RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 UQCRQO14949 82 aa7.19□□□□□ -1.26
VAPA-201ENST00000340541 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
VAPA-201ENST00000340541 S4R3F8 94 aa7.17□□□□□ -1.26
VAPA-201ENST00000340541 H0Y9P7 68 aa7.15□□□□□ -1.26
VAPA-201ENST00000340541 LCA10Q71F78 164 aa7.15□□□□□ -1.26
VAPA-201ENST00000340541 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
VAPA-201ENST00000340541 ATOX1O00244 68 aa7.13□□□□□ -1.27
VAPA-201ENST00000340541 OCR1Q9BZK8 76 aa7.11□□□□□ -1.27
VAPA-201ENST00000340541 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
VAPA-201ENST00000340541 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
VAPA-201ENST00000340541 KRTAP6-3Q3LI67 103 aa7.07□□□□□ -1.28
VAPA-201ENST00000340541 LINC00208Q96KT6 92 aa7.05□□□□□ -1.28
VAPA-201ENST00000340541 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
VAPA-201ENST00000340541 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
VAPA-201ENST00000340541 IMUPQ9GZP8 106 aa7.03□□□□□ -1.28
VAPA-201ENST00000340541 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
VAPA-201ENST00000340541 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
VAPA-201ENST00000340541 MP68P56378 58 aa7□□□□□ -1.29
VAPA-201ENST00000340541 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
VAPA-201ENST00000340541 A8MUN3 132 aa6.95□□□□□ -1.3
VAPA-201ENST00000340541 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
VAPA-201ENST00000340541 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
VAPA-201ENST00000340541 H3BPC8 53 aa6.93□□□□□ -1.3
VAPA-201ENST00000340541 SCGB1A1P11684 91 aa6.93□□□□□ -1.3
VAPA-201ENST00000340541 NDUFC1O43677 76 aa6.9□□□□□ -1.3
VAPA-201ENST00000340541 MT1BP07438 61 aa6.89□□□□□ -1.31
VAPA-201ENST00000340541 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
VAPA-201ENST00000340541 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
VAPA-201ENST00000340541 H3BS24 57 aa6.87□□□□□ -1.31
VAPA-201ENST00000340541 H0YAA0 97 aa6.86□□□□□ -1.31
VAPA-201ENST00000340541 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
VAPA-201ENST00000340541 A6NN06 94 aa6.82□□□□□ -1.32
VAPA-201ENST00000340541 Q5VV11 94 aa6.82□□□□□ -1.32
VAPA-201ENST00000340541 CRIPTQ9P021 101 aa6.82□□□□□ -1.32
VAPA-201ENST00000340541 TRAV7A0A075B6U4 112 aa6.8□□□□□ -1.32
VAPA-201ENST00000340541 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
VAPA-201ENST00000340541 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
VAPA-201ENST00000340541 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
VAPA-201ENST00000340541 KRTAP4-2Q9BYR5 136 aa6.74□□□□□ -1.33
VAPA-201ENST00000340541 NEBP20929 6669 aa6.73□□□□□ -1.33
VAPA-201ENST00000340541 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
VAPA-201ENST00000340541 SERP2Q8N6R1 65 aa6.68□□□□□ -1.34
VAPA-201ENST00000340541 ANAPC13Q9BS18 74 aa6.68□□□□□ -1.34
VAPA-201ENST00000340541 P0C880 135 aa6.66□□□□□ -1.34
VAPA-201ENST00000340541 KRTAP5-9P26371 169 aa6.65□□□□□ -1.34
VAPA-201ENST00000340541 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
VAPA-201ENST00000340541 SNURFQ9Y675 71 aa6.65□□□□□ -1.34
VAPA-201ENST00000340541 ACYP2P14621 99 aa6.64□□□□□ -1.35
VAPA-201ENST00000340541 COX7CP15954 63 aa6.63□□□□□ -1.35
VAPA-201ENST00000340541 KRTAP20-1Q3LI63 56 aa6.62□□□□□ -1.35
VAPA-201ENST00000340541 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
VAPA-201ENST00000340541 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
VAPA-201ENST00000340541 PCP4P48539 62 aa6.57□□□□□ -1.36
VAPA-201ENST00000340541 R4GN34 69 aa6.56□□□□□ -1.36
VAPA-201ENST00000340541 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
VAPA-201ENST00000340541 SPANXA2-OT1Q8N9U9 137 aa6.55□□□□□ -1.36
VAPA-201ENST00000340541 M0QZ58 72 aa6.53□□□□□ -1.36
VAPA-201ENST00000340541 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
VAPA-201ENST00000340541 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
VAPA-201ENST00000340541 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
VAPA-201ENST00000340541 KMT2DO14686 5537 aa6.48□□□□□ -1.37
VAPA-201ENST00000340541 MT1XP80297 61 aa6.48□□□□□ -1.37
VAPA-201ENST00000340541 PLAC4Q8WY50 150 aa6.46□□□□□ -1.38
VAPA-201ENST00000340541 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
VAPA-201ENST00000340541 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
VAPA-201ENST00000340541 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
VAPA-201ENST00000340541 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
VAPA-201ENST00000340541 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
VAPA-201ENST00000340541 H7BZZ5 65 aa6.38□□□□□ -1.39
VAPA-201ENST00000340541 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
VAPA-201ENST00000340541 COA5Q86WW8 74 aa6.36□□□□□ -1.39
VAPA-201ENST00000340541 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
VAPA-201ENST00000340541 TMEM258P61165 79 aa6.33□□□□□ -1.4
VAPA-201ENST00000340541 SPRR2EP22531 72 aa6.31□□□□□ -1.4
VAPA-201ENST00000340541 SPRR2BP35325 72 aa6.31□□□□□ -1.4
VAPA-201ENST00000340541 SPRR2AP35326 72 aa6.31□□□□□ -1.4
VAPA-201ENST00000340541 ATP5EP56381 51 aaPredicted RBP6.31□□□□□ -1.4
VAPA-201ENST00000340541 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
VAPA-201ENST00000340541 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
VAPA-201ENST00000340541 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
VAPA-201ENST00000340541 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.42
VAPA-201ENST00000340541 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.42
VAPA-201ENST00000340541 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.42
VAPA-201ENST00000340541 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
VAPA-201ENST00000340541 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
VAPA-201ENST00000340541 SEC61GP60059 68 aa6.14□□□□□ -1.43
VAPA-201ENST00000340541 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
VAPA-201ENST00000340541 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
VAPA-201ENST00000340541 SPRR2DP22532 72 aa6.1□□□□□ -1.43
VAPA-201ENST00000340541 A0A1B0GU33 70 aa6.08□□□□□ -1.44
VAPA-201ENST00000340541 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
VAPA-201ENST00000340541 A0A0D9SG42 100 aa6.05□□□□□ -1.44
VAPA-201ENST00000340541 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
VAPA-201ENST00000340541 A0A1B0GU69 56 aa6□□□□□ -1.45
VAPA-201ENST00000340541 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
VAPA-201ENST00000340541 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
VAPA-201ENST00000340541 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
VAPA-201ENST00000340541 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
VAPA-201ENST00000340541 V9GYY9 64 aa5.92□□□□□ -1.46
VAPA-201ENST00000340541 A8MU10 97 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms