RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 COX6B2Q6YFQ2 88 aa13.56□□□□□ -0.24
TM6SF1-202ENST00000322019 LCA10Q71F78 164 aa13.54□□□□□ -0.24
TM6SF1-202ENST00000322019 HMCN2Q8NDA2 5059 aa13.5□□□□□ -0.25
TM6SF1-202ENST00000322019 CDC42SE1Q9NRR8 79 aa13.42□□□□□ -0.26
TM6SF1-202ENST00000322019 SEC61BP60468 96 aaKnown RBP13.4□□□□□ -0.26
TM6SF1-202ENST00000322019 A0A1B0GU69 56 aa13.4□□□□□ -0.27
TM6SF1-202ENST00000322019 MUC17Q685J3 4493 aa13.36□□□□□ -0.27
TM6SF1-202ENST00000322019 KRTAP4-1Q9BYQ7 146 aa13.35□□□□□ -0.27
TM6SF1-202ENST00000322019 MUC2Q02817 5179 aa13.33□□□□□ -0.28
TM6SF1-202ENST00000322019 SPTSSBQ8NFR3 76 aa13.28□□□□□ -0.28
TM6SF1-202ENST00000322019 RBM12B-AS1Q9P1G2 102 aa13.21□□□□□ -0.29
TM6SF1-202ENST00000322019 PMAIP1Q13794 54 aa13.19□□□□□ -0.3
TM6SF1-202ENST00000322019 KRTAP3-3Q9BYR6 98 aa13.18□□□□□ -0.3
TM6SF1-202ENST00000322019 H1FX-AS1Q4G0G2 97 aa13.17□□□□□ -0.3
TM6SF1-202ENST00000322019 S4R3F8 94 aa13.16□□□□□ -0.3
TM6SF1-202ENST00000322019 SPATA8Q6RVD6 105 aa13.1□□□□□ -0.31
TM6SF1-202ENST00000322019 UQCR11O14957 56 aa13.08□□□□□ -0.32
TM6SF1-202ENST00000322019 A6NN06 94 aa13.08□□□□□ -0.32
TM6SF1-202ENST00000322019 MIR22HGQ0VDD5 57 aa13.04□□□□□ -0.32
TM6SF1-202ENST00000322019 UBR4Q5T4S7 5183 aa13.04□□□□□ -0.32
TM6SF1-202ENST00000322019 SEC61GP60059 68 aa13.04□□□□□ -0.32
TM6SF1-202ENST00000322019 KRTAP19-2Q3LHN2 52 aa12.93□□□□□ -0.34
TM6SF1-202ENST00000322019 RNF213Q63HN8 5207 aa12.91□□□□□ -0.34
TM6SF1-202ENST00000322019 KTN1-AS1Q86SY8 53 aa12.84□□□□□ -0.35
TM6SF1-202ENST00000322019 H0YAA0 97 aa12.82□□□□□ -0.36
TM6SF1-202ENST00000322019 A0A1B0GU33 70 aa12.79□□□□□ -0.36
TM6SF1-202ENST00000322019 CSAG1Q6PB30 78 aa12.79□□□□□ -0.36
TM6SF1-202ENST00000322019 KRTAP3-2Q9BYR7 98 aa12.76□□□□□ -0.37
TM6SF1-202ENST00000322019 KRTAP10-6P60371 365 aaPredicted RBP12.75□□□□□ -0.37
TM6SF1-202ENST00000322019 FAT4Q6V0I7 4981 aa12.72□□□□□ -0.37
TM6SF1-202ENST00000322019 FLGP20930 4061 aaPredicted RBP12.69□□□□□ -0.38
TM6SF1-202ENST00000322019 P0C880 135 aa12.69□□□□□ -0.38
TM6SF1-202ENST00000322019 ADM2Q7Z4H4 148 aa12.67□□□□□ -0.38
TM6SF1-202ENST00000322019 LCE2CQ5TA81 110 aa12.57□□□□□ -0.4
TM6SF1-202ENST00000322019 KRTAP13-4Q3LI77 160 aa12.52□□□□□ -0.4
TM6SF1-202ENST00000322019 PRAC1Q96KF2 57 aa12.45□□□□□ -0.42
TM6SF1-202ENST00000322019 A0A0D9SG42 100 aa12.33□□□□□ -0.44
TM6SF1-202ENST00000322019 LORP23490 312 aaPredicted RBP12.31□□□□□ -0.44
TM6SF1-202ENST00000322019 MT1HP80294 61 aa12.29□□□□□ -0.44
TM6SF1-202ENST00000322019 M0R2T5 61 aa12.22□□□□□ -0.45
TM6SF1-202ENST00000322019 K7ERS5 55 aa12.18□□□□□ -0.46
TM6SF1-202ENST00000322019 M0QZ58 72 aa12.18□□□□□ -0.46
TM6SF1-202ENST00000322019 R4GN34 69 aa12.16□□□□□ -0.46
TM6SF1-202ENST00000322019 LINC01554Q52M75 96 aa12.09□□□□□ -0.47
TM6SF1-202ENST00000322019 KRTAP12-2P59991 146 aa12.01□□□□□ -0.49
TM6SF1-202ENST00000322019 KRTAP12-1P59990 96 aa11.96□□□□□ -0.49
TM6SF1-202ENST00000322019 SPINT4Q6UDR6 99 aa11.96□□□□□ -0.49
TM6SF1-202ENST00000322019 ROMO1P60602 79 aa11.92□□□□□ -0.5
TM6SF1-202ENST00000322019 KRTAP9-8Q9BYQ0 159 aa11.87□□□□□ -0.51
TM6SF1-202ENST00000322019 MT2AP02795 61 aa11.85□□□□□ -0.51
TM6SF1-202ENST00000322019 KRTAP25-1Q3LHN0 102 aa11.85□□□□□ -0.51
TM6SF1-202ENST00000322019 MT1FP04733 61 aa11.83□□□□□ -0.51
TM6SF1-202ENST00000322019 CRIPTQ9P021 101 aa11.83□□□□□ -0.52
TM6SF1-202ENST00000322019 KRTAP10-10P60014 251 aa11.77□□□□□ -0.52
TM6SF1-202ENST00000322019 KRTAP19-1Q8IUB9 90 aa11.67□□□□□ -0.54
TM6SF1-202ENST00000322019 SPRR2GQ9BYE4 73 aa11.63□□□□□ -0.55
TM6SF1-202ENST00000322019 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
TM6SF1-202ENST00000322019 C10orf95Q9H7T3 257 aa11.51□□□□□ -0.57
TM6SF1-202ENST00000322019 CAMK2N1Q7Z7J9 78 aa11.42□□□□□ -0.58
TM6SF1-202ENST00000322019 KRTAP9-3Q9BYQ3 159 aa11.4□□□□□ -0.58
TM6SF1-202ENST00000322019 PLAC4Q8WY50 150 aa11.29□□□□□ -0.6
TM6SF1-202ENST00000322019 KRTAP19-8Q3LI54 63 aa11.26□□□□□ -0.61
TM6SF1-202ENST00000322019 MT1BP07438 61 aa11.21□□□□□ -0.61
TM6SF1-202ENST00000322019 LCE2BO14633 110 aa11.13□□□□□ -0.63
TM6SF1-202ENST00000322019 USH2AO75445 5202 aa11.11□□□□□ -0.63
TM6SF1-202ENST00000322019 MT1XP80297 61 aa10.91□□□□□ -0.66
TM6SF1-202ENST00000322019 KRTAP10-5P60370 271 aa10.89□□□□□ -0.67
TM6SF1-202ENST00000322019 TNP1P09430 55 aa10.83□□□□□ -0.68
TM6SF1-202ENST00000322019 KRTAP15-1Q3LI76 137 aa10.72□□□□□ -0.69
TM6SF1-202ENST00000322019 FSIP2Q5CZC0 6907 aa10.7□□□□□ -0.7
TM6SF1-202ENST00000322019 PP632Q6XCG6 107 aa10.67□□□□□ -0.7
TM6SF1-202ENST00000322019 SSPOA2VEC9 5147 aa10.59□□□□□ -0.71
TM6SF1-202ENST00000322019 PRO2289Q9P1D8 64 aa10.59□□□□□ -0.71
TM6SF1-202ENST00000322019 KRTAP10-7P60409 375 aaPredicted RBP10.55□□□□□ -0.72
TM6SF1-202ENST00000322019 LCE3AQ5TA76 89 aa10.47□□□□□ -0.73
TM6SF1-202ENST00000322019 KRTAP23-1A1A580 65 aa10.46□□□□□ -0.73
TM6SF1-202ENST00000322019 KMT2DO14686 5537 aa10.39□□□□□ -0.75
TM6SF1-202ENST00000322019 KRTAP10-12P60413 245 aa10.38□□□□□ -0.75
TM6SF1-202ENST00000322019 LCE2DQ5TA82 110 aaPredicted RBP10.34□□□□□ -0.75
TM6SF1-202ENST00000322019 KRTAP19-6Q3LI70 58 aa10.24□□□□□ -0.77
TM6SF1-202ENST00000322019 NDUFAF8A1L188 74 aa10.22□□□□□ -0.77
TM6SF1-202ENST00000322019 KRTAP4-8A0A0G2JLE6 195 aa10.14□□□□□ -0.79
TM6SF1-202ENST00000322019 KRTAP4-8Q9BYQ9 185 aa10.14□□□□□ -0.79
TM6SF1-202ENST00000322019 KRTAP8-1Q8IUC2 63 aa10.13□□□□□ -0.79
TM6SF1-202ENST00000322019 H3BS24 57 aa10.12□□□□□ -0.79
TM6SF1-202ENST00000322019 FCGBPQ9Y6R7 5405 aaPredicted RBP10.09□□□□□ -0.79
TM6SF1-202ENST00000322019 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
TM6SF1-202ENST00000322019 KRTAP12-3P60328 96 aa9.98□□□□□ -0.81
TM6SF1-202ENST00000322019 KRTAP19-5Q3LI72 72 aa9.93□□□□□ -0.82
TM6SF1-202ENST00000322019 SPRR5A0A1B0GTR4 108 aa9.87□□□□□ -0.83
TM6SF1-202ENST00000322019 LUZP6Q538Z0 58 aa9.76□□□□□ -0.85
TM6SF1-202ENST00000322019 KRTAP19-7Q3SYF9 63 aa9.73□□□□□ -0.85
TM6SF1-202ENST00000322019 MACF1Q9UPN3 7388 aaKnown RBP9.65□□□□□ -0.86
TM6SF1-202ENST00000322019 CRCT1Q9UGL9 99 aa9.63□□□□□ -0.87
TM6SF1-202ENST00000322019 MT1EP04732 61 aa9.51□□□□□ -0.89
TM6SF1-202ENST00000322019 MUC12Q9UKN1 5478 aa9.49□□□□□ -0.89
TM6SF1-202ENST00000322019 SYNE2Q8WXH0 6885 aaKnown RBP9.43□□□□□ -0.9
TM6SF1-202ENST00000322019 MT1LQ93083 61 aa9.36□□□□□ -0.91
TM6SF1-202ENST00000322019 LCE3CQ5T5A8 94 aa9.33□□□□□ -0.92
TM6SF1-202ENST00000322019 KRTAP4-7Q9BYR0 210 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms