RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CHKB-CPT1BH3BT56 60 aa8.96□□□□□ -0.97
CLDN4-201ENST00000340958 LINC01558Q9Y6Z2 57 aa8.96□□□□□ -0.98
CLDN4-201ENST00000340958 ACYP2P14621 99 aa8.95□□□□□ -0.98
CLDN4-201ENST00000340958 DMAC1Q96GE9 116 aa8.95□□□□□ -0.98
CLDN4-201ENST00000340958 A8MU10 97 aa8.93□□□□□ -0.98
CLDN4-201ENST00000340958 SEC61GP60059 68 aa8.91□□□□□ -0.98
CLDN4-201ENST00000340958 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
CLDN4-201ENST00000340958 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
CLDN4-201ENST00000340958 LCA10Q71F78 164 aa8.87□□□□□ -0.99
CLDN4-201ENST00000340958 CDC42SE1Q9NRR8 79 aa8.86□□□□□ -0.99
CLDN4-201ENST00000340958 A6NED7 52 aa8.84□□□□□ -0.99
CLDN4-201ENST00000340958 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
CLDN4-201ENST00000340958 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
CLDN4-201ENST00000340958 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
CLDN4-201ENST00000340958 FAT4Q6V0I7 4981 aa8.74□□□□□ -1.01
CLDN4-201ENST00000340958 A6NN06 94 aa8.74□□□□□ -1.01
CLDN4-201ENST00000340958 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
CLDN4-201ENST00000340958 SPTSSBQ8NFR3 76 aa8.73□□□□□ -1.01
CLDN4-201ENST00000340958 S4R3F8 94 aa8.68□□□□□ -1.02
CLDN4-201ENST00000340958 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
CLDN4-201ENST00000340958 A0A1B0GU69 56 aa8.57□□□□□ -1.04
CLDN4-201ENST00000340958 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
CLDN4-201ENST00000340958 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
CLDN4-201ENST00000340958 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
CLDN4-201ENST00000340958 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
CLDN4-201ENST00000340958 CSAG1Q6PB30 78 aa8.49□□□□□ -1.05
CLDN4-201ENST00000340958 UQCR11O14957 56 aa8.43□□□□□ -1.06
CLDN4-201ENST00000340958 MIR22HGQ0VDD5 57 aa8.4□□□□□ -1.06
CLDN4-201ENST00000340958 MT1HP80294 61 aa8.39□□□□□ -1.07
CLDN4-201ENST00000340958 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-201ENST00000340958 M0R2T5 61 aa8.33□□□□□ -1.08
CLDN4-201ENST00000340958 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
CLDN4-201ENST00000340958 H0YAA0 97 aa8.22□□□□□ -1.09
CLDN4-201ENST00000340958 PRAC1Q96KF2 57 aa8.22□□□□□ -1.09
CLDN4-201ENST00000340958 A0A1B0GU33 70 aa8.19□□□□□ -1.1
CLDN4-201ENST00000340958 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
CLDN4-201ENST00000340958 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
CLDN4-201ENST00000340958 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
CLDN4-201ENST00000340958 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
CLDN4-201ENST00000340958 P0C880 135 aa8.17□□□□□ -1.1
CLDN4-201ENST00000340958 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
CLDN4-201ENST00000340958 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
CLDN4-201ENST00000340958 R4GN34 69 aa8.03□□□□□ -1.12
CLDN4-201ENST00000340958 M0QZ58 72 aa8□□□□□ -1.13
CLDN4-201ENST00000340958 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
CLDN4-201ENST00000340958 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.13
CLDN4-201ENST00000340958 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
CLDN4-201ENST00000340958 A0A0D9SG42 100 aa7.93□□□□□ -1.14
CLDN4-201ENST00000340958 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
CLDN4-201ENST00000340958 FSIP2Q5CZC0 6907 aa7.91□□□□□ -1.14
CLDN4-201ENST00000340958 MT2AP02795 61 aa7.91□□□□□ -1.14
CLDN4-201ENST00000340958 MT1FP04733 61 aa7.87□□□□□ -1.15
CLDN4-201ENST00000340958 K7ERS5 55 aa7.86□□□□□ -1.15
CLDN4-201ENST00000340958 KRTAP25-1Q3LHN0 102 aa7.85□□□□□ -1.15
CLDN4-201ENST00000340958 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
CLDN4-201ENST00000340958 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
CLDN4-201ENST00000340958 CRCT1Q9UGL9 99 aa7.75□□□□□ -1.17
CLDN4-201ENST00000340958 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
CLDN4-201ENST00000340958 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.18
CLDN4-201ENST00000340958 USH2AO75445 5202 aa7.69□□□□□ -1.18
CLDN4-201ENST00000340958 ROMO1P60602 79 aa7.68□□□□□ -1.18
CLDN4-201ENST00000340958 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
CLDN4-201ENST00000340958 KRTAP12-1P59990 96 aa7.67□□□□□ -1.18
CLDN4-201ENST00000340958 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
CLDN4-201ENST00000340958 LCE2BO14633 110 aa7.64□□□□□ -1.19
CLDN4-201ENST00000340958 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
CLDN4-201ENST00000340958 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
CLDN4-201ENST00000340958 H3BS24 57 aa7.55□□□□□ -1.2
CLDN4-201ENST00000340958 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
CLDN4-201ENST00000340958 KRTAP19-8Q3LI54 63 aa7.5□□□□□ -1.21
CLDN4-201ENST00000340958 MT1BP07438 61 aa7.4□□□□□ -1.23
CLDN4-201ENST00000340958 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
CLDN4-201ENST00000340958 FCGBPQ9Y6R7 5405 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-201ENST00000340958 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
CLDN4-201ENST00000340958 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
CLDN4-201ENST00000340958 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.26
CLDN4-201ENST00000340958 KRTAP15-1Q3LI76 137 aa7.19□□□□□ -1.26
CLDN4-201ENST00000340958 MT1XP80297 61 aa7.17□□□□□ -1.26
CLDN4-201ENST00000340958 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
CLDN4-201ENST00000340958 TNP1P09430 55 aa7.12□□□□□ -1.27
CLDN4-201ENST00000340958 MACF1Q9UPN3 7388 aaKnown RBP7.11□□□□□ -1.27
CLDN4-201ENST00000340958 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
CLDN4-201ENST00000340958 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
CLDN4-201ENST00000340958 NDUFAF8A1L188 74 aa6.98□□□□□ -1.29
CLDN4-201ENST00000340958 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
CLDN4-201ENST00000340958 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
CLDN4-201ENST00000340958 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
CLDN4-201ENST00000340958 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
CLDN4-201ENST00000340958 KRTAP6-3Q3LI67 103 aa6.8□□□□□ -1.32
CLDN4-201ENST00000340958 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
CLDN4-201ENST00000340958 KMT2DO14686 5537 aa6.68□□□□□ -1.34
CLDN4-201ENST00000340958 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
CLDN4-201ENST00000340958 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
CLDN4-201ENST00000340958 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
CLDN4-201ENST00000340958 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
CLDN4-201ENST00000340958 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
CLDN4-201ENST00000340958 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
CLDN4-201ENST00000340958 NEBP20929 6669 aa6.54□□□□□ -1.36
CLDN4-201ENST00000340958 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
CLDN4-201ENST00000340958 KRTAP19-5Q3LI72 72 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms