RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 FLG2Q5D862 2391 aaPredicted RBP4.88□□□□□ -1.63
LSAMP-201ENST00000333617 IGLV7-46A0A075B6I9 117 aa4.87□□□□□ -1.63
LSAMP-201ENST00000333617 FP248Q71RG6 208 aaPredicted RBP4.86□□□□□ -1.63
LSAMP-201ENST00000333617 Q5VSD8 79 aa4.85□□□□□ -1.63
LSAMP-201ENST00000333617 RETNLBQ9BQ08 111 aa4.85□□□□□ -1.63
LSAMP-201ENST00000333617 KIAA1109Q2LD37 5005 aa4.84□□□□□ -1.63
LSAMP-201ENST00000333617 C4orf26Q17RF5 130 aa4.83□□□□□ -1.64
LSAMP-201ENST00000333617 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
LSAMP-201ENST00000333617 DMBT1Q9UGM3 2413 aaPredicted RBP4.81□□□□□ -1.64
LSAMP-201ENST00000333617 KRTAP10-8P60410 259 aa4.79□□□□□ -1.64
LSAMP-201ENST00000333617 COA5Q86WW8 74 aa4.79□□□□□ -1.64
LSAMP-201ENST00000333617 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
LSAMP-201ENST00000333617 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
LSAMP-201ENST00000333617 HRES1P13985 223 aa4.78□□□□□ -1.64
LSAMP-201ENST00000333617 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
LSAMP-201ENST00000333617 Q1T7F1 81 aa4.77□□□□□ -1.65
LSAMP-201ENST00000333617 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
LSAMP-201ENST00000333617 A8MUU9 505 aa4.75□□□□□ -1.65
LSAMP-201ENST00000333617 V9GYY9 64 aa4.74□□□□□ -1.65
LSAMP-201ENST00000333617 ACYP2P14621 99 aa4.74□□□□□ -1.65
LSAMP-201ENST00000333617 C7orf65Q6ZTY9 151 aa4.73□□□□□ -1.65
LSAMP-201ENST00000333617 DMAC1Q96GE9 116 aa4.73□□□□□ -1.65
LSAMP-201ENST00000333617 HERC2O95714 4834 aa4.73□□□□□ -1.65
LSAMP-201ENST00000333617 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
LSAMP-201ENST00000333617 PSPHP1O15172 72 aa4.69□□□□□ -1.66
LSAMP-201ENST00000333617 Q75L30 129 aa4.69□□□□□ -1.66
LSAMP-201ENST00000333617 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
LSAMP-201ENST00000333617 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
LSAMP-201ENST00000333617 SEC61GP60059 68 aa4.67□□□□□ -1.66
LSAMP-201ENST00000333617 A8MUN3 132 aa4.66□□□□□ -1.66
LSAMP-201ENST00000333617 PCLOQ9Y6V0 5065 aa4.66□□□□□ -1.66
LSAMP-201ENST00000333617 PRR15LQ9BU68 103 aa4.65□□□□□ -1.67
LSAMP-201ENST00000333617 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
LSAMP-201ENST00000333617 SPINK7P58062 85 aa4.63□□□□□ -1.67
LSAMP-201ENST00000333617 Q5VV11 94 aa4.63□□□□□ -1.67
LSAMP-201ENST00000333617 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
LSAMP-201ENST00000333617 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
LSAMP-201ENST00000333617 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
LSAMP-201ENST00000333617 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
LSAMP-201ENST00000333617 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
LSAMP-201ENST00000333617 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
LSAMP-201ENST00000333617 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
LSAMP-201ENST00000333617 LRP2P98164 4655 aa4.57□□□□□ -1.68
LSAMP-201ENST00000333617 A6NED7 52 aa4.55□□□□□ -1.68
LSAMP-201ENST00000333617 COX6B2Q6YFQ2 88 aa4.54□□□□□ -1.68
LSAMP-201ENST00000333617 A0A1B0GU69 56 aa4.53□□□□□ -1.68
LSAMP-201ENST00000333617 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
LSAMP-201ENST00000333617 SPTSSBQ8NFR3 76 aa4.53□□□□□ -1.68
LSAMP-201ENST00000333617 LPAP08519 4548 aa4.53□□□□□ -1.68
LSAMP-201ENST00000333617 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
LSAMP-201ENST00000333617 LCA10Q71F78 164 aa4.48□□□□□ -1.69
LSAMP-201ENST00000333617 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
LSAMP-201ENST00000333617 A8MU10 97 aa4.47□□□□□ -1.69
LSAMP-201ENST00000333617 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
LSAMP-201ENST00000333617 HERC1Q15751 4861 aa4.42□□□□□ -1.7
LSAMP-201ENST00000333617 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
LSAMP-201ENST00000333617 UQCR11O14957 56 aa4.42□□□□□ -1.7
LSAMP-201ENST00000333617 MUC17Q685J3 4493 aa4.41□□□□□ -1.7
LSAMP-201ENST00000333617 S4R3F8 94 aa4.4□□□□□ -1.71
LSAMP-201ENST00000333617 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
LSAMP-201ENST00000333617 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
LSAMP-201ENST00000333617 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
LSAMP-201ENST00000333617 RBM12B-AS1Q9P1G2 102 aa4.39□□□□□ -1.71
LSAMP-201ENST00000333617 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
LSAMP-201ENST00000333617 MT3P25713 68 aa4.36□□□□□ -1.71
LSAMP-201ENST00000333617 A0A1B0GU33 70 aa4.34□□□□□ -1.71
LSAMP-201ENST00000333617 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
LSAMP-201ENST00000333617 A6NN06 94 aa4.31□□□□□ -1.72
LSAMP-201ENST00000333617 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
LSAMP-201ENST00000333617 H0YAA0 97 aa4.3□□□□□ -1.72
LSAMP-201ENST00000333617 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.73
LSAMP-201ENST00000333617 CSAG1Q6PB30 78 aa4.27□□□□□ -1.73
LSAMP-201ENST00000333617 KRTAP4-1Q9BYQ7 146 aa4.27□□□□□ -1.73
LSAMP-201ENST00000333617 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
LSAMP-201ENST00000333617 P0C880 135 aa4.23□□□□□ -1.73
LSAMP-201ENST00000333617 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
LSAMP-201ENST00000333617 MUC2Q02817 5179 aa4.19□□□□□ -1.74
LSAMP-201ENST00000333617 KRTAP13-4Q3LI77 160 aa4.19□□□□□ -1.74
LSAMP-201ENST00000333617 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
LSAMP-201ENST00000333617 K7ERS5 55 aa4.17□□□□□ -1.74
LSAMP-201ENST00000333617 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
LSAMP-201ENST00000333617 A0A0D9SG42 100 aa4.14□□□□□ -1.75
LSAMP-201ENST00000333617 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
LSAMP-201ENST00000333617 M0QZ58 72 aa4.13□□□□□ -1.75
LSAMP-201ENST00000333617 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
LSAMP-201ENST00000333617 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
LSAMP-201ENST00000333617 R4GN34 69 aa4.06□□□□□ -1.76
LSAMP-201ENST00000333617 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
LSAMP-201ENST00000333617 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
LSAMP-201ENST00000333617 SPINT4Q6UDR6 99 aa4.04□□□□□ -1.76
LSAMP-201ENST00000333617 ROMO1P60602 79 aa4.02□□□□□ -1.77
LSAMP-201ENST00000333617 FAT4Q6V0I7 4981 aa4.01□□□□□ -1.77
LSAMP-201ENST00000333617 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
LSAMP-201ENST00000333617 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
LSAMP-201ENST00000333617 M0R2T5 61 aa3.93□□□□□ -1.78
LSAMP-201ENST00000333617 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
LSAMP-201ENST00000333617 MT1HP80294 61 aa3.93□□□□□ -1.78
LSAMP-201ENST00000333617 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
LSAMP-201ENST00000333617 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
LSAMP-201ENST00000333617 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms