RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 H7BZZ5 65 aa8.98□□□□□ -0.97
TSSC4-201ENST00000333256 SPANXA2-OT1Q8N9U9 137 aa8.97□□□□□ -0.97
TSSC4-201ENST00000333256 NDUFC1O43677 76 aa8.97□□□□□ -0.97
TSSC4-201ENST00000333256 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
TSSC4-201ENST00000333256 ACYP2P14621 99 aa8.91□□□□□ -0.98
TSSC4-201ENST00000333256 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
TSSC4-201ENST00000333256 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
TSSC4-201ENST00000333256 MT2AP02795 61 aa8.84□□□□□ -0.99
TSSC4-201ENST00000333256 CHKB-CPT1BH3BT56 60 aa8.79□□□□□ -1
TSSC4-201ENST00000333256 MT1FP04733 61 aa8.78□□□□□ -1
TSSC4-201ENST00000333256 KRTAP10-10P60014 251 aa8.75□□□□□ -1.01
TSSC4-201ENST00000333256 COA5Q86WW8 74 aa8.75□□□□□ -1.01
TSSC4-201ENST00000333256 TMEM258P61165 79 aa8.69□□□□□ -1.02
TSSC4-201ENST00000333256 SPTSSBQ8NFR3 76 aa8.66□□□□□ -1.02
TSSC4-201ENST00000333256 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.02
TSSC4-201ENST00000333256 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
TSSC4-201ENST00000333256 H0YAA0 97 aa8.61□□□□□ -1.03
TSSC4-201ENST00000333256 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
TSSC4-201ENST00000333256 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
TSSC4-201ENST00000333256 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
TSSC4-201ENST00000333256 P0C880 135 aa8.53□□□□□ -1.04
TSSC4-201ENST00000333256 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
TSSC4-201ENST00000333256 RPS28P62857 69 aaKnown RBP8.49□□□□□ -1.05
TSSC4-201ENST00000333256 LCE2BO14633 110 aa8.46□□□□□ -1.06
TSSC4-201ENST00000333256 KRTAP19-1Q8IUB9 90 aa8.43□□□□□ -1.06
TSSC4-201ENST00000333256 SERP1Q9Y6X1 66 aa8.42□□□□□ -1.06
TSSC4-201ENST00000333256 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
TSSC4-201ENST00000333256 CRIPTQ9P021 101 aa8.4□□□□□ -1.07
TSSC4-201ENST00000333256 USH2AO75445 5202 aa8.38□□□□□ -1.07
TSSC4-201ENST00000333256 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
TSSC4-201ENST00000333256 SEC61GP60059 68 aa8.34□□□□□ -1.07
TSSC4-201ENST00000333256 R4GN34 69 aa8.34□□□□□ -1.07
TSSC4-201ENST00000333256 M0QZ58 72 aa8.32□□□□□ -1.08
TSSC4-201ENST00000333256 A0A1B0GU69 56 aa8.28□□□□□ -1.08
TSSC4-201ENST00000333256 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
TSSC4-201ENST00000333256 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
TSSC4-201ENST00000333256 LINC01554Q52M75 96 aa8.21□□□□□ -1.09
TSSC4-201ENST00000333256 SSPOA2VEC9 5147 aa8.21□□□□□ -1.1
TSSC4-201ENST00000333256 MT1BP07438 61 aa8.2□□□□□ -1.1
TSSC4-201ENST00000333256 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
TSSC4-201ENST00000333256 Q5VV11 94 aa8.2□□□□□ -1.1
TSSC4-201ENST00000333256 A0A1B0GU33 70 aa8.18□□□□□ -1.1
TSSC4-201ENST00000333256 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
TSSC4-201ENST00000333256 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.1
TSSC4-201ENST00000333256 PRR15LQ9BU68 103 aa8.15□□□□□ -1.1
TSSC4-201ENST00000333256 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
TSSC4-201ENST00000333256 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
TSSC4-201ENST00000333256 Q1T7F1 81 aa8.08□□□□□ -1.12
TSSC4-201ENST00000333256 V9GYY9 64 aa8.06□□□□□ -1.12
TSSC4-201ENST00000333256 PSPHP1O15172 72 aa8.05□□□□□ -1.12
TSSC4-201ENST00000333256 A0A0D9SG42 100 aa8.03□□□□□ -1.12
TSSC4-201ENST00000333256 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
TSSC4-201ENST00000333256 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
TSSC4-201ENST00000333256 A8MU10 97 aa7.94□□□□□ -1.14
TSSC4-201ENST00000333256 A6NN06 94 aa7.93□□□□□ -1.14
TSSC4-201ENST00000333256 FCGBPQ9Y6R7 5405 aaPredicted RBP7.93□□□□□ -1.14
TSSC4-201ENST00000333256 UQCR11O14957 56 aa7.92□□□□□ -1.14
TSSC4-201ENST00000333256 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
TSSC4-201ENST00000333256 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
TSSC4-201ENST00000333256 SPINT4Q6UDR6 99 aa7.86□□□□□ -1.15
TSSC4-201ENST00000333256 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
TSSC4-201ENST00000333256 MT1XP80297 61 aa7.83□□□□□ -1.16
TSSC4-201ENST00000333256 KRTAP12-2P59991 146 aa7.81□□□□□ -1.16
TSSC4-201ENST00000333256 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
TSSC4-201ENST00000333256 A6NED7 52 aa7.77□□□□□ -1.17
TSSC4-201ENST00000333256 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
TSSC4-201ENST00000333256 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
TSSC4-201ENST00000333256 BRK1Q8WUW1 75 aa7.7□□□□□ -1.18
TSSC4-201ENST00000333256 MACF1Q9UPN3 7388 aaKnown RBP7.63□□□□□ -1.19
TSSC4-201ENST00000333256 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
TSSC4-201ENST00000333256 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.21
TSSC4-201ENST00000333256 K7ERS5 55 aa7.51□□□□□ -1.21
TSSC4-201ENST00000333256 KRTAP10-7P60409 375 aaPredicted RBP7.51□□□□□ -1.21
TSSC4-201ENST00000333256 SYNE2Q8WXH0 6885 aaKnown RBP7.47□□□□□ -1.21
TSSC4-201ENST00000333256 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
TSSC4-201ENST00000333256 KMT2DO14686 5537 aa7.45□□□□□ -1.22
TSSC4-201ENST00000333256 PMAIP1Q13794 54 aa7.44□□□□□ -1.22
TSSC4-201ENST00000333256 KRTAP10-12P60413 245 aa7.4□□□□□ -1.23
TSSC4-201ENST00000333256 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
TSSC4-201ENST00000333256 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
TSSC4-201ENST00000333256 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
TSSC4-201ENST00000333256 TNP1P09430 55 aa7.28□□□□□ -1.24
TSSC4-201ENST00000333256 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
TSSC4-201ENST00000333256 KRTAP6-3Q3LI67 103 aa7.22□□□□□ -1.25
TSSC4-201ENST00000333256 KTN1-AS1Q86SY8 53 aa7.22□□□□□ -1.25
TSSC4-201ENST00000333256 ROMO1P60602 79 aa7.14□□□□□ -1.27
TSSC4-201ENST00000333256 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
TSSC4-201ENST00000333256 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
TSSC4-201ENST00000333256 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
TSSC4-201ENST00000333256 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
TSSC4-201ENST00000333256 MUC12Q9UKN1 5478 aa7.08□□□□□ -1.28
TSSC4-201ENST00000333256 MDN1Q9NU22 5596 aa6.98□□□□□ -1.29
TSSC4-201ENST00000333256 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
TSSC4-201ENST00000333256 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
TSSC4-201ENST00000333256 MT1EP04732 61 aa6.88□□□□□ -1.31
TSSC4-201ENST00000333256 NEBP20929 6669 aa6.87□□□□□ -1.31
TSSC4-201ENST00000333256 SPRR2EP22531 72 aa6.86□□□□□ -1.31
TSSC4-201ENST00000333256 SPRR2BP35325 72 aa6.86□□□□□ -1.31
TSSC4-201ENST00000333256 SPRR2AP35326 72 aa6.86□□□□□ -1.31
TSSC4-201ENST00000333256 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 297 ms