RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 S4R3F8 94 aa10.73□□□□□ -0.69
TSPAN3-202ENST00000346495 LCA10Q71F78 164 aa10.69□□□□□ -0.7
TSPAN3-202ENST00000346495 PSPHP1O15172 72 aa10.66□□□□□ -0.7
TSPAN3-202ENST00000346495 PRR15LQ9BU68 103 aa10.66□□□□□ -0.7
TSPAN3-202ENST00000346495 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
TSPAN3-202ENST00000346495 A0A1B0GU69 56 aa10.58□□□□□ -0.72
TSPAN3-202ENST00000346495 KRTAP19-2Q3LHN2 52 aa10.57□□□□□ -0.72
TSPAN3-202ENST00000346495 Q5VV11 94 aa10.57□□□□□ -0.72
TSPAN3-202ENST00000346495 SEC61GP60059 68 aa10.53□□□□□ -0.72
TSPAN3-202ENST00000346495 CSAG1Q6PB30 78 aa10.48□□□□□ -0.73
TSPAN3-202ENST00000346495 A6NED7 52 aa10.36□□□□□ -0.75
TSPAN3-202ENST00000346495 MUC2Q02817 5179 aa10.35□□□□□ -0.75
TSPAN3-202ENST00000346495 LCE2CQ5TA81 110 aa10.31□□□□□ -0.76
TSPAN3-202ENST00000346495 RNF213Q63HN8 5207 aa10.3□□□□□ -0.76
TSPAN3-202ENST00000346495 UBR4Q5T4S7 5183 aa10.28□□□□□ -0.76
TSPAN3-202ENST00000346495 H0YAA0 97 aa10.27□□□□□ -0.77
TSPAN3-202ENST00000346495 UQCR11O14957 56 aa10.27□□□□□ -0.77
TSPAN3-202ENST00000346495 BRK1Q8WUW1 75 aa10.27□□□□□ -0.77
TSPAN3-202ENST00000346495 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
TSPAN3-202ENST00000346495 KRTAP10-6P60371 365 aaPredicted RBP10.26□□□□□ -0.77
TSPAN3-202ENST00000346495 ADM2Q7Z4H4 148 aa10.25□□□□□ -0.77
TSPAN3-202ENST00000346495 A0A1B0GU33 70 aa10.25□□□□□ -0.77
TSPAN3-202ENST00000346495 FLGP20930 4061 aaPredicted RBP10.23□□□□□ -0.77
TSPAN3-202ENST00000346495 CDC42SE1Q9NRR8 79 aa10.18□□□□□ -0.78
TSPAN3-202ENST00000346495 P0C880 135 aa10.18□□□□□ -0.78
TSPAN3-202ENST00000346495 MIR22HGQ0VDD5 57 aa10.16□□□□□ -0.78
TSPAN3-202ENST00000346495 SPATA8Q6RVD6 105 aa10.14□□□□□ -0.79
TSPAN3-202ENST00000346495 MT1HP80294 61 aa10.11□□□□□ -0.79
TSPAN3-202ENST00000346495 A8MU10 97 aa10.07□□□□□ -0.8
TSPAN3-202ENST00000346495 PRO0628Q9UI54 55 aa10.07□□□□□ -0.8
TSPAN3-202ENST00000346495 M0R2T5 61 aa10.04□□□□□ -0.8
TSPAN3-202ENST00000346495 KRTAP13-4Q3LI77 160 aa9.98□□□□□ -0.81
TSPAN3-202ENST00000346495 FAT4Q6V0I7 4981 aa9.98□□□□□ -0.81
TSPAN3-202ENST00000346495 M0QZ58 72 aa9.96□□□□□ -0.81
TSPAN3-202ENST00000346495 R4GN34 69 aa9.89□□□□□ -0.83
TSPAN3-202ENST00000346495 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
TSPAN3-202ENST00000346495 A0A0D9SG42 100 aa9.82□□□□□ -0.84
TSPAN3-202ENST00000346495 CRIPTQ9P021 101 aa9.82□□□□□ -0.84
TSPAN3-202ENST00000346495 KRTAP9-8Q9BYQ0 159 aa9.74□□□□□ -0.85
TSPAN3-202ENST00000346495 K7ERS5 55 aa9.72□□□□□ -0.85
TSPAN3-202ENST00000346495 MT2AP02795 61 aa9.72□□□□□ -0.85
TSPAN3-202ENST00000346495 PMAIP1Q13794 54 aa9.71□□□□□ -0.86
TSPAN3-202ENST00000346495 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
TSPAN3-202ENST00000346495 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
TSPAN3-202ENST00000346495 MT1FP04733 61 aa9.66□□□□□ -0.86
TSPAN3-202ENST00000346495 KRTAP10-10P60014 251 aa9.66□□□□□ -0.86
TSPAN3-202ENST00000346495 A6NN06 94 aa9.64□□□□□ -0.87
TSPAN3-202ENST00000346495 KRTAP12-1P59990 96 aa9.63□□□□□ -0.87
TSPAN3-202ENST00000346495 SPINT4Q6UDR6 99 aa9.6□□□□□ -0.87
TSPAN3-202ENST00000346495 KRTAP12-2P59991 146 aa9.6□□□□□ -0.87
TSPAN3-202ENST00000346495 SPRR2GQ9BYE4 73 aa9.56□□□□□ -0.88
TSPAN3-202ENST00000346495 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
TSPAN3-202ENST00000346495 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
TSPAN3-202ENST00000346495 KTN1-AS1Q86SY8 53 aa9.32□□□□□ -0.92
TSPAN3-202ENST00000346495 KRTAP19-8Q3LI54 63 aa9.31□□□□□ -0.92
TSPAN3-202ENST00000346495 ROMO1P60602 79 aa9.31□□□□□ -0.92
TSPAN3-202ENST00000346495 PLAC4Q8WY50 150 aa9.29□□□□□ -0.92
TSPAN3-202ENST00000346495 CAMK2N1Q7Z7J9 78 aa9.27□□□□□ -0.92
TSPAN3-202ENST00000346495 SVIPQ8NHG7 77 aa9.27□□□□□ -0.92
TSPAN3-202ENST00000346495 MT1BP07438 61 aa9.16□□□□□ -0.94
TSPAN3-202ENST00000346495 LCE2BO14633 110 aa9.1□□□□□ -0.95
TSPAN3-202ENST00000346495 C10orf95Q9H7T3 257 aa9.1□□□□□ -0.95
TSPAN3-202ENST00000346495 PRAC1Q96KF2 57 aa9.07□□□□□ -0.96
TSPAN3-202ENST00000346495 KRTAP25-1Q3LHN0 102 aa8.9□□□□□ -0.99
TSPAN3-202ENST00000346495 MT1XP80297 61 aa8.87□□□□□ -0.99
TSPAN3-202ENST00000346495 KRTAP10-5P60370 271 aa8.87□□□□□ -0.99
TSPAN3-202ENST00000346495 TNP1P09430 55 aa8.84□□□□□ -0.99
TSPAN3-202ENST00000346495 PRO2289Q9P1D8 64 aa8.83□□□□□ -1
TSPAN3-202ENST00000346495 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
TSPAN3-202ENST00000346495 USH2AO75445 5202 aa8.74□□□□□ -1.01
TSPAN3-202ENST00000346495 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
TSPAN3-202ENST00000346495 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
TSPAN3-202ENST00000346495 KRTAP19-6Q3LI70 58 aa8.56□□□□□ -1.04
TSPAN3-202ENST00000346495 KRTAP10-7P60409 375 aaPredicted RBP8.52□□□□□ -1.05
TSPAN3-202ENST00000346495 SSPOA2VEC9 5147 aa8.49□□□□□ -1.05
TSPAN3-202ENST00000346495 KRTAP10-12P60413 245 aa8.46□□□□□ -1.06
TSPAN3-202ENST00000346495 KRTAP9-2Q9BYQ4 174 aa8.43□□□□□ -1.06
TSPAN3-202ENST00000346495 LCE3AQ5TA76 89 aa8.43□□□□□ -1.06
TSPAN3-202ENST00000346495 FSIP2Q5CZC0 6907 aa8.3□□□□□ -1.08
TSPAN3-202ENST00000346495 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
TSPAN3-202ENST00000346495 KRTAP4-8A0A0G2JLE6 195 aa8.16□□□□□ -1.1
TSPAN3-202ENST00000346495 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
TSPAN3-202ENST00000346495 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
TSPAN3-202ENST00000346495 KRTAP12-3P60328 96 aa8.11□□□□□ -1.11
TSPAN3-202ENST00000346495 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
TSPAN3-202ENST00000346495 KRTAP9-6A0A140TA67 174 aa8.05□□□□□ -1.12
TSPAN3-202ENST00000346495 KRTAP19-5Q3LI72 72 aa8.04□□□□□ -1.12
TSPAN3-202ENST00000346495 KMT2DO14686 5537 aa7.98□□□□□ -1.13
TSPAN3-202ENST00000346495 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.13
TSPAN3-202ENST00000346495 KRTAP19-7Q3SYF9 63 aa7.92□□□□□ -1.14
TSPAN3-202ENST00000346495 MT1EP04732 61 aa7.78□□□□□ -1.16
TSPAN3-202ENST00000346495 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
TSPAN3-202ENST00000346495 MT1LQ93083 61 aa7.63□□□□□ -1.19
TSPAN3-202ENST00000346495 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
TSPAN3-202ENST00000346495 KRTAP19-4Q3LI73 84 aa7.63□□□□□ -1.19
TSPAN3-202ENST00000346495 SPRR2FQ96RM1 72 aa7.6□□□□□ -1.19
TSPAN3-202ENST00000346495 LCE3CQ5T5A8 94 aa7.58□□□□□ -1.2
TSPAN3-202ENST00000346495 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-202ENST00000346495 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
TSPAN3-202ENST00000346495 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms