RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
VIPAS39-201ENST00000327028 MUC2Q02817 5179 aa5.18□□□□□ -1.58
VIPAS39-201ENST00000327028 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
VIPAS39-201ENST00000327028 A8MUN3 132 aa5.16□□□□□ -1.58
VIPAS39-201ENST00000327028 H3BS24 57 aa5.16□□□□□ -1.58
VIPAS39-201ENST00000327028 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.58
VIPAS39-201ENST00000327028 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.59
VIPAS39-201ENST00000327028 DMAC1Q96GE9 116 aa5.15□□□□□ -1.59
VIPAS39-201ENST00000327028 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
VIPAS39-201ENST00000327028 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
VIPAS39-201ENST00000327028 Q5VV11 94 aa5.1□□□□□ -1.59
VIPAS39-201ENST00000327028 ACYP2P14621 99 aa5.09□□□□□ -1.6
VIPAS39-201ENST00000327028 LCE2CQ5TA81 110 aa5.09□□□□□ -1.6
VIPAS39-201ENST00000327028 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
VIPAS39-201ENST00000327028 A6NN06 94 aa5.06□□□□□ -1.6
VIPAS39-201ENST00000327028 LCA10Q71F78 164 aa5.05□□□□□ -1.6
VIPAS39-201ENST00000327028 S4R3F8 94 aa5.04□□□□□ -1.6
VIPAS39-201ENST00000327028 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
VIPAS39-201ENST00000327028 A6NED7 52 aa5.03□□□□□ -1.6
VIPAS39-201ENST00000327028 COA5Q86WW8 74 aa5.03□□□□□ -1.6
VIPAS39-201ENST00000327028 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
VIPAS39-201ENST00000327028 MT1HP80294 61 aa4.99□□□□□ -1.61
VIPAS39-201ENST00000327028 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
VIPAS39-201ENST00000327028 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
VIPAS39-201ENST00000327028 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
VIPAS39-201ENST00000327028 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
VIPAS39-201ENST00000327028 M0R2T5 61 aa4.92□□□□□ -1.62
VIPAS39-201ENST00000327028 LINC01554Q52M75 96 aa4.92□□□□□ -1.62
VIPAS39-201ENST00000327028 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.62
VIPAS39-201ENST00000327028 ADM2Q7Z4H4 148 aa4.89□□□□□ -1.63
VIPAS39-201ENST00000327028 H0YAA0 97 aa4.84□□□□□ -1.63
VIPAS39-201ENST00000327028 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
VIPAS39-201ENST00000327028 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
VIPAS39-201ENST00000327028 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
VIPAS39-201ENST00000327028 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
VIPAS39-201ENST00000327028 KRTAP3-2Q9BYR7 98 aa4.77□□□□□ -1.65
VIPAS39-201ENST00000327028 MT2AP02795 61 aa4.77□□□□□ -1.65
VIPAS39-201ENST00000327028 A0A1B0GU69 56 aa4.75□□□□□ -1.65
VIPAS39-201ENST00000327028 P0C880 135 aa4.74□□□□□ -1.65
VIPAS39-201ENST00000327028 MT1FP04733 61 aa4.73□□□□□ -1.65
VIPAS39-201ENST00000327028 KRTAP10-10P60014 251 aa4.71□□□□□ -1.66
VIPAS39-201ENST00000327028 CRIPTQ9P021 101 aa4.68□□□□□ -1.66
VIPAS39-201ENST00000327028 A0A1B0GU33 70 aa4.65□□□□□ -1.66
VIPAS39-201ENST00000327028 R4GN34 69 aa4.63□□□□□ -1.67
VIPAS39-201ENST00000327028 M0QZ58 72 aa4.62□□□□□ -1.67
VIPAS39-201ENST00000327028 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
VIPAS39-201ENST00000327028 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
VIPAS39-201ENST00000327028 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
VIPAS39-201ENST00000327028 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
VIPAS39-201ENST00000327028 ROMO1P60602 79 aa4.59□□□□□ -1.67
VIPAS39-201ENST00000327028 SPATA8Q6RVD6 105 aa4.59□□□□□ -1.68
VIPAS39-201ENST00000327028 UQCR11O14957 56 aa4.58□□□□□ -1.68
VIPAS39-201ENST00000327028 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
VIPAS39-201ENST00000327028 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
VIPAS39-201ENST00000327028 LCE2DQ5TA82 110 aaPredicted RBP4.52□□□□□ -1.69
VIPAS39-201ENST00000327028 KRTAP19-8Q3LI54 63 aa4.51□□□□□ -1.69
VIPAS39-201ENST00000327028 LCE2BO14633 110 aa4.51□□□□□ -1.69
VIPAS39-201ENST00000327028 A0A0D9SG42 100 aa4.49□□□□□ -1.69
VIPAS39-201ENST00000327028 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
VIPAS39-201ENST00000327028 MT1BP07438 61 aa4.45□□□□□ -1.7
VIPAS39-201ENST00000327028 USH2AO75445 5202 aa4.43□□□□□ -1.7
VIPAS39-201ENST00000327028 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
VIPAS39-201ENST00000327028 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
VIPAS39-201ENST00000327028 KRTAP12-2P59991 146 aa4.4□□□□□ -1.7
VIPAS39-201ENST00000327028 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
VIPAS39-201ENST00000327028 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
VIPAS39-201ENST00000327028 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
VIPAS39-201ENST00000327028 K7ERS5 55 aa4.35□□□□□ -1.71
VIPAS39-201ENST00000327028 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
VIPAS39-201ENST00000327028 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
VIPAS39-201ENST00000327028 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
VIPAS39-201ENST00000327028 MT1XP80297 61 aa4.27□□□□□ -1.73
VIPAS39-201ENST00000327028 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
VIPAS39-201ENST00000327028 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
VIPAS39-201ENST00000327028 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
VIPAS39-201ENST00000327028 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
VIPAS39-201ENST00000327028 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
VIPAS39-201ENST00000327028 C10orf95Q9H7T3 257 aa4.19□□□□□ -1.74
VIPAS39-201ENST00000327028 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
VIPAS39-201ENST00000327028 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
VIPAS39-201ENST00000327028 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
VIPAS39-201ENST00000327028 TNP1P09430 55 aa4.09□□□□□ -1.75
VIPAS39-201ENST00000327028 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
VIPAS39-201ENST00000327028 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
VIPAS39-201ENST00000327028 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
VIPAS39-201ENST00000327028 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
VIPAS39-201ENST00000327028 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
VIPAS39-201ENST00000327028 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
VIPAS39-201ENST00000327028 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
VIPAS39-201ENST00000327028 KMT2DO14686 5537 aa3.92□□□□□ -1.78
VIPAS39-201ENST00000327028 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
VIPAS39-201ENST00000327028 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
VIPAS39-201ENST00000327028 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
VIPAS39-201ENST00000327028 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
VIPAS39-201ENST00000327028 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
VIPAS39-201ENST00000327028 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
VIPAS39-201ENST00000327028 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
VIPAS39-201ENST00000327028 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
VIPAS39-201ENST00000327028 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
VIPAS39-201ENST00000327028 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms