RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
PRPF3-201ENST00000324862 COA5Q86WW8 74 aa7.43□□□□□ -1.22
PRPF3-201ENST00000324862 ATP5EP56381 51 aaPredicted RBP7.38□□□□□ -1.23
PRPF3-201ENST00000324862 M0R2T5 61 aa7.38□□□□□ -1.23
PRPF3-201ENST00000324862 CHKB-CPT1BH3BT56 60 aa7.37□□□□□ -1.23
PRPF3-201ENST00000324862 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
PRPF3-201ENST00000324862 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
PRPF3-201ENST00000324862 SERP1Q9Y6X1 66 aa7.27□□□□□ -1.25
PRPF3-201ENST00000324862 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
PRPF3-201ENST00000324862 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
PRPF3-201ENST00000324862 SPTSSBQ8NFR3 76 aa7.17□□□□□ -1.26
PRPF3-201ENST00000324862 KRTAP9-8Q9BYQ0 159 aa7.17□□□□□ -1.26
PRPF3-201ENST00000324862 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
PRPF3-201ENST00000324862 MT2AP02795 61 aa7.12□□□□□ -1.27
PRPF3-201ENST00000324862 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
PRPF3-201ENST00000324862 RPS28P62857 69 aaKnown RBP7.11□□□□□ -1.27
PRPF3-201ENST00000324862 MT1FP04733 61 aa7.1□□□□□ -1.27
PRPF3-201ENST00000324862 P0C880 135 aa7.1□□□□□ -1.27
PRPF3-201ENST00000324862 H0YAA0 97 aa7.05□□□□□ -1.28
PRPF3-201ENST00000324862 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
PRPF3-201ENST00000324862 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
PRPF3-201ENST00000324862 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
PRPF3-201ENST00000324862 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
PRPF3-201ENST00000324862 A0A1B0GU69 56 aa7□□□□□ -1.29
PRPF3-201ENST00000324862 PSPHP1O15172 72 aa6.97□□□□□ -1.29
PRPF3-201ENST00000324862 SEC61GP60059 68 aa6.97□□□□□ -1.29
PRPF3-201ENST00000324862 Q1T7F1 81 aa6.97□□□□□ -1.29
PRPF3-201ENST00000324862 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
PRPF3-201ENST00000324862 KRTAP9-3Q9BYQ3 159 aa6.91□□□□□ -1.3
PRPF3-201ENST00000324862 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
PRPF3-201ENST00000324862 V9GYY9 64 aa6.88□□□□□ -1.31
PRPF3-201ENST00000324862 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
PRPF3-201ENST00000324862 A0A1B0GU33 70 aa6.87□□□□□ -1.31
PRPF3-201ENST00000324862 M0QZ58 72 aa6.87□□□□□ -1.31
PRPF3-201ENST00000324862 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
PRPF3-201ENST00000324862 R4GN34 69 aa6.87□□□□□ -1.31
PRPF3-201ENST00000324862 Q5VV11 94 aa6.86□□□□□ -1.31
PRPF3-201ENST00000324862 FSIP2Q5CZC0 6907 aa6.85□□□□□ -1.31
PRPF3-201ENST00000324862 USH2AO75445 5202 aa6.84□□□□□ -1.31
PRPF3-201ENST00000324862 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
PRPF3-201ENST00000324862 LCE2BO14633 110 aa6.8□□□□□ -1.32
PRPF3-201ENST00000324862 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
PRPF3-201ENST00000324862 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
PRPF3-201ENST00000324862 A0A0D9SG42 100 aa6.75□□□□□ -1.33
PRPF3-201ENST00000324862 A8MU10 97 aa6.75□□□□□ -1.33
PRPF3-201ENST00000324862 UQCR11O14957 56 aa6.72□□□□□ -1.33
PRPF3-201ENST00000324862 A6NED7 52 aa6.69□□□□□ -1.34
PRPF3-201ENST00000324862 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
PRPF3-201ENST00000324862 MT1BP07438 61 aa6.66□□□□□ -1.34
PRPF3-201ENST00000324862 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
PRPF3-201ENST00000324862 KRTAP19-8Q3LI54 63 aa6.65□□□□□ -1.34
PRPF3-201ENST00000324862 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
PRPF3-201ENST00000324862 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
PRPF3-201ENST00000324862 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
PRPF3-201ENST00000324862 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
PRPF3-201ENST00000324862 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
PRPF3-201ENST00000324862 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
PRPF3-201ENST00000324862 A6NN06 94 aa6.5□□□□□ -1.37
PRPF3-201ENST00000324862 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
PRPF3-201ENST00000324862 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
PRPF3-201ENST00000324862 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.38
PRPF3-201ENST00000324862 MT1XP80297 61 aa6.39□□□□□ -1.39
PRPF3-201ENST00000324862 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
PRPF3-201ENST00000324862 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
PRPF3-201ENST00000324862 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
PRPF3-201ENST00000324862 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.4
PRPF3-201ENST00000324862 K7ERS5 55 aa6.3□□□□□ -1.4
PRPF3-201ENST00000324862 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
PRPF3-201ENST00000324862 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
PRPF3-201ENST00000324862 KMT2DO14686 5537 aa6.21□□□□□ -1.41
PRPF3-201ENST00000324862 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
PRPF3-201ENST00000324862 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
PRPF3-201ENST00000324862 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
PRPF3-201ENST00000324862 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
PRPF3-201ENST00000324862 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
PRPF3-201ENST00000324862 ROMO1P60602 79 aa6.07□□□□□ -1.44
PRPF3-201ENST00000324862 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
PRPF3-201ENST00000324862 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
PRPF3-201ENST00000324862 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
PRPF3-201ENST00000324862 TNP1P09430 55 aa6.01□□□□□ -1.45
PRPF3-201ENST00000324862 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
PRPF3-201ENST00000324862 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
PRPF3-201ENST00000324862 LCE3AQ5TA76 89 aa5.9□□□□□ -1.47
PRPF3-201ENST00000324862 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
PRPF3-201ENST00000324862 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
PRPF3-201ENST00000324862 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
PRPF3-201ENST00000324862 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
PRPF3-201ENST00000324862 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
PRPF3-201ENST00000324862 KTN1-AS1Q86SY8 53 aa5.72□□□□□ -1.49
PRPF3-201ENST00000324862 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
PRPF3-201ENST00000324862 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
PRPF3-201ENST00000324862 MDN1Q9NU22 5596 aa5.68□□□□□ -1.5
PRPF3-201ENST00000324862 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
PRPF3-201ENST00000324862 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
PRPF3-201ENST00000324862 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
PRPF3-201ENST00000324862 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
PRPF3-201ENST00000324862 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
PRPF3-201ENST00000324862 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
PRPF3-201ENST00000324862 MT1EP04732 61 aa5.6□□□□□ -1.51
PRPF3-201ENST00000324862 MT1LQ93083 61 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms