RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 Q5W150 140 aa5.23□□□□□ -1.57
SYN3-201ENST00000332840 LOC101927531A0A1B0GV80 90 aa5.22□□□□□ -1.57
SYN3-201ENST00000332840 TMEM258P61165 79 aa5.22□□□□□ -1.57
SYN3-201ENST00000332840 PCOTHQ58A44 107 aa5.22□□□□□ -1.57
SYN3-201ENST00000332840 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
SYN3-201ENST00000332840 Q75L30 129 aa5.19□□□□□ -1.58
SYN3-201ENST00000332840 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
SYN3-201ENST00000332840 ATP5EP56381 51 aaPredicted RBP5.17□□□□□ -1.58
SYN3-201ENST00000332840 FAM236DA0A1B0GTK5 79 aa5.16□□□□□ -1.58
SYN3-201ENST00000332840 IGKV2-30P06310 120 aa5.16□□□□□ -1.58
SYN3-201ENST00000332840 FAM236CP0DP71 79 aa5.16□□□□□ -1.58
SYN3-201ENST00000332840 CYP4F30PQ9H0H9 118 aa5.16□□□□□ -1.58
SYN3-201ENST00000332840 ATP11AUNQ6ZP68 121 aa5.15□□□□□ -1.59
SYN3-201ENST00000332840 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
SYN3-201ENST00000332840 IGKV2D-30A0A075B6S6 120 aa5.13□□□□□ -1.59
SYN3-201ENST00000332840 C7orf65Q6ZTY9 151 aa5.12□□□□□ -1.59
SYN3-201ENST00000332840 COX6B2Q6YFQ2 88 aa5.08□□□□□ -1.6
SYN3-201ENST00000332840 HRES1P13985 223 aa5.07□□□□□ -1.6
SYN3-201ENST00000332840 SERP1Q9Y6X1 66 aa5.07□□□□□ -1.6
SYN3-201ENST00000332840 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
SYN3-201ENST00000332840 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
SYN3-201ENST00000332840 SPINK7P58062 85 aa5.05□□□□□ -1.6
SYN3-201ENST00000332840 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
SYN3-201ENST00000332840 MT1HP80294 61 aa5.03□□□□□ -1.6
SYN3-201ENST00000332840 ACYP2P14621 99 aa5.01□□□□□ -1.61
SYN3-201ENST00000332840 M0R2T5 61 aa5□□□□□ -1.61
SYN3-201ENST00000332840 DMAC1Q96GE9 116 aa5□□□□□ -1.61
SYN3-201ENST00000332840 A8MUN3 132 aa4.98□□□□□ -1.61
SYN3-201ENST00000332840 C4orf26Q17RF5 130 aa4.98□□□□□ -1.61
SYN3-201ENST00000332840 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
SYN3-201ENST00000332840 COA5Q86WW8 74 aa4.97□□□□□ -1.61
SYN3-201ENST00000332840 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
SYN3-201ENST00000332840 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
SYN3-201ENST00000332840 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
SYN3-201ENST00000332840 CHKB-CPT1BH3BT56 60 aa4.92□□□□□ -1.62
SYN3-201ENST00000332840 MPLKIPQ8TAP9 179 aa4.87□□□□□ -1.63
SYN3-201ENST00000332840 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
SYN3-201ENST00000332840 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
SYN3-201ENST00000332840 V9GYY9 64 aa4.85□□□□□ -1.63
SYN3-201ENST00000332840 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
SYN3-201ENST00000332840 Q1T7F1 81 aa4.83□□□□□ -1.64
SYN3-201ENST00000332840 H1FX-AS1Q4G0G2 97 aa4.83□□□□□ -1.64
SYN3-201ENST00000332840 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
SYN3-201ENST00000332840 S4R3F8 94 aa4.79□□□□□ -1.64
SYN3-201ENST00000332840 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
SYN3-201ENST00000332840 LCA10Q71F78 164 aa4.75□□□□□ -1.65
SYN3-201ENST00000332840 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
SYN3-201ENST00000332840 USH2AO75445 5202 aa4.74□□□□□ -1.65
SYN3-201ENST00000332840 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
SYN3-201ENST00000332840 PSPHP1O15172 72 aa4.72□□□□□ -1.65
SYN3-201ENST00000332840 A0A1B0GU69 56 aa4.71□□□□□ -1.66
SYN3-201ENST00000332840 MT2AP02795 61 aa4.7□□□□□ -1.66
SYN3-201ENST00000332840 SEC61GP60059 68 aa4.7□□□□□ -1.66
SYN3-201ENST00000332840 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
SYN3-201ENST00000332840 Q5VV11 94 aa4.69□□□□□ -1.66
SYN3-201ENST00000332840 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
SYN3-201ENST00000332840 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
SYN3-201ENST00000332840 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
SYN3-201ENST00000332840 MT1FP04733 61 aa4.65□□□□□ -1.67
SYN3-201ENST00000332840 A6NED7 52 aa4.6□□□□□ -1.67
SYN3-201ENST00000332840 H0YAA0 97 aa4.59□□□□□ -1.67
SYN3-201ENST00000332840 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
SYN3-201ENST00000332840 UQCR11O14957 56 aa4.58□□□□□ -1.68
SYN3-201ENST00000332840 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
SYN3-201ENST00000332840 A0A1B0GU33 70 aa4.57□□□□□ -1.68
SYN3-201ENST00000332840 ADM2Q7Z4H4 148 aa4.56□□□□□ -1.68
SYN3-201ENST00000332840 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
SYN3-201ENST00000332840 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
SYN3-201ENST00000332840 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
SYN3-201ENST00000332840 P0C880 135 aa4.52□□□□□ -1.69
SYN3-201ENST00000332840 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
SYN3-201ENST00000332840 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
SYN3-201ENST00000332840 M0QZ58 72 aa4.46□□□□□ -1.7
SYN3-201ENST00000332840 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
SYN3-201ENST00000332840 A8MU10 97 aa4.44□□□□□ -1.7
SYN3-201ENST00000332840 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
SYN3-201ENST00000332840 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
SYN3-201ENST00000332840 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
SYN3-201ENST00000332840 R4GN34 69 aa4.42□□□□□ -1.7
SYN3-201ENST00000332840 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
SYN3-201ENST00000332840 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
SYN3-201ENST00000332840 A0A0D9SG42 100 aa4.36□□□□□ -1.71
SYN3-201ENST00000332840 K7ERS5 55 aa4.35□□□□□ -1.71
SYN3-201ENST00000332840 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
SYN3-201ENST00000332840 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
SYN3-201ENST00000332840 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
SYN3-201ENST00000332840 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
SYN3-201ENST00000332840 MT1BP07438 61 aa4.28□□□□□ -1.72
SYN3-201ENST00000332840 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
SYN3-201ENST00000332840 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
SYN3-201ENST00000332840 A6NN06 94 aa4.27□□□□□ -1.73
SYN3-201ENST00000332840 NEBP20929 6669 aa4.27□□□□□ -1.73
SYN3-201ENST00000332840 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
SYN3-201ENST00000332840 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
SYN3-201ENST00000332840 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
SYN3-201ENST00000332840 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
SYN3-201ENST00000332840 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
SYN3-201ENST00000332840 ROMO1P60602 79 aa4.14□□□□□ -1.75
SYN3-201ENST00000332840 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
SYN3-201ENST00000332840 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms