RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 RNF213Q63HN8 5207 aa10.86□□□□□ -0.67
SOX18-201ENST00000340356 PSPHP1O15172 72 aa10.85□□□□□ -0.67
SOX18-201ENST00000340356 LINC01558Q9Y6Z2 57 aa10.83□□□□□ -0.68
SOX18-201ENST00000340356 PRR15LQ9BU68 103 aa10.81□□□□□ -0.68
SOX18-201ENST00000340356 KRTAP19-2Q3LHN2 52 aa10.78□□□□□ -0.68
SOX18-201ENST00000340356 H1FX-AS1Q4G0G2 97 aa10.76□□□□□ -0.69
SOX18-201ENST00000340356 SPTSSBQ8NFR3 76 aa10.74□□□□□ -0.69
SOX18-201ENST00000340356 Q5VV11 94 aa10.74□□□□□ -0.69
SOX18-201ENST00000340356 LCA10Q71F78 164 aa10.68□□□□□ -0.7
SOX18-201ENST00000340356 S4R3F8 94 aa10.67□□□□□ -0.7
SOX18-201ENST00000340356 A0A1B0GU69 56 aa10.65□□□□□ -0.7
SOX18-201ENST00000340356 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
SOX18-201ENST00000340356 BRK1Q8WUW1 75 aa10.63□□□□□ -0.71
SOX18-201ENST00000340356 LCE2CQ5TA81 110 aa10.59□□□□□ -0.71
SOX18-201ENST00000340356 A6NED7 52 aa10.53□□□□□ -0.72
SOX18-201ENST00000340356 SEC61GP60059 68 aa10.53□□□□□ -0.72
SOX18-201ENST00000340356 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
SOX18-201ENST00000340356 FAT4Q6V0I7 4981 aa10.52□□□□□ -0.73
SOX18-201ENST00000340356 FLGP20930 4061 aaPredicted RBP10.52□□□□□ -0.73
SOX18-201ENST00000340356 CSAG1Q6PB30 78 aa10.41□□□□□ -0.74
SOX18-201ENST00000340356 CDC42SE1Q9NRR8 79 aa10.38□□□□□ -0.75
SOX18-201ENST00000340356 MT1HP80294 61 aa10.37□□□□□ -0.75
SOX18-201ENST00000340356 A8MU10 97 aa10.35□□□□□ -0.75
SOX18-201ENST00000340356 UQCR11O14957 56 aa10.33□□□□□ -0.76
SOX18-201ENST00000340356 KRTAP3-2Q9BYR7 98 aa10.28□□□□□ -0.76
SOX18-201ENST00000340356 A0A1B0GU33 70 aa10.27□□□□□ -0.76
SOX18-201ENST00000340356 KRTAP10-6P60371 365 aaPredicted RBP10.27□□□□□ -0.76
SOX18-201ENST00000340356 M0R2T5 61 aa10.24□□□□□ -0.77
SOX18-201ENST00000340356 MIR22HGQ0VDD5 57 aa10.24□□□□□ -0.77
SOX18-201ENST00000340356 ADM2Q7Z4H4 148 aa10.23□□□□□ -0.77
SOX18-201ENST00000340356 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
SOX18-201ENST00000340356 P0C880 135 aa10.21□□□□□ -0.78
SOX18-201ENST00000340356 H0YAA0 97 aa10.15□□□□□ -0.78
SOX18-201ENST00000340356 PMAIP1Q13794 54 aa10.05□□□□□ -0.8
SOX18-201ENST00000340356 KRTAP13-4Q3LI77 160 aa10.05□□□□□ -0.8
SOX18-201ENST00000340356 LCE2AQ5TA79 106 aaPredicted RBP10.04□□□□□ -0.8
SOX18-201ENST00000340356 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
SOX18-201ENST00000340356 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
SOX18-201ENST00000340356 KRTAP9-8Q9BYQ0 159 aa9.97□□□□□ -0.81
SOX18-201ENST00000340356 A6NN06 94 aa9.93□□□□□ -0.82
SOX18-201ENST00000340356 MT2AP02795 61 aa9.93□□□□□ -0.82
SOX18-201ENST00000340356 A0A0D9SG42 100 aa9.9□□□□□ -0.82
SOX18-201ENST00000340356 MT1FP04733 61 aa9.89□□□□□ -0.83
SOX18-201ENST00000340356 M0QZ58 72 aa9.89□□□□□ -0.83
SOX18-201ENST00000340356 R4GN34 69 aa9.85□□□□□ -0.83
SOX18-201ENST00000340356 KRTAP10-10P60014 251 aa9.83□□□□□ -0.84
SOX18-201ENST00000340356 K7ERS5 55 aa9.75□□□□□ -0.85
SOX18-201ENST00000340356 LINC01554Q52M75 96 aa9.72□□□□□ -0.85
SOX18-201ENST00000340356 KTN1-AS1Q86SY8 53 aa9.72□□□□□ -0.85
SOX18-201ENST00000340356 CRIPTQ9P021 101 aa9.72□□□□□ -0.85
SOX18-201ENST00000340356 KRTAP12-2P59991 146 aa9.66□□□□□ -0.86
SOX18-201ENST00000340356 KRTAP19-1Q8IUB9 90 aa9.66□□□□□ -0.86
SOX18-201ENST00000340356 KRTAP12-1P59990 96 aa9.65□□□□□ -0.86
SOX18-201ENST00000340356 SPINT4Q6UDR6 99 aa9.64□□□□□ -0.87
SOX18-201ENST00000340356 SPRR2GQ9BYE4 73 aa9.62□□□□□ -0.87
SOX18-201ENST00000340356 KRTAP9-3Q9BYQ3 159 aa9.61□□□□□ -0.87
SOX18-201ENST00000340356 LCE2BO14633 110 aa9.4□□□□□ -0.91
SOX18-201ENST00000340356 KRTAP19-8Q3LI54 63 aa9.38□□□□□ -0.91
SOX18-201ENST00000340356 ROMO1P60602 79 aa9.36□□□□□ -0.91
SOX18-201ENST00000340356 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
SOX18-201ENST00000340356 MT1BP07438 61 aa9.32□□□□□ -0.92
SOX18-201ENST00000340356 PLAC4Q8WY50 150 aa9.25□□□□□ -0.93
SOX18-201ENST00000340356 LOC100996750A0A140TA64 210 aa9.25□□□□□ -0.93
SOX18-201ENST00000340356 CAMK2N1Q7Z7J9 78 aa9.25□□□□□ -0.93
SOX18-201ENST00000340356 KRTAP4-6Q9BYQ5 205 aa9.25□□□□□ -0.93
SOX18-201ENST00000340356 USH2AO75445 5202 aa9.22□□□□□ -0.93
SOX18-201ENST00000340356 C10orf95Q9H7T3 257 aa9.13□□□□□ -0.95
SOX18-201ENST00000340356 KRTAP25-1Q3LHN0 102 aa9.09□□□□□ -0.95
SOX18-201ENST00000340356 MT1XP80297 61 aa9□□□□□ -0.97
SOX18-201ENST00000340356 KRTAP10-5P60370 271 aa8.98□□□□□ -0.97
SOX18-201ENST00000340356 FSIP2Q5CZC0 6907 aa8.94□□□□□ -0.98
SOX18-201ENST00000340356 SSPOA2VEC9 5147 aa8.93□□□□□ -0.98
SOX18-201ENST00000340356 KRTAP9-2Q9BYQ4 174 aa8.89□□□□□ -0.99
SOX18-201ENST00000340356 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
SOX18-201ENST00000340356 TNP1P09430 55 aa8.8□□□□□ -1
SOX18-201ENST00000340356 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
SOX18-201ENST00000340356 KRTAP10-7P60409 375 aaPredicted RBP8.66□□□□□ -1.02
SOX18-201ENST00000340356 PP632Q6XCG6 107 aa8.59□□□□□ -1.03
SOX18-201ENST00000340356 FCGBPQ9Y6R7 5405 aaPredicted RBP8.57□□□□□ -1.04
SOX18-201ENST00000340356 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
SOX18-201ENST00000340356 KRTAP23-1A1A580 65 aa8.5□□□□□ -1.05
SOX18-201ENST00000340356 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
SOX18-201ENST00000340356 KMT2DO14686 5537 aa8.44□□□□□ -1.06
SOX18-201ENST00000340356 LCE3AQ5TA76 89 aa8.44□□□□□ -1.06
SOX18-201ENST00000340356 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
SOX18-201ENST00000340356 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
SOX18-201ENST00000340356 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
SOX18-201ENST00000340356 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
SOX18-201ENST00000340356 MACF1Q9UPN3 7388 aaKnown RBP8.14□□□□□ -1.11
SOX18-201ENST00000340356 KRTAP19-5Q3LI72 72 aa8.11□□□□□ -1.11
SOX18-201ENST00000340356 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
SOX18-201ENST00000340356 KRTAP12-3P60328 96 aa8.07□□□□□ -1.12
SOX18-201ENST00000340356 KRTAP19-7Q3SYF9 63 aa8.03□□□□□ -1.12
SOX18-201ENST00000340356 SYNE2Q8WXH0 6885 aaKnown RBP7.94□□□□□ -1.14
SOX18-201ENST00000340356 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
SOX18-201ENST00000340356 MT1EP04732 61 aa7.88□□□□□ -1.15
SOX18-201ENST00000340356 H3BS24 57 aa7.83□□□□□ -1.16
SOX18-201ENST00000340356 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
SOX18-201ENST00000340356 MUC12Q9UKN1 5478 aa7.8□□□□□ -1.16
SOX18-201ENST00000340356 KRTAP5-9P26371 169 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms