RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 FAM236AA0A1B0GUQ0 79 aa9.24□□□□□ -0.93
HIGD1A-201ENST00000321331 FAM236BA0A1B0GV22 79 aa9.24□□□□□ -0.93
HIGD1A-201ENST00000321331 SSPOA2VEC9 5147 aa9.22□□□□□ -0.93
HIGD1A-201ENST00000321331 A8MUN3 132 aa9.17□□□□□ -0.94
HIGD1A-201ENST00000321331 H3BPC8 53 aa9.17□□□□□ -0.94
HIGD1A-201ENST00000321331 KLKP1Q107X0 134 aa9.17□□□□□ -0.94
HIGD1A-201ENST00000321331 SMIM20Q8N5G0 67 aa9.15□□□□□ -0.94
HIGD1A-201ENST00000321331 TRAV7A0A075B6U4 112 aa9.13□□□□□ -0.95
HIGD1A-201ENST00000321331 KRTAP19-1Q8IUB9 90 aa9.11□□□□□ -0.95
HIGD1A-201ENST00000321331 NDUFC1O43677 76 aa9.1□□□□□ -0.95
HIGD1A-201ENST00000321331 FCGBPQ9Y6R7 5405 aaPredicted RBP9□□□□□ -0.97
HIGD1A-201ENST00000321331 KRTAP19-6Q3LI70 58 aa8.99□□□□□ -0.97
HIGD1A-201ENST00000321331 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
HIGD1A-201ENST00000321331 H0YAA0 97 aa8.95□□□□□ -0.98
HIGD1A-201ENST00000321331 DMAC1Q96GE9 116 aa8.95□□□□□ -0.98
HIGD1A-201ENST00000321331 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
HIGD1A-201ENST00000321331 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
HIGD1A-201ENST00000321331 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.91□□□□□ -0.98
HIGD1A-201ENST00000321331 SNURFQ9Y675 71 aa8.89□□□□□ -0.99
HIGD1A-201ENST00000321331 Q5VV11 94 aa8.87□□□□□ -0.99
HIGD1A-201ENST00000321331 C20orf197Q8N268 126 aa8.87□□□□□ -0.99
HIGD1A-201ENST00000321331 KRTAP19-8Q3LI54 63 aa8.85□□□□□ -0.99
HIGD1A-201ENST00000321331 ADM2Q7Z4H4 148 aa8.85□□□□□ -0.99
HIGD1A-201ENST00000321331 COX7CP15954 63 aa8.83□□□□□ -1
HIGD1A-201ENST00000321331 MT1BP07438 61 aa8.81□□□□□ -1
HIGD1A-201ENST00000321331 ACYP2P14621 99 aa8.8□□□□□ -1
HIGD1A-201ENST00000321331 KRTAP4-8Q9BYQ9 185 aa8.79□□□□□ -1
HIGD1A-201ENST00000321331 KRTAP9-7A8MTY7 169 aa8.75□□□□□ -1.01
HIGD1A-201ENST00000321331 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
HIGD1A-201ENST00000321331 SPANXA2-OT1Q8N9U9 137 aa8.73□□□□□ -1.01
HIGD1A-201ENST00000321331 A6NN06 94 aa8.69□□□□□ -1.02
HIGD1A-201ENST00000321331 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
HIGD1A-201ENST00000321331 MACF1Q9UPN3 7388 aaKnown RBP8.68□□□□□ -1.02
HIGD1A-201ENST00000321331 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
HIGD1A-201ENST00000321331 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
HIGD1A-201ENST00000321331 P0C880 135 aa8.64□□□□□ -1.03
HIGD1A-201ENST00000321331 R4GN34 69 aa8.63□□□□□ -1.03
HIGD1A-201ENST00000321331 H7BZZ5 65 aa8.62□□□□□ -1.03
HIGD1A-201ENST00000321331 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
HIGD1A-201ENST00000321331 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
HIGD1A-201ENST00000321331 M0QZ58 72 aa8.56□□□□□ -1.04
HIGD1A-201ENST00000321331 SYNE2Q8WXH0 6885 aaKnown RBP8.56□□□□□ -1.04
HIGD1A-201ENST00000321331 KRTAP4-12Q9BQ66 201 aa8.52□□□□□ -1.05
HIGD1A-201ENST00000321331 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
HIGD1A-201ENST00000321331 COA5Q86WW8 74 aa8.45□□□□□ -1.06
HIGD1A-201ENST00000321331 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
HIGD1A-201ENST00000321331 H3BS24 57 aa8.41□□□□□ -1.06
HIGD1A-201ENST00000321331 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
HIGD1A-201ENST00000321331 LCE3BQ5TA77 95 aa8.41□□□□□ -1.06
HIGD1A-201ENST00000321331 PRO2289Q9P1D8 64 aa8.41□□□□□ -1.06
HIGD1A-201ENST00000321331 ATP5EP56381 51 aaPredicted RBP8.33□□□□□ -1.08
HIGD1A-201ENST00000321331 MT1XP80297 61 aa8.32□□□□□ -1.08
HIGD1A-201ENST00000321331 TMEM258P61165 79 aa8.27□□□□□ -1.09
HIGD1A-201ENST00000321331 SEC61GP60059 68 aa8.22□□□□□ -1.09
HIGD1A-201ENST00000321331 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
HIGD1A-201ENST00000321331 KRTAP19-4Q3LI73 84 aa8.18□□□□□ -1.1
HIGD1A-201ENST00000321331 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
HIGD1A-201ENST00000321331 KRTAP9-9Q9BYP9 154 aa8.14□□□□□ -1.11
HIGD1A-201ENST00000321331 KRTAP9-4Q9BYQ2 154 aa8.14□□□□□ -1.11
HIGD1A-201ENST00000321331 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
HIGD1A-201ENST00000321331 KRTAP5-9P26371 169 aa8.1□□□□□ -1.11
HIGD1A-201ENST00000321331 MUC12Q9UKN1 5478 aa8.08□□□□□ -1.12
HIGD1A-201ENST00000321331 PCP4P48539 62 aa8.07□□□□□ -1.12
HIGD1A-201ENST00000321331 KMT2DO14686 5537 aa8.07□□□□□ -1.12
HIGD1A-201ENST00000321331 KRTAP4-8A0A0G2JLE6 195 aa8.02□□□□□ -1.13
HIGD1A-201ENST00000321331 A0A1B0GU33 70 aa8.02□□□□□ -1.13
HIGD1A-201ENST00000321331 NEBP20929 6669 aa8.01□□□□□ -1.13
HIGD1A-201ENST00000321331 A0A1B0GU69 56 aa7.98□□□□□ -1.13
HIGD1A-201ENST00000321331 KRTAP8-1Q8IUC2 63 aa7.98□□□□□ -1.13
HIGD1A-201ENST00000321331 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
HIGD1A-201ENST00000321331 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
HIGD1A-201ENST00000321331 A0A0D9SG42 100 aa7.96□□□□□ -1.14
HIGD1A-201ENST00000321331 KRTAP10-7P60409 375 aaPredicted RBP7.94□□□□□ -1.14
HIGD1A-201ENST00000321331 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
HIGD1A-201ENST00000321331 LINC01558Q9Y6Z2 57 aa7.93□□□□□ -1.14
HIGD1A-201ENST00000321331 KRTAP10-12P60413 245 aa7.92□□□□□ -1.14
HIGD1A-201ENST00000321331 MDN1Q9NU22 5596 aa7.91□□□□□ -1.14
HIGD1A-201ENST00000321331 LCE1DQ5T752 114 aa7.89□□□□□ -1.15
HIGD1A-201ENST00000321331 PRR15LQ9BU68 103 aa7.86□□□□□ -1.15
HIGD1A-201ENST00000321331 SPINT4Q6UDR6 99 aa7.85□□□□□ -1.15
HIGD1A-201ENST00000321331 SMIM26A0A096LP01 95 aa7.83□□□□□ -1.16
HIGD1A-201ENST00000321331 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
HIGD1A-201ENST00000321331 SPRR2EP22531 72 aa7.77□□□□□ -1.17
HIGD1A-201ENST00000321331 SPRR2BP35325 72 aa7.77□□□□□ -1.17
HIGD1A-201ENST00000321331 SPRR2AP35326 72 aa7.77□□□□□ -1.17
HIGD1A-201ENST00000321331 LCE4AQ5TA78 99 aa7.75□□□□□ -1.17
HIGD1A-201ENST00000321331 KRTAP4-7Q9BYR0 210 aa7.73□□□□□ -1.17
HIGD1A-201ENST00000321331 RPS28P62857 69 aaKnown RBP7.72□□□□□ -1.17
HIGD1A-201ENST00000321331 Q1T7F1 81 aa7.72□□□□□ -1.17
HIGD1A-201ENST00000321331 V9GYY9 64 aa7.72□□□□□ -1.17
HIGD1A-201ENST00000321331 A8MU10 97 aa7.71□□□□□ -1.18
HIGD1A-201ENST00000321331 KRTAP20-1Q3LI63 56 aa7.71□□□□□ -1.18
HIGD1A-201ENST00000321331 LCE1AQ5T7P2 110 aa7.67□□□□□ -1.18
HIGD1A-201ENST00000321331 UQCR11O14957 56 aa7.63□□□□□ -1.19
HIGD1A-201ENST00000321331 KRTAP4-9Q9BYQ8 210 aa7.61□□□□□ -1.19
HIGD1A-201ENST00000321331 PSPHP1O15172 72 aa7.6□□□□□ -1.19
HIGD1A-201ENST00000321331 KRTAP2-3P0C7H8 128 aa7.57□□□□□ -1.2
HIGD1A-201ENST00000321331 KRTAP2-4Q9BYR9 128 aa7.57□□□□□ -1.2
HIGD1A-201ENST00000321331 SPRR2DP22532 72 aa7.5□□□□□ -1.21
HIGD1A-201ENST00000321331 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms