RNA–Protein interactions for RNA: ENST00000321046.9

NR1H4-202, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

TSL 1 (best)

Gene NR1H4, Length 1,779 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-202ENST00000321046 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
NR1H4-202ENST00000321046 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
NR1H4-202ENST00000321046 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
NR1H4-202ENST00000321046 ATOX1O00244 68 aa6.52□□□□□ -1.37
NR1H4-202ENST00000321046 KTN1-AS1Q86SY8 53 aa6.5□□□□□ -1.37
NR1H4-202ENST00000321046 C1orf64Q8NEQ6 169 aa6.5□□□□□ -1.37
NR1H4-202ENST00000321046 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
NR1H4-202ENST00000321046 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
NR1H4-202ENST00000321046 MP68P56378 58 aa6.46□□□□□ -1.37
NR1H4-202ENST00000321046 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.37
NR1H4-202ENST00000321046 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.37
NR1H4-202ENST00000321046 KLKP1Q107X0 134 aa6.46□□□□□ -1.38
NR1H4-202ENST00000321046 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
NR1H4-202ENST00000321046 SERP2Q8N6R1 65 aa6.44□□□□□ -1.38
NR1H4-202ENST00000321046 MT2AP02795 61 aa6.42□□□□□ -1.38
NR1H4-202ENST00000321046 MT1FP04733 61 aa6.39□□□□□ -1.39
NR1H4-202ENST00000321046 TRAV7A0A075B6U4 112 aa6.39□□□□□ -1.39
NR1H4-202ENST00000321046 S4R3F8 94 aa6.39□□□□□ -1.39
NR1H4-202ENST00000321046 LCA10Q71F78 164 aa6.38□□□□□ -1.39
NR1H4-202ENST00000321046 H3BPC8 53 aa6.37□□□□□ -1.39
NR1H4-202ENST00000321046 ATP5EP56381 51 aaPredicted RBP6.36□□□□□ -1.39
NR1H4-202ENST00000321046 A8MUN3 132 aa6.35□□□□□ -1.39
NR1H4-202ENST00000321046 KRTAP10-10P60014 251 aa6.33□□□□□ -1.4
NR1H4-202ENST00000321046 USH2AO75445 5202 aa6.32□□□□□ -1.4
NR1H4-202ENST00000321046 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
NR1H4-202ENST00000321046 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
NR1H4-202ENST00000321046 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
NR1H4-202ENST00000321046 H7BZZ5 65 aa6.26□□□□□ -1.41
NR1H4-202ENST00000321046 C20orf197Q8N268 126 aa6.26□□□□□ -1.41
NR1H4-202ENST00000321046 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
NR1H4-202ENST00000321046 SSPOA2VEC9 5147 aa6.21□□□□□ -1.42
NR1H4-202ENST00000321046 NDUFC1O43677 76 aa6.21□□□□□ -1.42
NR1H4-202ENST00000321046 Q1T7F1 81 aa6.18□□□□□ -1.42
NR1H4-202ENST00000321046 A6NN06 94 aa6.16□□□□□ -1.42
NR1H4-202ENST00000321046 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
NR1H4-202ENST00000321046 PSPHP1O15172 72 aa6.14□□□□□ -1.43
NR1H4-202ENST00000321046 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
NR1H4-202ENST00000321046 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
NR1H4-202ENST00000321046 ACYP2P14621 99 aa6.09□□□□□ -1.43
NR1H4-202ENST00000321046 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.43
NR1H4-202ENST00000321046 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
NR1H4-202ENST00000321046 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
NR1H4-202ENST00000321046 H0YAA0 97 aa6.05□□□□□ -1.44
NR1H4-202ENST00000321046 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
NR1H4-202ENST00000321046 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
NR1H4-202ENST00000321046 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
NR1H4-202ENST00000321046 P0C880 135 aa5.98□□□□□ -1.45
NR1H4-202ENST00000321046 COA5Q86WW8 74 aa5.95□□□□□ -1.46
NR1H4-202ENST00000321046 CRIPTQ9P021 101 aa5.95□□□□□ -1.46
NR1H4-202ENST00000321046 SPTSSBQ8NFR3 76 aa5.93□□□□□ -1.46
NR1H4-202ENST00000321046 MT1BP07438 61 aa5.93□□□□□ -1.46
NR1H4-202ENST00000321046 Q5VV11 94 aa5.93□□□□□ -1.46
NR1H4-202ENST00000321046 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
NR1H4-202ENST00000321046 A8MU10 97 aa5.91□□□□□ -1.46
NR1H4-202ENST00000321046 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
NR1H4-202ENST00000321046 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
NR1H4-202ENST00000321046 R4GN34 69 aa5.85□□□□□ -1.47
NR1H4-202ENST00000321046 M0QZ58 72 aa5.84□□□□□ -1.47
NR1H4-202ENST00000321046 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
NR1H4-202ENST00000321046 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
NR1H4-202ENST00000321046 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
NR1H4-202ENST00000321046 A6NED7 52 aa5.73□□□□□ -1.49
NR1H4-202ENST00000321046 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
NR1H4-202ENST00000321046 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
NR1H4-202ENST00000321046 ROMO1P60602 79 aa5.7□□□□□ -1.5
NR1H4-202ENST00000321046 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
NR1H4-202ENST00000321046 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
NR1H4-202ENST00000321046 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
NR1H4-202ENST00000321046 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
NR1H4-202ENST00000321046 MT1XP80297 61 aa5.63□□□□□ -1.51
NR1H4-202ENST00000321046 A0A1B0GU69 56 aa5.62□□□□□ -1.51
NR1H4-202ENST00000321046 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
NR1H4-202ENST00000321046 A0A1B0GU33 70 aa5.6□□□□□ -1.51
NR1H4-202ENST00000321046 A0A0D9SG42 100 aa5.55□□□□□ -1.52
NR1H4-202ENST00000321046 KMT2DO14686 5537 aa5.55□□□□□ -1.52
NR1H4-202ENST00000321046 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
NR1H4-202ENST00000321046 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
NR1H4-202ENST00000321046 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
NR1H4-202ENST00000321046 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
NR1H4-202ENST00000321046 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
NR1H4-202ENST00000321046 K7ERS5 55 aa5.47□□□□□ -1.53
NR1H4-202ENST00000321046 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
NR1H4-202ENST00000321046 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
NR1H4-202ENST00000321046 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
NR1H4-202ENST00000321046 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
NR1H4-202ENST00000321046 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
NR1H4-202ENST00000321046 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
NR1H4-202ENST00000321046 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
NR1H4-202ENST00000321046 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
NR1H4-202ENST00000321046 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
NR1H4-202ENST00000321046 LCE3BQ5TA77 95 aa5.34□□□□□ -1.56
NR1H4-202ENST00000321046 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
NR1H4-202ENST00000321046 UQCR11O14957 56 aa5.33□□□□□ -1.56
NR1H4-202ENST00000321046 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
NR1H4-202ENST00000321046 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
NR1H4-202ENST00000321046 NEBP20929 6669 aa5.31□□□□□ -1.56
NR1H4-202ENST00000321046 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
NR1H4-202ENST00000321046 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
NR1H4-202ENST00000321046 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
NR1H4-202ENST00000321046 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms