RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.61
AC008543.1-201ENST00000344893 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
AC008543.1-201ENST00000344893 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
AC008543.1-201ENST00000344893 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
AC008543.1-201ENST00000344893 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
AC008543.1-201ENST00000344893 KRTAP1-4P0C5Y4 121 aa4.91□□□□□ -1.62
AC008543.1-201ENST00000344893 TPRXLQ17RH7 258 aa4.9□□□□□ -1.62
AC008543.1-201ENST00000344893 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
AC008543.1-201ENST00000344893 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
AC008543.1-201ENST00000344893 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
AC008543.1-201ENST00000344893 RYR1P21817 5038 aa4.88□□□□□ -1.63
AC008543.1-201ENST00000344893 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
AC008543.1-201ENST00000344893 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
AC008543.1-201ENST00000344893 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
AC008543.1-201ENST00000344893 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
AC008543.1-201ENST00000344893 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
AC008543.1-201ENST00000344893 HSPG2P98160 4391 aa4.83□□□□□ -1.64
AC008543.1-201ENST00000344893 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
AC008543.1-201ENST00000344893 KRTAP3-1Q9BYR8 98 aa4.82□□□□□ -1.64
AC008543.1-201ENST00000344893 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
AC008543.1-201ENST00000344893 J3QL48 77 aa4.81□□□□□ -1.64
AC008543.1-201ENST00000344893 A0A0D9SG42 100 aa4.78□□□□□ -1.64
AC008543.1-201ENST00000344893 KRTAP13-4Q3LI77 160 aa4.73□□□□□ -1.65
AC008543.1-201ENST00000344893 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
AC008543.1-201ENST00000344893 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
AC008543.1-201ENST00000344893 HERC2O95714 4834 aa4.71□□□□□ -1.66
AC008543.1-201ENST00000344893 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
AC008543.1-201ENST00000344893 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
AC008543.1-201ENST00000344893 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.66
AC008543.1-201ENST00000344893 MT1HL1P0DM35 61 aa4.65□□□□□ -1.66
AC008543.1-201ENST00000344893 S4R3F8 94 aa4.65□□□□□ -1.67
AC008543.1-201ENST00000344893 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
AC008543.1-201ENST00000344893 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
AC008543.1-201ENST00000344893 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
AC008543.1-201ENST00000344893 HERC1Q15751 4861 aa4.6□□□□□ -1.67
AC008543.1-201ENST00000344893 LPAP08519 4548 aa4.59□□□□□ -1.67
AC008543.1-201ENST00000344893 LRP2P98164 4655 aa4.59□□□□□ -1.67
AC008543.1-201ENST00000344893 XP32Q5T750 250 aa4.57□□□□□ -1.68
AC008543.1-201ENST00000344893 TNXBP22105 4242 aa4.54□□□□□ -1.68
AC008543.1-201ENST00000344893 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
AC008543.1-201ENST00000344893 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
AC008543.1-201ENST00000344893 MUC2Q02817 5179 aa4.5□□□□□ -1.69
AC008543.1-201ENST00000344893 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
AC008543.1-201ENST00000344893 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
AC008543.1-201ENST00000344893 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
AC008543.1-201ENST00000344893 SEC61BP60468 96 aaKnown RBP4.36□□□□□ -1.71
AC008543.1-201ENST00000344893 M0QZ58 72 aa4.35□□□□□ -1.71
AC008543.1-201ENST00000344893 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
AC008543.1-201ENST00000344893 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
AC008543.1-201ENST00000344893 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
AC008543.1-201ENST00000344893 M0R2T5 61 aa4.24□□□□□ -1.73
AC008543.1-201ENST00000344893 LCE2BO14633 110 aa4.23□□□□□ -1.73
AC008543.1-201ENST00000344893 R4GN34 69 aa4.2□□□□□ -1.74
AC008543.1-201ENST00000344893 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
AC008543.1-201ENST00000344893 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
AC008543.1-201ENST00000344893 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.76
AC008543.1-201ENST00000344893 LORP23490 312 aaPredicted RBP4.08□□□□□ -1.76
AC008543.1-201ENST00000344893 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
AC008543.1-201ENST00000344893 MUC17Q685J3 4493 aa4.05□□□□□ -1.76
AC008543.1-201ENST00000344893 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
AC008543.1-201ENST00000344893 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
AC008543.1-201ENST00000344893 KRTAP10-10P60014 251 aa3.95□□□□□ -1.78
AC008543.1-201ENST00000344893 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
AC008543.1-201ENST00000344893 MT1HP80294 61 aa3.94□□□□□ -1.78
AC008543.1-201ENST00000344893 TNP1P09430 55 aa3.93□□□□□ -1.78
AC008543.1-201ENST00000344893 INE1O15225 51 aa3.92□□□□□ -1.78
AC008543.1-201ENST00000344893 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
AC008543.1-201ENST00000344893 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
AC008543.1-201ENST00000344893 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
AC008543.1-201ENST00000344893 USH2AO75445 5202 aa3.84□□□□□ -1.79
AC008543.1-201ENST00000344893 MT1FP04733 61 aa3.81□□□□□ -1.8
AC008543.1-201ENST00000344893 MT2AP02795 61 aa3.8□□□□□ -1.8
AC008543.1-201ENST00000344893 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
AC008543.1-201ENST00000344893 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
AC008543.1-201ENST00000344893 KRTAP19-1Q8IUB9 90 aa3.67□□□□□ -1.82
AC008543.1-201ENST00000344893 KRTAP9-3Q9BYQ3 159 aa3.59□□□□□ -1.83
AC008543.1-201ENST00000344893 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
AC008543.1-201ENST00000344893 KMT2DO14686 5537 aa3.56□□□□□ -1.84
AC008543.1-201ENST00000344893 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
AC008543.1-201ENST00000344893 MT1BP07438 61 aa3.53□□□□□ -1.84
AC008543.1-201ENST00000344893 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
AC008543.1-201ENST00000344893 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
AC008543.1-201ENST00000344893 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
AC008543.1-201ENST00000344893 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
AC008543.1-201ENST00000344893 MT1XP80297 61 aa3.43□□□□□ -1.86
AC008543.1-201ENST00000344893 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
AC008543.1-201ENST00000344893 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.86
AC008543.1-201ENST00000344893 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
AC008543.1-201ENST00000344893 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
AC008543.1-201ENST00000344893 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
AC008543.1-201ENST00000344893 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
AC008543.1-201ENST00000344893 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
AC008543.1-201ENST00000344893 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
AC008543.1-201ENST00000344893 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
AC008543.1-201ENST00000344893 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
AC008543.1-201ENST00000344893 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
AC008543.1-201ENST00000344893 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
AC008543.1-201ENST00000344893 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
AC008543.1-201ENST00000344893 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
AC008543.1-201ENST00000344893 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms