RNA–Protein interactions for RNA: ENST00000350592.7

C1orf43-201, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-201ENST00000350592 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
C1orf43-201ENST00000350592 HMCN2Q8NDA2 5059 aa8.31□□□□□ -1.08
C1orf43-201ENST00000350592 MUC17Q685J3 4493 aa8.3□□□□□ -1.08
C1orf43-201ENST00000350592 S4R3F8 94 aa8.25□□□□□ -1.09
C1orf43-201ENST00000350592 PSPHP1O15172 72 aa8.22□□□□□ -1.09
C1orf43-201ENST00000350592 LCA10Q71F78 164 aa8.22□□□□□ -1.09
C1orf43-201ENST00000350592 PRR15LQ9BU68 103 aa8.21□□□□□ -1.09
C1orf43-201ENST00000350592 Q5VV11 94 aa8.16□□□□□ -1.1
C1orf43-201ENST00000350592 A0A1B0GU69 56 aa8.15□□□□□ -1.1
C1orf43-201ENST00000350592 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
C1orf43-201ENST00000350592 LCE2BO14633 110 aa8.11□□□□□ -1.11
C1orf43-201ENST00000350592 SEC61GP60059 68 aa8.11□□□□□ -1.11
C1orf43-201ENST00000350592 CSAG1Q6PB30 78 aa8.07□□□□□ -1.12
C1orf43-201ENST00000350592 A6NED7 52 aa7.98□□□□□ -1.13
C1orf43-201ENST00000350592 MUC2Q02817 5179 aa7.95□□□□□ -1.14
C1orf43-201ENST00000350592 H0YAA0 97 aa7.92□□□□□ -1.14
C1orf43-201ENST00000350592 UQCR11O14957 56 aa7.92□□□□□ -1.14
C1orf43-201ENST00000350592 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
C1orf43-201ENST00000350592 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
C1orf43-201ENST00000350592 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
C1orf43-201ENST00000350592 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
C1orf43-201ENST00000350592 RNF213Q63HN8 5207 aa7.9□□□□□ -1.14
C1orf43-201ENST00000350592 A0A1B0GU33 70 aa7.89□□□□□ -1.15
C1orf43-201ENST00000350592 ADM2Q7Z4H4 148 aa7.89□□□□□ -1.15
C1orf43-201ENST00000350592 CDC42SE1Q9NRR8 79 aa7.86□□□□□ -1.15
C1orf43-201ENST00000350592 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
C1orf43-201ENST00000350592 P0C880 135 aa7.84□□□□□ -1.15
C1orf43-201ENST00000350592 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
C1orf43-201ENST00000350592 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
C1orf43-201ENST00000350592 A8MU10 97 aa7.78□□□□□ -1.16
C1orf43-201ENST00000350592 PRO0628Q9UI54 55 aa7.78□□□□□ -1.16
C1orf43-201ENST00000350592 MT1HP80294 61 aa7.77□□□□□ -1.17
C1orf43-201ENST00000350592 M0R2T5 61 aa7.7□□□□□ -1.18
C1orf43-201ENST00000350592 KRTAP13-4Q3LI77 160 aa7.69□□□□□ -1.18
C1orf43-201ENST00000350592 M0QZ58 72 aa7.67□□□□□ -1.18
C1orf43-201ENST00000350592 LCE2AQ5TA79 106 aaPredicted RBP7.63□□□□□ -1.19
C1orf43-201ENST00000350592 FAT4Q6V0I7 4981 aa7.6□□□□□ -1.19
C1orf43-201ENST00000350592 R4GN34 69 aa7.6□□□□□ -1.19
C1orf43-201ENST00000350592 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
C1orf43-201ENST00000350592 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
C1orf43-201ENST00000350592 A0A0D9SG42 100 aa7.55□□□□□ -1.2
C1orf43-201ENST00000350592 PMAIP1Q13794 54 aa7.49□□□□□ -1.21
C1orf43-201ENST00000350592 KRTAP9-8Q9BYQ0 159 aa7.49□□□□□ -1.21
C1orf43-201ENST00000350592 K7ERS5 55 aa7.48□□□□□ -1.21
C1orf43-201ENST00000350592 MT2AP02795 61 aa7.47□□□□□ -1.21
C1orf43-201ENST00000350592 A6NN06 94 aa7.45□□□□□ -1.22
C1orf43-201ENST00000350592 LINC01554Q52M75 96 aa7.44□□□□□ -1.22
C1orf43-201ENST00000350592 MT1FP04733 61 aa7.42□□□□□ -1.22
C1orf43-201ENST00000350592 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
C1orf43-201ENST00000350592 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
C1orf43-201ENST00000350592 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
C1orf43-201ENST00000350592 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
C1orf43-201ENST00000350592 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
C1orf43-201ENST00000350592 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
C1orf43-201ENST00000350592 LOC100996750A0A140TA64 210 aa7.3□□□□□ -1.24
C1orf43-201ENST00000350592 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
C1orf43-201ENST00000350592 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
C1orf43-201ENST00000350592 SVIPQ8NHG7 77 aa7.22□□□□□ -1.25
C1orf43-201ENST00000350592 KTN1-AS1Q86SY8 53 aa7.2□□□□□ -1.26
C1orf43-201ENST00000350592 ROMO1P60602 79 aa7.17□□□□□ -1.26
C1orf43-201ENST00000350592 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
C1orf43-201ENST00000350592 PLAC4Q8WY50 150 aa7.13□□□□□ -1.27
C1orf43-201ENST00000350592 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
C1orf43-201ENST00000350592 MT1BP07438 61 aa7.05□□□□□ -1.28
C1orf43-201ENST00000350592 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
C1orf43-201ENST00000350592 PRAC1Q96KF2 57 aa7□□□□□ -1.29
C1orf43-201ENST00000350592 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
C1orf43-201ENST00000350592 MT1XP80297 61 aa6.83□□□□□ -1.32
C1orf43-201ENST00000350592 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
C1orf43-201ENST00000350592 TNP1P09430 55 aa6.8□□□□□ -1.32
C1orf43-201ENST00000350592 PRO2289Q9P1D8 64 aa6.78□□□□□ -1.32
C1orf43-201ENST00000350592 USH2AO75445 5202 aa6.71□□□□□ -1.33
C1orf43-201ENST00000350592 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.35
C1orf43-201ENST00000350592 PP632Q6XCG6 107 aa6.65□□□□□ -1.35
C1orf43-201ENST00000350592 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
C1orf43-201ENST00000350592 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
C1orf43-201ENST00000350592 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
C1orf43-201ENST00000350592 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
C1orf43-201ENST00000350592 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
C1orf43-201ENST00000350592 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
C1orf43-201ENST00000350592 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
C1orf43-201ENST00000350592 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
C1orf43-201ENST00000350592 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
C1orf43-201ENST00000350592 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
C1orf43-201ENST00000350592 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
C1orf43-201ENST00000350592 KRTAP4-12Q9BQ66 201 aa6.3□□□□□ -1.4
C1orf43-201ENST00000350592 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
C1orf43-201ENST00000350592 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
C1orf43-201ENST00000350592 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
C1orf43-201ENST00000350592 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.41
C1orf43-201ENST00000350592 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.41
C1orf43-201ENST00000350592 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
C1orf43-201ENST00000350592 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
C1orf43-201ENST00000350592 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
C1orf43-201ENST00000350592 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
C1orf43-201ENST00000350592 KMT2DO14686 5537 aa6.12□□□□□ -1.43
C1orf43-201ENST00000350592 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
C1orf43-201ENST00000350592 MT1EP04732 61 aa5.99□□□□□ -1.45
C1orf43-201ENST00000350592 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
C1orf43-201ENST00000350592 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms