RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 LINC00208Q96KT6 92 aa7.28□□□□□ -1.24
TSFM-201ENST00000323833 LCA10Q71F78 164 aa7.27□□□□□ -1.25
TSFM-201ENST00000323833 MT-ATP8P03928 68 aa7.25□□□□□ -1.25
TSFM-201ENST00000323833 MP68P56378 58 aa7.25□□□□□ -1.25
TSFM-201ENST00000323833 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
TSFM-201ENST00000323833 KLKP1Q107X0 134 aa7.23□□□□□ -1.25
TSFM-201ENST00000323833 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
TSFM-201ENST00000323833 IMUPQ9GZP8 106 aa7.21□□□□□ -1.26
TSFM-201ENST00000323833 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
TSFM-201ENST00000323833 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
TSFM-201ENST00000323833 SSPOA2VEC9 5147 aa7.17□□□□□ -1.26
TSFM-201ENST00000323833 LCE4AQ5TA78 99 aa7.17□□□□□ -1.26
TSFM-201ENST00000323833 H3BPC8 53 aa7.15□□□□□ -1.26
TSFM-201ENST00000323833 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
TSFM-201ENST00000323833 FAM236AA0A1B0GUQ0 79 aa7.13□□□□□ -1.27
TSFM-201ENST00000323833 FAM236BA0A1B0GV22 79 aa7.13□□□□□ -1.27
TSFM-201ENST00000323833 A8MUN3 132 aa7.11□□□□□ -1.27
TSFM-201ENST00000323833 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
TSFM-201ENST00000323833 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
TSFM-201ENST00000323833 NDUFC1O43677 76 aa7.06□□□□□ -1.28
TSFM-201ENST00000323833 SMIM20Q8N5G0 67 aa7.06□□□□□ -1.28
TSFM-201ENST00000323833 DMAC1Q96GE9 116 aa7□□□□□ -1.29
TSFM-201ENST00000323833 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
TSFM-201ENST00000323833 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.3
TSFM-201ENST00000323833 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
TSFM-201ENST00000323833 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
TSFM-201ENST00000323833 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
TSFM-201ENST00000323833 H0YAA0 97 aa6.93□□□□□ -1.3
TSFM-201ENST00000323833 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
TSFM-201ENST00000323833 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
TSFM-201ENST00000323833 SERP2Q8N6R1 65 aa6.9□□□□□ -1.3
TSFM-201ENST00000323833 MT1BP07438 61 aa6.88□□□□□ -1.31
TSFM-201ENST00000323833 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
TSFM-201ENST00000323833 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
TSFM-201ENST00000323833 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
TSFM-201ENST00000323833 ACYP2P14621 99 aa6.86□□□□□ -1.31
TSFM-201ENST00000323833 Q5VV11 94 aa6.86□□□□□ -1.31
TSFM-201ENST00000323833 P0C880 135 aa6.78□□□□□ -1.32
TSFM-201ENST00000323833 SPANXA2-OT1Q8N9U9 137 aa6.77□□□□□ -1.33
TSFM-201ENST00000323833 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
TSFM-201ENST00000323833 COX7CP15954 63 aa6.74□□□□□ -1.33
TSFM-201ENST00000323833 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
TSFM-201ENST00000323833 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
TSFM-201ENST00000323833 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
TSFM-201ENST00000323833 A6NN06 94 aa6.71□□□□□ -1.34
TSFM-201ENST00000323833 R4GN34 69 aa6.7□□□□□ -1.34
TSFM-201ENST00000323833 KRTAP4-9Q9BYQ8 210 aa6.68□□□□□ -1.34
TSFM-201ENST00000323833 M0QZ58 72 aa6.67□□□□□ -1.34
TSFM-201ENST00000323833 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
TSFM-201ENST00000323833 CYSTM1Q9H1C7 97 aa6.65□□□□□ -1.34
TSFM-201ENST00000323833 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
TSFM-201ENST00000323833 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
TSFM-201ENST00000323833 H7BZZ5 65 aa6.6□□□□□ -1.35
TSFM-201ENST00000323833 COA5Q86WW8 74 aa6.6□□□□□ -1.35
TSFM-201ENST00000323833 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
TSFM-201ENST00000323833 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
TSFM-201ENST00000323833 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
TSFM-201ENST00000323833 CCDC179H3BU77 68 aa6.5□□□□□ -1.37
TSFM-201ENST00000323833 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
TSFM-201ENST00000323833 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
TSFM-201ENST00000323833 MT1XP80297 61 aa6.49□□□□□ -1.37
TSFM-201ENST00000323833 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
TSFM-201ENST00000323833 PRO2289Q9P1D8 64 aa6.46□□□□□ -1.38
TSFM-201ENST00000323833 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
TSFM-201ENST00000323833 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
TSFM-201ENST00000323833 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
TSFM-201ENST00000323833 SEC61GP60059 68 aa6.39□□□□□ -1.39
TSFM-201ENST00000323833 SERP1Q9Y6X1 66 aa6.38□□□□□ -1.39
TSFM-201ENST00000323833 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
TSFM-201ENST00000323833 KMT2DO14686 5537 aa6.29□□□□□ -1.4
TSFM-201ENST00000323833 A0A1B0GU33 70 aa6.28□□□□□ -1.4
TSFM-201ENST00000323833 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
TSFM-201ENST00000323833 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
TSFM-201ENST00000323833 A0A0D9SG42 100 aa6.25□□□□□ -1.41
TSFM-201ENST00000323833 A0A1B0GU69 56 aa6.25□□□□□ -1.41
TSFM-201ENST00000323833 KRTAP5-9P26371 169 aa6.25□□□□□ -1.41
TSFM-201ENST00000323833 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
TSFM-201ENST00000323833 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
TSFM-201ENST00000323833 TMEM258P61165 79 aa6.22□□□□□ -1.41
TSFM-201ENST00000323833 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
TSFM-201ENST00000323833 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
TSFM-201ENST00000323833 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
TSFM-201ENST00000323833 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
TSFM-201ENST00000323833 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
TSFM-201ENST00000323833 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
TSFM-201ENST00000323833 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
TSFM-201ENST00000323833 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
TSFM-201ENST00000323833 A8MU10 97 aa6.09□□□□□ -1.43
TSFM-201ENST00000323833 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
TSFM-201ENST00000323833 NEBP20929 6669 aa6.07□□□□□ -1.44
TSFM-201ENST00000323833 MDN1Q9NU22 5596 aa6.05□□□□□ -1.44
TSFM-201ENST00000323833 SPRR2EP22531 72 aa6□□□□□ -1.45
TSFM-201ENST00000323833 SPRR2BP35325 72 aa6□□□□□ -1.45
TSFM-201ENST00000323833 SPRR2AP35326 72 aa6□□□□□ -1.45
TSFM-201ENST00000323833 PCP4P48539 62 aa5.99□□□□□ -1.45
TSFM-201ENST00000323833 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
TSFM-201ENST00000323833 UQCR11O14957 56 aa5.91□□□□□ -1.46
TSFM-201ENST00000323833 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
TSFM-201ENST00000323833 C10orf95Q9H7T3 257 aa5.84□□□□□ -1.47
TSFM-201ENST00000323833 PSPHP1O15172 72 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms