RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 KRTAP6-3Q3LI67 103 aa8.92□□□□□ -0.98
ITGA4-202ENST00000339307 CYP4F30PQ9H0H9 118 aa8.92□□□□□ -0.98
ITGA4-202ENST00000339307 MP68P56378 58 aa8.91□□□□□ -0.98
ITGA4-202ENST00000339307 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
ITGA4-202ENST00000339307 S4R3F8 94 aa8.89□□□□□ -0.99
ITGA4-202ENST00000339307 H3BPC8 53 aa8.88□□□□□ -0.99
ITGA4-202ENST00000339307 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
ITGA4-202ENST00000339307 CSAG1Q6PB30 78 aa8.85□□□□□ -0.99
ITGA4-202ENST00000339307 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
ITGA4-202ENST00000339307 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
ITGA4-202ENST00000339307 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
ITGA4-202ENST00000339307 A6NN06 94 aa8.81□□□□□ -1
ITGA4-202ENST00000339307 LCA10Q71F78 164 aa8.8□□□□□ -1
ITGA4-202ENST00000339307 Q5VV11 94 aa8.8□□□□□ -1
ITGA4-202ENST00000339307 MT1BP07438 61 aa8.73□□□□□ -1.01
ITGA4-202ENST00000339307 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.02
ITGA4-202ENST00000339307 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
ITGA4-202ENST00000339307 A8MUN3 132 aa8.68□□□□□ -1.02
ITGA4-202ENST00000339307 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
ITGA4-202ENST00000339307 KRTAP19-8Q3LI54 63 aa8.67□□□□□ -1.02
ITGA4-202ENST00000339307 NEBP20929 6669 aa8.63□□□□□ -1.03
ITGA4-202ENST00000339307 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
ITGA4-202ENST00000339307 C20orf197Q8N268 126 aa8.54□□□□□ -1.04
ITGA4-202ENST00000339307 MUC12Q9UKN1 5478 aa8.53□□□□□ -1.04
ITGA4-202ENST00000339307 COX7CP15954 63 aa8.52□□□□□ -1.05
ITGA4-202ENST00000339307 DMAC1Q96GE9 116 aa8.52□□□□□ -1.05
ITGA4-202ENST00000339307 CRIPTQ9P021 101 aa8.52□□□□□ -1.05
ITGA4-202ENST00000339307 SNURFQ9Y675 71 aa8.52□□□□□ -1.05
ITGA4-202ENST00000339307 NDUFC1O43677 76 aa8.46□□□□□ -1.05
ITGA4-202ENST00000339307 SPANXA2-OT1Q8N9U9 137 aa8.46□□□□□ -1.06
ITGA4-202ENST00000339307 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
ITGA4-202ENST00000339307 ACYP2P14621 99 aa8.42□□□□□ -1.06
ITGA4-202ENST00000339307 KRTAP20-1Q3LI63 56 aa8.41□□□□□ -1.06
ITGA4-202ENST00000339307 KRTAP5-9P26371 169 aa8.37□□□□□ -1.07
ITGA4-202ENST00000339307 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
ITGA4-202ENST00000339307 H0YAA0 97 aa8.33□□□□□ -1.08
ITGA4-202ENST00000339307 KMT2DO14686 5537 aa8.29□□□□□ -1.08
ITGA4-202ENST00000339307 H7BZZ5 65 aa8.29□□□□□ -1.08
ITGA4-202ENST00000339307 SPTSSBQ8NFR3 76 aa8.28□□□□□ -1.08
ITGA4-202ENST00000339307 MDN1Q9NU22 5596 aa8.25□□□□□ -1.09
ITGA4-202ENST00000339307 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
ITGA4-202ENST00000339307 CHKB-CPT1BH3BT56 60 aa8.23□□□□□ -1.09
ITGA4-202ENST00000339307 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
ITGA4-202ENST00000339307 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.09
ITGA4-202ENST00000339307 CCDC179H3BU77 68 aa8.2□□□□□ -1.1
ITGA4-202ENST00000339307 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
ITGA4-202ENST00000339307 R4GN34 69 aa8.16□□□□□ -1.1
ITGA4-202ENST00000339307 MT1XP80297 61 aa8.15□□□□□ -1.1
ITGA4-202ENST00000339307 SPRR2EP22531 72 aa8.12□□□□□ -1.11
ITGA4-202ENST00000339307 SPRR2BP35325 72 aa8.12□□□□□ -1.11
ITGA4-202ENST00000339307 SPRR2AP35326 72 aa8.12□□□□□ -1.11
ITGA4-202ENST00000339307 KRTAP2-3P0C7H8 128 aa8.12□□□□□ -1.11
ITGA4-202ENST00000339307 COA5Q86WW8 74 aa8.12□□□□□ -1.11
ITGA4-202ENST00000339307 KRTAP2-4Q9BYR9 128 aa8.12□□□□□ -1.11
ITGA4-202ENST00000339307 KRTAP8-1Q8IUC2 63 aa8.1□□□□□ -1.11
ITGA4-202ENST00000339307 M0QZ58 72 aa8.09□□□□□ -1.11
ITGA4-202ENST00000339307 P0C880 135 aa8.09□□□□□ -1.11
ITGA4-202ENST00000339307 ATP5EP56381 51 aaPredicted RBP8.09□□□□□ -1.11
ITGA4-202ENST00000339307 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
ITGA4-202ENST00000339307 TMEM258P61165 79 aa8.01□□□□□ -1.13
ITGA4-202ENST00000339307 KRTAP12-2P59991 146 aa7.96□□□□□ -1.13
ITGA4-202ENST00000339307 LCE1AQ5T7P2 110 aa7.92□□□□□ -1.14
ITGA4-202ENST00000339307 KRTAP4-8A0A0G2JLE6 195 aa7.91□□□□□ -1.14
ITGA4-202ENST00000339307 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
ITGA4-202ENST00000339307 SEC61GP60059 68 aa7.88□□□□□ -1.15
ITGA4-202ENST00000339307 SPRR2DP22532 72 aa7.86□□□□□ -1.15
ITGA4-202ENST00000339307 KRTAP2-2Q9BYT5 123 aa7.85□□□□□ -1.15
ITGA4-202ENST00000339307 KRTAP2-1Q9BYU5 128 aa7.85□□□□□ -1.15
ITGA4-202ENST00000339307 SERP1Q9Y6X1 66 aa7.85□□□□□ -1.15
ITGA4-202ENST00000339307 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
ITGA4-202ENST00000339307 PCP4P48539 62 aa7.76□□□□□ -1.17
ITGA4-202ENST00000339307 A0A1B0GU69 56 aa7.72□□□□□ -1.17
ITGA4-202ENST00000339307 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
ITGA4-202ENST00000339307 A0A1B0GU33 70 aa7.67□□□□□ -1.18
ITGA4-202ENST00000339307 PRR15LQ9BU68 103 aa7.67□□□□□ -1.18
ITGA4-202ENST00000339307 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
ITGA4-202ENST00000339307 LCE3BQ5TA77 95 aa7.65□□□□□ -1.18
ITGA4-202ENST00000339307 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
ITGA4-202ENST00000339307 V9GYY9 64 aa7.54□□□□□ -1.2
ITGA4-202ENST00000339307 RPS28P62857 69 aaKnown RBP7.51□□□□□ -1.21
ITGA4-202ENST00000339307 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
ITGA4-202ENST00000339307 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
ITGA4-202ENST00000339307 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
ITGA4-202ENST00000339307 Q1T7F1 81 aa7.47□□□□□ -1.21
ITGA4-202ENST00000339307 A0A0D9SG42 100 aa7.43□□□□□ -1.22
ITGA4-202ENST00000339307 UQCR11O14957 56 aa7.41□□□□□ -1.22
ITGA4-202ENST00000339307 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
ITGA4-202ENST00000339307 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
ITGA4-202ENST00000339307 A8MU10 97 aa7.3□□□□□ -1.24
ITGA4-202ENST00000339307 PSPHP1O15172 72 aa7.29□□□□□ -1.24
ITGA4-202ENST00000339307 KRTAP19-7Q3SYF9 63 aa7.27□□□□□ -1.25
ITGA4-202ENST00000339307 DSTQ03001 7570 aaKnown RBP7.26□□□□□ -1.25
ITGA4-202ENST00000339307 LCE5AQ5TCM9 118 aa7.26□□□□□ -1.25
ITGA4-202ENST00000339307 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
ITGA4-202ENST00000339307 MT1EP04732 61 aa7.24□□□□□ -1.25
ITGA4-202ENST00000339307 KRTAP19-3Q7Z4W3 81 aa7.23□□□□□ -1.25
ITGA4-202ENST00000339307 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.25
ITGA4-202ENST00000339307 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.25
ITGA4-202ENST00000339307 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
ITGA4-202ENST00000339307 GPR98Q8WXG9 6306 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms