RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
SF3B2-201ENST00000322535 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
SF3B2-201ENST00000322535 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.49
SF3B2-201ENST00000322535 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
SF3B2-201ENST00000322535 HSPG2P98160 4391 aa5.65□□□□□ -1.5
SF3B2-201ENST00000322535 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
SF3B2-201ENST00000322535 H1FX-AS1Q4G0G2 97 aa5.64□□□□□ -1.51
SF3B2-201ENST00000322535 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
SF3B2-201ENST00000322535 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
SF3B2-201ENST00000322535 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
SF3B2-201ENST00000322535 A0A0D9SG42 100 aa5.59□□□□□ -1.51
SF3B2-201ENST00000322535 RYR1P21817 5038 aa5.58□□□□□ -1.52
SF3B2-201ENST00000322535 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
SF3B2-201ENST00000322535 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
SF3B2-201ENST00000322535 Q5VSD8 79 aa5.54□□□□□ -1.52
SF3B2-201ENST00000322535 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
SF3B2-201ENST00000322535 J3QL48 77 aa5.5□□□□□ -1.53
SF3B2-201ENST00000322535 FAT3Q8TDW7 4589 aa5.48□□□□□ -1.53
SF3B2-201ENST00000322535 KRTAP4-5Q9BYR2 181 aa5.47□□□□□ -1.53
SF3B2-201ENST00000322535 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
SF3B2-201ENST00000322535 TNXBP22105 4242 aa5.43□□□□□ -1.54
SF3B2-201ENST00000322535 KRTAP3-1Q9BYR8 98 aa5.42□□□□□ -1.54
SF3B2-201ENST00000322535 ABCA13Q86UQ4 5058 aa5.41□□□□□ -1.54
SF3B2-201ENST00000322535 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
SF3B2-201ENST00000322535 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
SF3B2-201ENST00000322535 HERC2O95714 4834 aa5.36□□□□□ -1.55
SF3B2-201ENST00000322535 LPAP08519 4548 aa5.32□□□□□ -1.56
SF3B2-201ENST00000322535 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
SF3B2-201ENST00000322535 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
SF3B2-201ENST00000322535 PCLOQ9Y6V0 5065 aa5.29□□□□□ -1.56
SF3B2-201ENST00000322535 MT1HL1P0DM35 61 aa5.29□□□□□ -1.56
SF3B2-201ENST00000322535 S4R3F8 94 aa5.29□□□□□ -1.56
SF3B2-201ENST00000322535 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
SF3B2-201ENST00000322535 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
SF3B2-201ENST00000322535 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
SF3B2-201ENST00000322535 HERC1Q15751 4861 aa5.25□□□□□ -1.57
SF3B2-201ENST00000322535 LRP2P98164 4655 aa5.24□□□□□ -1.57
SF3B2-201ENST00000322535 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
SF3B2-201ENST00000322535 XP32Q5T750 250 aa5.21□□□□□ -1.57
SF3B2-201ENST00000322535 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
SF3B2-201ENST00000322535 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
SF3B2-201ENST00000322535 MUC2Q02817 5179 aa5.15□□□□□ -1.58
SF3B2-201ENST00000322535 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
SF3B2-201ENST00000322535 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
SF3B2-201ENST00000322535 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
SF3B2-201ENST00000322535 RNF213Q63HN8 5207 aa5□□□□□ -1.61
SF3B2-201ENST00000322535 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
SF3B2-201ENST00000322535 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
SF3B2-201ENST00000322535 R4GN34 69 aa4.94□□□□□ -1.62
SF3B2-201ENST00000322535 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
SF3B2-201ENST00000322535 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
SF3B2-201ENST00000322535 M0QZ58 72 aa4.87□□□□□ -1.63
SF3B2-201ENST00000322535 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
SF3B2-201ENST00000322535 INE1O15225 51 aa4.69□□□□□ -1.66
SF3B2-201ENST00000322535 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
SF3B2-201ENST00000322535 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
SF3B2-201ENST00000322535 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
SF3B2-201ENST00000322535 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
SF3B2-201ENST00000322535 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
SF3B2-201ENST00000322535 LCE2CQ5TA81 110 aa4.55□□□□□ -1.68
SF3B2-201ENST00000322535 M0R2T5 61 aa4.54□□□□□ -1.68
SF3B2-201ENST00000322535 MT1HP80294 61 aa4.46□□□□□ -1.69
SF3B2-201ENST00000322535 TNP1P09430 55 aa4.45□□□□□ -1.7
SF3B2-201ENST00000322535 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
SF3B2-201ENST00000322535 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
SF3B2-201ENST00000322535 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
SF3B2-201ENST00000322535 USH2AO75445 5202 aa4.33□□□□□ -1.72
SF3B2-201ENST00000322535 MT1FP04733 61 aa4.31□□□□□ -1.72
SF3B2-201ENST00000322535 MT2AP02795 61 aa4.29□□□□□ -1.72
SF3B2-201ENST00000322535 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
SF3B2-201ENST00000322535 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
SF3B2-201ENST00000322535 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
SF3B2-201ENST00000322535 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SF3B2-201ENST00000322535 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
SF3B2-201ENST00000322535 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
SF3B2-201ENST00000322535 LCE2BO14633 110 aa4.08□□□□□ -1.76
SF3B2-201ENST00000322535 KMT2DO14686 5537 aa4.04□□□□□ -1.76
SF3B2-201ENST00000322535 MT1BP07438 61 aa4.04□□□□□ -1.76
SF3B2-201ENST00000322535 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
SF3B2-201ENST00000322535 SSPOA2VEC9 5147 aa3.97□□□□□ -1.77
SF3B2-201ENST00000322535 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
SF3B2-201ENST00000322535 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
SF3B2-201ENST00000322535 MT1XP80297 61 aa3.93□□□□□ -1.78
SF3B2-201ENST00000322535 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
SF3B2-201ENST00000322535 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
SF3B2-201ENST00000322535 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
SF3B2-201ENST00000322535 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
SF3B2-201ENST00000322535 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
SF3B2-201ENST00000322535 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
SF3B2-201ENST00000322535 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
SF3B2-201ENST00000322535 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
SF3B2-201ENST00000322535 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
SF3B2-201ENST00000322535 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
SF3B2-201ENST00000322535 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
SF3B2-201ENST00000322535 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
SF3B2-201ENST00000322535 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
SF3B2-201ENST00000322535 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
SF3B2-201ENST00000322535 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.82
SF3B2-201ENST00000322535 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.82
SF3B2-201ENST00000322535 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms