RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 MT1HL1P0DM35 61 aa10.12□□□□□ -0.79
HCCS-201ENST00000321143 KRTAP3-1Q9BYR8 98 aa10.12□□□□□ -0.79
HCCS-201ENST00000321143 SEC61GP60059 68 aa10.1□□□□□ -0.79
HCCS-201ENST00000321143 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
HCCS-201ENST00000321143 PCLOQ9Y6V0 5065 aa9.98□□□□□ -0.81
HCCS-201ENST00000321143 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
HCCS-201ENST00000321143 RPL37P61927 97 aaKnown RBP9.89□□□□□ -0.83
HCCS-201ENST00000321143 LPAP08519 4548 aa9.88□□□□□ -0.83
HCCS-201ENST00000321143 H0YAA0 97 aa9.85□□□□□ -0.83
HCCS-201ENST00000321143 XP32Q5T750 250 aa9.85□□□□□ -0.83
HCCS-201ENST00000321143 A0A1B0GU33 70 aa9.85□□□□□ -0.83
HCCS-201ENST00000321143 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
HCCS-201ENST00000321143 ADM2Q7Z4H4 148 aa9.81□□□□□ -0.84
HCCS-201ENST00000321143 PRAC1Q96KF2 57 aa9.81□□□□□ -0.84
HCCS-201ENST00000321143 HERC1Q15751 4861 aa9.8□□□□□ -0.84
HCCS-201ENST00000321143 LRP2P98164 4655 aa9.79□□□□□ -0.84
HCCS-201ENST00000321143 J3QL48 77 aa9.76□□□□□ -0.85
HCCS-201ENST00000321143 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
HCCS-201ENST00000321143 S4R3F8 94 aa9.64□□□□□ -0.87
HCCS-201ENST00000321143 KRTAP10-6P60371 365 aaPredicted RBP9.59□□□□□ -0.87
HCCS-201ENST00000321143 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
HCCS-201ENST00000321143 TPRXLQ17RH7 258 aa9.53□□□□□ -0.88
HCCS-201ENST00000321143 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
HCCS-201ENST00000321143 K7ERS5 55 aa9.51□□□□□ -0.89
HCCS-201ENST00000321143 HMCN2Q8NDA2 5059 aa9.51□□□□□ -0.89
HCCS-201ENST00000321143 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.9
HCCS-201ENST00000321143 LINC01554Q52M75 96 aa9.45□□□□□ -0.9
HCCS-201ENST00000321143 P0C880 135 aa9.41□□□□□ -0.9
HCCS-201ENST00000321143 MUC2Q02817 5179 aa9.39□□□□□ -0.91
HCCS-201ENST00000321143 A0A0D9SG42 100 aa9.38□□□□□ -0.91
HCCS-201ENST00000321143 KRTAP25-1Q3LHN0 102 aa9.33□□□□□ -0.92
HCCS-201ENST00000321143 MUC17Q685J3 4493 aa9.29□□□□□ -0.92
HCCS-201ENST00000321143 ROMO1P60602 79 aa9.27□□□□□ -0.93
HCCS-201ENST00000321143 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
HCCS-201ENST00000321143 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
HCCS-201ENST00000321143 CRIPTQ9P021 101 aa9.2□□□□□ -0.94
HCCS-201ENST00000321143 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
HCCS-201ENST00000321143 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
HCCS-201ENST00000321143 KRTAP12-2P59991 146 aa9.15□□□□□ -0.94
HCCS-201ENST00000321143 M0QZ58 72 aa9.14□□□□□ -0.95
HCCS-201ENST00000321143 KRTAP12-1P59990 96 aa9.1□□□□□ -0.95
HCCS-201ENST00000321143 SPINT4Q6UDR6 99 aa9.08□□□□□ -0.96
HCCS-201ENST00000321143 FAT4Q6V0I7 4981 aa8.99□□□□□ -0.97
HCCS-201ENST00000321143 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
HCCS-201ENST00000321143 R4GN34 69 aa8.93□□□□□ -0.98
HCCS-201ENST00000321143 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
HCCS-201ENST00000321143 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
HCCS-201ENST00000321143 FLGP20930 4061 aaPredicted RBP8.81□□□□□ -1
HCCS-201ENST00000321143 LCE2CQ5TA81 110 aa8.74□□□□□ -1.01
HCCS-201ENST00000321143 MT1HP80294 61 aa8.52□□□□□ -1.04
HCCS-201ENST00000321143 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
HCCS-201ENST00000321143 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.05
HCCS-201ENST00000321143 M0R2T5 61 aa8.41□□□□□ -1.06
HCCS-201ENST00000321143 H3BS24 57 aa8.4□□□□□ -1.07
HCCS-201ENST00000321143 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
HCCS-201ENST00000321143 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
HCCS-201ENST00000321143 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
HCCS-201ENST00000321143 MT2AP02795 61 aa8.19□□□□□ -1.1
HCCS-201ENST00000321143 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
HCCS-201ENST00000321143 NDUFAF8A1L188 74 aa8.18□□□□□ -1.1
HCCS-201ENST00000321143 MT1FP04733 61 aa8.18□□□□□ -1.1
HCCS-201ENST00000321143 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
HCCS-201ENST00000321143 SPRR2GQ9BYE4 73 aa8.17□□□□□ -1.1
HCCS-201ENST00000321143 TNP1P09430 55 aa8.14□□□□□ -1.11
HCCS-201ENST00000321143 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
HCCS-201ENST00000321143 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
HCCS-201ENST00000321143 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
HCCS-201ENST00000321143 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
HCCS-201ENST00000321143 USH2AO75445 5202 aa7.84□□□□□ -1.15
HCCS-201ENST00000321143 KRTAP19-8Q3LI54 63 aa7.83□□□□□ -1.16
HCCS-201ENST00000321143 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
HCCS-201ENST00000321143 LCE2BO14633 110 aa7.76□□□□□ -1.17
HCCS-201ENST00000321143 MT1BP07438 61 aa7.72□□□□□ -1.17
HCCS-201ENST00000321143 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
HCCS-201ENST00000321143 FSIP2Q5CZC0 6907 aa7.7□□□□□ -1.18
HCCS-201ENST00000321143 KRTAP10-5P60370 271 aa7.65□□□□□ -1.18
HCCS-201ENST00000321143 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
HCCS-201ENST00000321143 MT1XP80297 61 aa7.64□□□□□ -1.19
HCCS-201ENST00000321143 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
HCCS-201ENST00000321143 SSPOA2VEC9 5147 aa7.52□□□□□ -1.21
HCCS-201ENST00000321143 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
HCCS-201ENST00000321143 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
HCCS-201ENST00000321143 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.23
HCCS-201ENST00000321143 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
HCCS-201ENST00000321143 KMT2DO14686 5537 aa7.27□□□□□ -1.25
HCCS-201ENST00000321143 A0A0A0MQY5 61 aa7.27□□□□□ -1.25
HCCS-201ENST00000321143 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
HCCS-201ENST00000321143 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
HCCS-201ENST00000321143 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
HCCS-201ENST00000321143 KRTAP19-5Q3LI72 72 aa7.09□□□□□ -1.27
HCCS-201ENST00000321143 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
HCCS-201ENST00000321143 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
HCCS-201ENST00000321143 LCE3CQ5T5A8 94 aa6.92□□□□□ -1.3
HCCS-201ENST00000321143 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
HCCS-201ENST00000321143 MACF1Q9UPN3 7388 aaKnown RBP6.87□□□□□ -1.31
HCCS-201ENST00000321143 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
HCCS-201ENST00000321143 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
HCCS-201ENST00000321143 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
HCCS-201ENST00000321143 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
HCCS-201ENST00000321143 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms