RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 MP68P56378 58 aa6.79□□□□□ -1.32
TUBA3D-201ENST00000321253 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
TUBA3D-201ENST00000321253 OCR1Q9BZK8 76 aa6.79□□□□□ -1.32
TUBA3D-201ENST00000321253 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
TUBA3D-201ENST00000321253 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
TUBA3D-201ENST00000321253 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
TUBA3D-201ENST00000321253 COX7CP15954 63 aa6.75□□□□□ -1.33
TUBA3D-201ENST00000321253 TRAV7A0A075B6U4 112 aa6.74□□□□□ -1.33
TUBA3D-201ENST00000321253 SERP2Q8N6R1 65 aa6.74□□□□□ -1.33
TUBA3D-201ENST00000321253 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
TUBA3D-201ENST00000321253 A8MUN3 132 aa6.71□□□□□ -1.33
TUBA3D-201ENST00000321253 KLKP1Q107X0 134 aa6.71□□□□□ -1.33
TUBA3D-201ENST00000321253 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
TUBA3D-201ENST00000321253 H3BPC8 53 aa6.69□□□□□ -1.34
TUBA3D-201ENST00000321253 NDUFC1O43677 76 aa6.69□□□□□ -1.34
TUBA3D-201ENST00000321253 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
TUBA3D-201ENST00000321253 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
TUBA3D-201ENST00000321253 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
TUBA3D-201ENST00000321253 SVIPQ8NHG7 77 aa6.6□□□□□ -1.35
TUBA3D-201ENST00000321253 CRIPTQ9P021 101 aa6.58□□□□□ -1.36
TUBA3D-201ENST00000321253 SNURFQ9Y675 71 aa6.58□□□□□ -1.36
TUBA3D-201ENST00000321253 TMEM258P61165 79 aa6.57□□□□□ -1.36
TUBA3D-201ENST00000321253 Q5VV11 94 aa6.57□□□□□ -1.36
TUBA3D-201ENST00000321253 H0YAA0 97 aa6.56□□□□□ -1.36
TUBA3D-201ENST00000321253 DMAC1Q96GE9 116 aa6.55□□□□□ -1.36
TUBA3D-201ENST00000321253 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
TUBA3D-201ENST00000321253 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
TUBA3D-201ENST00000321253 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
TUBA3D-201ENST00000321253 ADM2Q7Z4H4 148 aa6.52□□□□□ -1.37
TUBA3D-201ENST00000321253 MT1BP07438 61 aa6.51□□□□□ -1.37
TUBA3D-201ENST00000321253 RPS28P62857 69 aaKnown RBP6.51□□□□□ -1.37
TUBA3D-201ENST00000321253 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
TUBA3D-201ENST00000321253 H7BZZ5 65 aa6.46□□□□□ -1.37
TUBA3D-201ENST00000321253 A6NN06 94 aa6.45□□□□□ -1.38
TUBA3D-201ENST00000321253 ACYP2P14621 99 aa6.43□□□□□ -1.38
TUBA3D-201ENST00000321253 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
TUBA3D-201ENST00000321253 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
TUBA3D-201ENST00000321253 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
TUBA3D-201ENST00000321253 R4GN34 69 aa6.36□□□□□ -1.39
TUBA3D-201ENST00000321253 P0C880 135 aa6.35□□□□□ -1.39
TUBA3D-201ENST00000321253 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
TUBA3D-201ENST00000321253 SPANXA2-OT1Q8N9U9 137 aa6.35□□□□□ -1.39
TUBA3D-201ENST00000321253 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
TUBA3D-201ENST00000321253 M0QZ58 72 aa6.3□□□□□ -1.4
TUBA3D-201ENST00000321253 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
TUBA3D-201ENST00000321253 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
TUBA3D-201ENST00000321253 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
TUBA3D-201ENST00000321253 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
TUBA3D-201ENST00000321253 LINC01554Q52M75 96 aa6.22□□□□□ -1.41
TUBA3D-201ENST00000321253 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
TUBA3D-201ENST00000321253 COA5Q86WW8 74 aa6.17□□□□□ -1.42
TUBA3D-201ENST00000321253 MT1XP80297 61 aa6.15□□□□□ -1.43
TUBA3D-201ENST00000321253 NEBP20929 6669 aa6.13□□□□□ -1.43
TUBA3D-201ENST00000321253 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
TUBA3D-201ENST00000321253 Q1T7F1 81 aa6.06□□□□□ -1.44
TUBA3D-201ENST00000321253 V9GYY9 64 aa6.04□□□□□ -1.44
TUBA3D-201ENST00000321253 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
TUBA3D-201ENST00000321253 SEC61GP60059 68 aa6.02□□□□□ -1.45
TUBA3D-201ENST00000321253 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
TUBA3D-201ENST00000321253 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
TUBA3D-201ENST00000321253 KMT2DO14686 5537 aa5.96□□□□□ -1.46
TUBA3D-201ENST00000321253 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
TUBA3D-201ENST00000321253 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
TUBA3D-201ENST00000321253 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
TUBA3D-201ENST00000321253 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
TUBA3D-201ENST00000321253 MDN1Q9NU22 5596 aa5.9□□□□□ -1.47
TUBA3D-201ENST00000321253 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
TUBA3D-201ENST00000321253 CAMK2N1Q7Z7J9 78 aa5.88□□□□□ -1.47
TUBA3D-201ENST00000321253 PRR15LQ9BU68 103 aa5.88□□□□□ -1.47
TUBA3D-201ENST00000321253 A0A1B0GU33 70 aa5.87□□□□□ -1.47
TUBA3D-201ENST00000321253 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
TUBA3D-201ENST00000321253 PSPHP1O15172 72 aa5.86□□□□□ -1.47
TUBA3D-201ENST00000321253 A0A1B0GU69 56 aa5.85□□□□□ -1.47
TUBA3D-201ENST00000321253 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
TUBA3D-201ENST00000321253 A0A0D9SG42 100 aa5.84□□□□□ -1.47
TUBA3D-201ENST00000321253 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.48
TUBA3D-201ENST00000321253 KRTAP10-12P60413 245 aa5.84□□□□□ -1.48
TUBA3D-201ENST00000321253 SPATA8Q6RVD6 105 aa5.84□□□□□ -1.48
TUBA3D-201ENST00000321253 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.48
TUBA3D-201ENST00000321253 SPRR2EP22531 72 aa5.79□□□□□ -1.48
TUBA3D-201ENST00000321253 SPRR2BP35325 72 aa5.79□□□□□ -1.48
TUBA3D-201ENST00000321253 SPRR2AP35326 72 aa5.79□□□□□ -1.48
TUBA3D-201ENST00000321253 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
TUBA3D-201ENST00000321253 A6NED7 52 aa5.7□□□□□ -1.5
TUBA3D-201ENST00000321253 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
TUBA3D-201ENST00000321253 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
TUBA3D-201ENST00000321253 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
TUBA3D-201ENST00000321253 UQCR11O14957 56 aa5.66□□□□□ -1.5
TUBA3D-201ENST00000321253 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
TUBA3D-201ENST00000321253 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
TUBA3D-201ENST00000321253 A8MU10 97 aa5.64□□□□□ -1.51
TUBA3D-201ENST00000321253 SPRR2DP22532 72 aa5.6□□□□□ -1.51
TUBA3D-201ENST00000321253 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
TUBA3D-201ENST00000321253 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
TUBA3D-201ENST00000321253 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
TUBA3D-201ENST00000321253 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
TUBA3D-201ENST00000321253 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
TUBA3D-201ENST00000321253 MT1EP04732 61 aa5.45□□□□□ -1.54
TUBA3D-201ENST00000321253 TNP1P09430 55 aa5.44□□□□□ -1.54
TUBA3D-201ENST00000321253 KTN1-AS1Q86SY8 53 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms