RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 COA5Q86WW8 74 aa9.51□□□□□ -0.89
GTF3C5-201ENST00000342018 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
GTF3C5-201ENST00000342018 LCA10Q71F78 164 aa9.5□□□□□ -0.89
GTF3C5-201ENST00000342018 FAT4Q6V0I7 4981 aa9.49□□□□□ -0.89
GTF3C5-201ENST00000342018 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
GTF3C5-201ENST00000342018 MT1HP80294 61 aa9.42□□□□□ -0.9
GTF3C5-201ENST00000342018 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
GTF3C5-201ENST00000342018 M0R2T5 61 aa9.39□□□□□ -0.91
GTF3C5-201ENST00000342018 CSAG1Q6PB30 78 aa9.33□□□□□ -0.92
GTF3C5-201ENST00000342018 Q1T7F1 81 aa9.33□□□□□ -0.92
GTF3C5-201ENST00000342018 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
GTF3C5-201ENST00000342018 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
GTF3C5-201ENST00000342018 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
GTF3C5-201ENST00000342018 V9GYY9 64 aa9.2□□□□□ -0.94
GTF3C5-201ENST00000342018 PSPHP1O15172 72 aa9.15□□□□□ -0.94
GTF3C5-201ENST00000342018 KRTAP10-6P60371 365 aaPredicted RBP9.11□□□□□ -0.95
GTF3C5-201ENST00000342018 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
GTF3C5-201ENST00000342018 PRO0628Q9UI54 55 aa9.08□□□□□ -0.96
GTF3C5-201ENST00000342018 Q5VV11 94 aa9.07□□□□□ -0.96
GTF3C5-201ENST00000342018 BRK1Q8WUW1 75 aa9.07□□□□□ -0.96
GTF3C5-201ENST00000342018 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
GTF3C5-201ENST00000342018 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
GTF3C5-201ENST00000342018 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
GTF3C5-201ENST00000342018 H0YAA0 97 aa9.03□□□□□ -0.96
GTF3C5-201ENST00000342018 SEC61GP60059 68 aa9.03□□□□□ -0.96
GTF3C5-201ENST00000342018 KRTAP9-8Q9BYQ0 159 aa9.01□□□□□ -0.97
GTF3C5-201ENST00000342018 A0A1B0GU69 56 aa9.01□□□□□ -0.97
GTF3C5-201ENST00000342018 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
GTF3C5-201ENST00000342018 P0C880 135 aa8.99□□□□□ -0.97
GTF3C5-201ENST00000342018 MT2AP02795 61 aa8.98□□□□□ -0.97
GTF3C5-201ENST00000342018 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
GTF3C5-201ENST00000342018 MT1FP04733 61 aa8.93□□□□□ -0.98
GTF3C5-201ENST00000342018 A8MU10 97 aa8.84□□□□□ -0.99
GTF3C5-201ENST00000342018 A6NED7 52 aa8.83□□□□□ -1
GTF3C5-201ENST00000342018 A0A1B0GU33 70 aa8.81□□□□□ -1
GTF3C5-201ENST00000342018 R4GN34 69 aa8.78□□□□□ -1
GTF3C5-201ENST00000342018 M0QZ58 72 aa8.76□□□□□ -1.01
GTF3C5-201ENST00000342018 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
GTF3C5-201ENST00000342018 CRIPTQ9P021 101 aa8.74□□□□□ -1.01
GTF3C5-201ENST00000342018 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
GTF3C5-201ENST00000342018 SPATA8Q6RVD6 105 aa8.72□□□□□ -1.01
GTF3C5-201ENST00000342018 KRTAP9-3Q9BYQ3 159 aa8.7□□□□□ -1.02
GTF3C5-201ENST00000342018 UQCR11O14957 56 aa8.66□□□□□ -1.02
GTF3C5-201ENST00000342018 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
GTF3C5-201ENST00000342018 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
GTF3C5-201ENST00000342018 SPRR2GQ9BYE4 73 aa8.63□□□□□ -1.03
GTF3C5-201ENST00000342018 A0A0D9SG42 100 aa8.6□□□□□ -1.03
GTF3C5-201ENST00000342018 PMAIP1Q13794 54 aa8.57□□□□□ -1.04
GTF3C5-201ENST00000342018 MIR22HGQ0VDD5 57 aa8.56□□□□□ -1.04
GTF3C5-201ENST00000342018 LCE2BO14633 110 aa8.52□□□□□ -1.04
GTF3C5-201ENST00000342018 A6NN06 94 aa8.5□□□□□ -1.05
GTF3C5-201ENST00000342018 KRTAP19-8Q3LI54 63 aa8.44□□□□□ -1.06
GTF3C5-201ENST00000342018 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
GTF3C5-201ENST00000342018 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
GTF3C5-201ENST00000342018 MT1BP07438 61 aa8.38□□□□□ -1.07
GTF3C5-201ENST00000342018 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
GTF3C5-201ENST00000342018 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
GTF3C5-201ENST00000342018 KRTAP12-2P59991 146 aa8.35□□□□□ -1.07
GTF3C5-201ENST00000342018 KTN1-AS1Q86SY8 53 aa8.35□□□□□ -1.07
GTF3C5-201ENST00000342018 USH2AO75445 5202 aa8.33□□□□□ -1.08
GTF3C5-201ENST00000342018 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
GTF3C5-201ENST00000342018 FSIP2Q5CZC0 6907 aa8.22□□□□□ -1.09
GTF3C5-201ENST00000342018 K7ERS5 55 aa8.22□□□□□ -1.09
GTF3C5-201ENST00000342018 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.09
GTF3C5-201ENST00000342018 SSPOA2VEC9 5147 aa8.11□□□□□ -1.11
GTF3C5-201ENST00000342018 MT1XP80297 61 aa8.05□□□□□ -1.12
GTF3C5-201ENST00000342018 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
GTF3C5-201ENST00000342018 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
GTF3C5-201ENST00000342018 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
GTF3C5-201ENST00000342018 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
GTF3C5-201ENST00000342018 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
GTF3C5-201ENST00000342018 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
GTF3C5-201ENST00000342018 ROMO1P60602 79 aa7.83□□□□□ -1.16
GTF3C5-201ENST00000342018 FCGBPQ9Y6R7 5405 aaPredicted RBP7.82□□□□□ -1.16
GTF3C5-201ENST00000342018 KRTAP9-6A0A140TA67 174 aa7.76□□□□□ -1.17
GTF3C5-201ENST00000342018 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
GTF3C5-201ENST00000342018 TNP1P09430 55 aa7.74□□□□□ -1.17
GTF3C5-201ENST00000342018 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
GTF3C5-201ENST00000342018 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
GTF3C5-201ENST00000342018 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
GTF3C5-201ENST00000342018 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
GTF3C5-201ENST00000342018 KMT2DO14686 5537 aa7.52□□□□□ -1.21
GTF3C5-201ENST00000342018 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
GTF3C5-201ENST00000342018 MACF1Q9UPN3 7388 aaKnown RBP7.44□□□□□ -1.22
GTF3C5-201ENST00000342018 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
GTF3C5-201ENST00000342018 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
GTF3C5-201ENST00000342018 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
GTF3C5-201ENST00000342018 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
GTF3C5-201ENST00000342018 SYNE2Q8WXH0 6885 aaKnown RBP7.29□□□□□ -1.24
GTF3C5-201ENST00000342018 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
GTF3C5-201ENST00000342018 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
GTF3C5-201ENST00000342018 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
GTF3C5-201ENST00000342018 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
GTF3C5-201ENST00000342018 KRTAP6-3Q3LI67 103 aa7.11□□□□□ -1.27
GTF3C5-201ENST00000342018 KRTAP5-9P26371 169 aa7.09□□□□□ -1.27
GTF3C5-201ENST00000342018 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
GTF3C5-201ENST00000342018 MT1EP04732 61 aa7.07□□□□□ -1.28
GTF3C5-201ENST00000342018 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
GTF3C5-201ENST00000342018 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
GTF3C5-201ENST00000342018 MT1LQ93083 61 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms