRIM41-202ENST00000351937 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
TRIM41-202ENST00000351937 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
TRIM41-202ENST00000351937 MT1HP80294 61 aa8.51□□□□□ -1.05
TRIM41-202ENST00000351937 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
TRIM41-202ENST00000351937 M0R2T5 61 aa8.47□□□□□ -1.05
TRIM41-202ENST00000351937 KRTAP15-1Q3LI76 137 aa8.4□□□□□ -1.07
TRIM41-202ENST00000351937 A0A0A0MQY5 61 aa8.37□□□□□ -1.07
TRIM41-202ENST00000351937 KRTAP9-8Q9BYQ0 159 aa8.24□□□□□ -1.09
TRIM41-202ENST00000351937 MT2AP02795 61 aa8.23□□□□□ -1.09
TRIM41-202ENST00000351937 SPRR2GQ9BYE4 73 aa8.19□□□□□ -1.1
TRIM41-202ENST00000351937 MT1FP04733 61 aa8.18□□□□□ -1.1
TRIM41-202ENST00000351937 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
TRIM41-202ENST00000351937 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
TRIM41-202ENST00000351937 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
TRIM41-202ENST00000351937 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
TRIM41-202ENST00000351937 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
TRIM41-202ENST00000351937 KRTAP19-8Q3LI54 63 aa7.93□□□□□ -1.14
TRIM41-202ENST00000351937 KRTAP9-3Q9BYQ3 159 aa7.93□□□□□ -1.14
TRIM41-202ENST00000351937 MT1BP07438 61 aa7.8□□□□□ -1.16
TRIM41-202ENST00000351937 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
TRIM41-202ENST00000351937 TNP1P09430 55 aa7.71□□□□□ -1.17
TRIM41-202ENST00000351937 LCE2BO14633 110 aa7.67□□□□□ -1.18
TRIM41-202ENST00000351937 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
TRIM41-202ENST00000351937 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
TRIM41-202ENST00000351937 MT1XP80297 61 aa7.6□□□□□ -1.19
TRIM41-202ENST00000351937 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
TRIM41-202ENST00000351937 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
TRIM41-202ENST00000351937 USH2AO75445 5202 aa7.45□□□□□ -1.22
TRIM41-202ENST00000351937 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
TRIM41-202ENST00000351937 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
TRIM41-202ENST00000351937 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
TRIM41-202ENST00000351937 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.26
TRIM41-202ENST00000351937 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
TRIM41-202ENST00000351937 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
TRIM41-202ENST00000351937 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
TRIM41-202ENST00000351937 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
TRIM41-202ENST00000351937 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
TRIM41-202ENST00000351937 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
TRIM41-202ENST00000351937 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.29
TRIM41-202ENST00000351937 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.29
TRIM41-202ENST00000351937 KMT2DO14686 5537 aa6.96□□□□□ -1.3
TRIM41-202ENST00000351937 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
TRIM41-202ENST00000351937 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
TRIM41-202ENST00000351937 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
TRIM41-202ENST00000351937 KRTAP9-2Q9BYQ4 174 aa6.78□□□□□ -1.32
TRIM41-202ENST00000351937 MT1EP04732 61 aa6.64□□□□□ -1.35
TRIM41-202ENST00000351937 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
TRIM41-202ENST00000351937 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
TRIM41-202ENST00000351937 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
TRIM41-202ENST00000351937 MT1LQ93083 61 aa6.55□□□□□ -1.36
TRIM41-202ENST00000351937 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
TRIM41-202ENST00000351937 INE1O15225 51 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms