RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 KRTAP10-10P60014 251 aa11.09□□□□□ -0.63
MADCAM1-202ENST00000346144 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
MADCAM1-202ENST00000346144 SNURFQ9Y675 71 aa11.06□□□□□ -0.64
MADCAM1-202ENST00000346144 C20orf197Q8N268 126 aa11.05□□□□□ -0.64
MADCAM1-202ENST00000346144 DMAC1Q96GE9 116 aa11.05□□□□□ -0.64
MADCAM1-202ENST00000346144 NDUFC1O43677 76 aa10.98□□□□□ -0.65
MADCAM1-202ENST00000346144 COX7CP15954 63 aa10.96□□□□□ -0.65
MADCAM1-202ENST00000346144 KRTAP9-3Q9BYQ3 159 aa10.95□□□□□ -0.66
MADCAM1-202ENST00000346144 SPANXA2-OT1Q8N9U9 137 aa10.87□□□□□ -0.67
MADCAM1-202ENST00000346144 ACYP2P14621 99 aa10.86□□□□□ -0.67
MADCAM1-202ENST00000346144 ANAPC13Q9BS18 74 aa10.84□□□□□ -0.67
MADCAM1-202ENST00000346144 USH2AO75445 5202 aa10.84□□□□□ -0.67
MADCAM1-202ENST00000346144 SSPOA2VEC9 5147 aa10.8□□□□□ -0.68
MADCAM1-202ENST00000346144 LCE2BO14633 110 aa10.78□□□□□ -0.68
MADCAM1-202ENST00000346144 H0YAA0 97 aa10.77□□□□□ -0.69
MADCAM1-202ENST00000346144 CYSTM1Q9H1C7 97 aa10.71□□□□□ -0.69
MADCAM1-202ENST00000346144 H7BZZ5 65 aa10.69□□□□□ -0.7
MADCAM1-202ENST00000346144 CHKB-CPT1BH3BT56 60 aa10.66□□□□□ -0.7
MADCAM1-202ENST00000346144 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
MADCAM1-202ENST00000346144 SPTSSBQ8NFR3 76 aa10.64□□□□□ -0.71
MADCAM1-202ENST00000346144 KRTAP19-1Q8IUB9 90 aa10.62□□□□□ -0.71
MADCAM1-202ENST00000346144 CCDC179H3BU77 68 aa10.6□□□□□ -0.71
MADCAM1-202ENST00000346144 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
MADCAM1-202ENST00000346144 SPRR2GQ9BYE4 73 aa10.58□□□□□ -0.71
MADCAM1-202ENST00000346144 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.57□□□□□ -0.72
MADCAM1-202ENST00000346144 FCGBPQ9Y6R7 5405 aaPredicted RBP10.54□□□□□ -0.72
MADCAM1-202ENST00000346144 COA5Q86WW8 74 aa10.53□□□□□ -0.72
MADCAM1-202ENST00000346144 KRTAP9-7A8MTY7 169 aa10.48□□□□□ -0.73
MADCAM1-202ENST00000346144 P0C880 135 aa10.47□□□□□ -0.73
MADCAM1-202ENST00000346144 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
MADCAM1-202ENST00000346144 KRTAP19-8Q3LI54 63 aa10.43□□□□□ -0.74
MADCAM1-202ENST00000346144 Q5VV11 94 aa10.38□□□□□ -0.75
MADCAM1-202ENST00000346144 MT1BP07438 61 aa10.35□□□□□ -0.75
MADCAM1-202ENST00000346144 ATP5EP56381 51 aaPredicted RBP10.34□□□□□ -0.75
MADCAM1-202ENST00000346144 R4GN34 69 aa10.33□□□□□ -0.76
MADCAM1-202ENST00000346144 KRTAP19-6Q3LI70 58 aa10.33□□□□□ -0.76
MADCAM1-202ENST00000346144 M0QZ58 72 aa10.28□□□□□ -0.76
MADCAM1-202ENST00000346144 TMEM258P61165 79 aa10.26□□□□□ -0.77
MADCAM1-202ENST00000346144 MACF1Q9UPN3 7388 aaKnown RBP10.19□□□□□ -0.78
MADCAM1-202ENST00000346144 SEC61GP60059 68 aa10.14□□□□□ -0.79
MADCAM1-202ENST00000346144 SERP1Q9Y6X1 66 aa10.11□□□□□ -0.79
MADCAM1-202ENST00000346144 SYNE2Q8WXH0 6885 aaKnown RBP10.1□□□□□ -0.79
MADCAM1-202ENST00000346144 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
MADCAM1-202ENST00000346144 PLAC4Q8WY50 150 aa10.04□□□□□ -0.8
MADCAM1-202ENST00000346144 A6NN06 94 aa10.03□□□□□ -0.8
MADCAM1-202ENST00000346144 KRTAP10-5P60370 271 aa10.02□□□□□ -0.81
MADCAM1-202ENST00000346144 KRTAP13-4Q3LI77 160 aa9.99□□□□□ -0.81
MADCAM1-202ENST00000346144 A0A1B0GU69 56 aa9.98□□□□□ -0.81
MADCAM1-202ENST00000346144 A0A1B0GU33 70 aa9.92□□□□□ -0.82
MADCAM1-202ENST00000346144 PCP4P48539 62 aa9.92□□□□□ -0.82
MADCAM1-202ENST00000346144 LINC01558Q9Y6Z2 57 aa9.85□□□□□ -0.83
MADCAM1-202ENST00000346144 PRO2289Q9P1D8 64 aa9.84□□□□□ -0.83
MADCAM1-202ENST00000346144 MT1XP80297 61 aa9.83□□□□□ -0.84
MADCAM1-202ENST00000346144 PRR15LQ9BU68 103 aa9.83□□□□□ -0.84
MADCAM1-202ENST00000346144 SPATA8Q6RVD6 105 aa9.82□□□□□ -0.84
MADCAM1-202ENST00000346144 KRTAP6-3Q3LI67 103 aa9.8□□□□□ -0.84
MADCAM1-202ENST00000346144 A0A0D9SG42 100 aa9.72□□□□□ -0.85
MADCAM1-202ENST00000346144 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
MADCAM1-202ENST00000346144 V9GYY9 64 aa9.6□□□□□ -0.87
MADCAM1-202ENST00000346144 MUC12Q9UKN1 5478 aa9.59□□□□□ -0.87
MADCAM1-202ENST00000346144 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
MADCAM1-202ENST00000346144 KRTAP12-1P59990 96 aa9.56□□□□□ -0.88
MADCAM1-202ENST00000346144 Q1T7F1 81 aa9.56□□□□□ -0.88
MADCAM1-202ENST00000346144 A8MU10 97 aa9.56□□□□□ -0.88
MADCAM1-202ENST00000346144 SPINT4Q6UDR6 99 aa9.56□□□□□ -0.88
MADCAM1-202ENST00000346144 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
MADCAM1-202ENST00000346144 NEBP20929 6669 aa9.52□□□□□ -0.89
MADCAM1-202ENST00000346144 UQCR11O14957 56 aa9.52□□□□□ -0.89
MADCAM1-202ENST00000346144 KRTAP12-2P59991 146 aa9.51□□□□□ -0.89
MADCAM1-202ENST00000346144 PSPHP1O15172 72 aa9.45□□□□□ -0.9
MADCAM1-202ENST00000346144 KRTAP10-7P60409 375 aaPredicted RBP9.38□□□□□ -0.91
MADCAM1-202ENST00000346144 KRTAP10-12P60413 245 aa9.35□□□□□ -0.91
MADCAM1-202ENST00000346144 MIR22HGQ0VDD5 57 aa9.34□□□□□ -0.91
MADCAM1-202ENST00000346144 KRTAP5-9P26371 169 aa9.31□□□□□ -0.92
MADCAM1-202ENST00000346144 KMT2DO14686 5537 aa9.29□□□□□ -0.92
MADCAM1-202ENST00000346144 MDN1Q9NU22 5596 aa9.29□□□□□ -0.92
MADCAM1-202ENST00000346144 KRTAP4-8A0A0G2JLE6 195 aa9.23□□□□□ -0.93
MADCAM1-202ENST00000346144 KRTAP8-1Q8IUC2 63 aa9.23□□□□□ -0.93
MADCAM1-202ENST00000346144 KRTAP4-8Q9BYQ9 185 aa9.23□□□□□ -0.93
MADCAM1-202ENST00000346144 A6NED7 52 aa9.16□□□□□ -0.94
MADCAM1-202ENST00000346144 KRTAP20-1Q3LI63 56 aa9.15□□□□□ -0.94
MADCAM1-202ENST00000346144 C10orf95Q9H7T3 257 aa9.09□□□□□ -0.95
MADCAM1-202ENST00000346144 SPRR2FQ96RM1 72 aa9.08□□□□□ -0.96
MADCAM1-202ENST00000346144 K7ERS5 55 aa9.06□□□□□ -0.96
MADCAM1-202ENST00000346144 TNP1P09430 55 aa8.97□□□□□ -0.97
MADCAM1-202ENST00000346144 CDC42SE1Q9NRR8 79 aa8.88□□□□□ -0.99
MADCAM1-202ENST00000346144 SPRR2EP22531 72 aa8.84□□□□□ -0.99
MADCAM1-202ENST00000346144 SPRR2BP35325 72 aa8.84□□□□□ -0.99
MADCAM1-202ENST00000346144 SPRR2AP35326 72 aa8.84□□□□□ -0.99
MADCAM1-202ENST00000346144 KRTAP2-3P0C7H8 128 aa8.83□□□□□ -1
MADCAM1-202ENST00000346144 KRTAP2-4Q9BYR9 128 aa8.83□□□□□ -1
MADCAM1-202ENST00000346144 LCE1AQ5T7P2 110 aa8.8□□□□□ -1
MADCAM1-202ENST00000346144 KRTAP19-7Q3SYF9 63 aa8.79□□□□□ -1
MADCAM1-202ENST00000346144 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
MADCAM1-202ENST00000346144 KRTAP25-1Q3LHN0 102 aa8.73□□□□□ -1.01
MADCAM1-202ENST00000346144 KRTAP19-5Q3LI72 72 aa8.69□□□□□ -1.02
MADCAM1-202ENST00000346144 MT1EP04732 61 aa8.68□□□□□ -1.02
MADCAM1-202ENST00000346144 SPRR2DP22532 72 aa8.55□□□□□ -1.04
MADCAM1-202ENST00000346144 ROMO1P60602 79 aa8.55□□□□□ -1.04
MADCAM1-202ENST00000346144 KRTAP2-2Q9BYT5 123 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms