RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 A8MUN3 132 aa8.7□□□□□ -1.02
CIRBP-201ENST00000320936 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
CIRBP-201ENST00000320936 SMIM20Q8N5G0 67 aa8.66□□□□□ -1.02
CIRBP-201ENST00000320936 NDUFC1O43677 76 aa8.64□□□□□ -1.03
CIRBP-201ENST00000320936 TRAV7A0A075B6U4 112 aa8.63□□□□□ -1.03
CIRBP-201ENST00000320936 SSPOA2VEC9 5147 aa8.56□□□□□ -1.04
CIRBP-201ENST00000320936 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
CIRBP-201ENST00000320936 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
CIRBP-201ENST00000320936 SNURFQ9Y675 71 aa8.47□□□□□ -1.05
CIRBP-201ENST00000320936 SERP2Q8N6R1 65 aa8.43□□□□□ -1.06
CIRBP-201ENST00000320936 H0YAA0 97 aa8.42□□□□□ -1.06
CIRBP-201ENST00000320936 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
CIRBP-201ENST00000320936 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
CIRBP-201ENST00000320936 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
CIRBP-201ENST00000320936 CRIPTQ9P021 101 aa8.4□□□□□ -1.06
CIRBP-201ENST00000320936 ACYP2P14621 99 aa8.39□□□□□ -1.07
CIRBP-201ENST00000320936 KRTAP19-6Q3LI70 58 aa8.38□□□□□ -1.07
CIRBP-201ENST00000320936 Q5VV11 94 aa8.37□□□□□ -1.07
CIRBP-201ENST00000320936 FCGBPQ9Y6R7 5405 aaPredicted RBP8.35□□□□□ -1.07
CIRBP-201ENST00000320936 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
CIRBP-201ENST00000320936 KRTAP19-8Q3LI54 63 aa8.3□□□□□ -1.08
CIRBP-201ENST00000320936 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
CIRBP-201ENST00000320936 MT1BP07438 61 aa8.29□□□□□ -1.08
CIRBP-201ENST00000320936 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
CIRBP-201ENST00000320936 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
CIRBP-201ENST00000320936 P0C880 135 aa8.23□□□□□ -1.09
CIRBP-201ENST00000320936 COX7CP15954 63 aa8.23□□□□□ -1.09
CIRBP-201ENST00000320936 R4GN34 69 aa8.2□□□□□ -1.1
CIRBP-201ENST00000320936 A6NN06 94 aa8.17□□□□□ -1.1
CIRBP-201ENST00000320936 M0QZ58 72 aa8.15□□□□□ -1.1
CIRBP-201ENST00000320936 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CIRBP-201ENST00000320936 KRTAP9-7A8MTY7 169 aa8.13□□□□□ -1.11
CIRBP-201ENST00000320936 ANAPC13Q9BS18 74 aa8.12□□□□□ -1.11
CIRBP-201ENST00000320936 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
CIRBP-201ENST00000320936 LINC01554Q52M75 96 aa8.06□□□□□ -1.12
CIRBP-201ENST00000320936 COA5Q86WW8 74 aa8.06□□□□□ -1.12
CIRBP-201ENST00000320936 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
CIRBP-201ENST00000320936 CYSTM1Q9H1C7 97 aa8.05□□□□□ -1.12
CIRBP-201ENST00000320936 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
CIRBP-201ENST00000320936 H7BZZ5 65 aa8.03□□□□□ -1.12
CIRBP-201ENST00000320936 SYNE2Q8WXH0 6885 aaKnown RBP7.92□□□□□ -1.14
CIRBP-201ENST00000320936 PRO2289Q9P1D8 64 aa7.92□□□□□ -1.14
CIRBP-201ENST00000320936 CCDC179H3BU77 68 aa7.91□□□□□ -1.14
CIRBP-201ENST00000320936 SEC61GP60059 68 aa7.88□□□□□ -1.15
CIRBP-201ENST00000320936 MT1XP80297 61 aa7.84□□□□□ -1.15
CIRBP-201ENST00000320936 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
CIRBP-201ENST00000320936 KRTAP6-3Q3LI67 103 aa7.81□□□□□ -1.16
CIRBP-201ENST00000320936 ATP5EP56381 51 aaPredicted RBP7.77□□□□□ -1.17
CIRBP-201ENST00000320936 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
CIRBP-201ENST00000320936 A0A1B0GU33 70 aa7.67□□□□□ -1.18
CIRBP-201ENST00000320936 A0A1B0GU69 56 aa7.67□□□□□ -1.18
CIRBP-201ENST00000320936 A0A0D9SG42 100 aa7.65□□□□□ -1.18
CIRBP-201ENST00000320936 TMEM258P61165 79 aa7.64□□□□□ -1.19
CIRBP-201ENST00000320936 SPATA8Q6RVD6 105 aa7.64□□□□□ -1.19
CIRBP-201ENST00000320936 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
CIRBP-201ENST00000320936 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
CIRBP-201ENST00000320936 KRTAP5-9P26371 169 aa7.53□□□□□ -1.2
CIRBP-201ENST00000320936 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
CIRBP-201ENST00000320936 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
CIRBP-201ENST00000320936 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
CIRBP-201ENST00000320936 KMT2DO14686 5537 aa7.51□□□□□ -1.21
CIRBP-201ENST00000320936 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
CIRBP-201ENST00000320936 SMIM26A0A096LP01 95 aa7.48□□□□□ -1.21
CIRBP-201ENST00000320936 SPRR2FQ96RM1 72 aa7.47□□□□□ -1.21
CIRBP-201ENST00000320936 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
CIRBP-201ENST00000320936 MUC12Q9UKN1 5478 aa7.43□□□□□ -1.22
CIRBP-201ENST00000320936 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
CIRBP-201ENST00000320936 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
CIRBP-201ENST00000320936 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
CIRBP-201ENST00000320936 NEBP20929 6669 aa7.42□□□□□ -1.22
CIRBP-201ENST00000320936 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
CIRBP-201ENST00000320936 A8MU10 97 aa7.4□□□□□ -1.22
CIRBP-201ENST00000320936 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
CIRBP-201ENST00000320936 SPRR2EP22531 72 aa7.3□□□□□ -1.24
CIRBP-201ENST00000320936 SPRR2BP35325 72 aa7.3□□□□□ -1.24
CIRBP-201ENST00000320936 SPRR2AP35326 72 aa7.3□□□□□ -1.24
CIRBP-201ENST00000320936 UQCR11O14957 56 aa7.26□□□□□ -1.25
CIRBP-201ENST00000320936 V9GYY9 64 aa7.19□□□□□ -1.26
CIRBP-201ENST00000320936 KRTAP20-1Q3LI63 56 aa7.18□□□□□ -1.26
CIRBP-201ENST00000320936 LCE1AQ5T7P2 110 aa7.17□□□□□ -1.26
CIRBP-201ENST00000320936 PSPHP1O15172 72 aa7.14□□□□□ -1.27
CIRBP-201ENST00000320936 PCP4P48539 62 aa7.14□□□□□ -1.27
CIRBP-201ENST00000320936 MIR22HGQ0VDD5 57 aa7.12□□□□□ -1.27
CIRBP-201ENST00000320936 Q1T7F1 81 aa7.11□□□□□ -1.27
CIRBP-201ENST00000320936 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
CIRBP-201ENST00000320936 SPRR2DP22532 72 aa7.05□□□□□ -1.28
CIRBP-201ENST00000320936 TNP1P09430 55 aa7.04□□□□□ -1.28
CIRBP-201ENST00000320936 KRTAP2-3P0C7H8 128 aa7.01□□□□□ -1.29
CIRBP-201ENST00000320936 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
CIRBP-201ENST00000320936 K7ERS5 55 aa6.99□□□□□ -1.29
CIRBP-201ENST00000320936 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
CIRBP-201ENST00000320936 A6NED7 52 aa6.94□□□□□ -1.3
CIRBP-201ENST00000320936 MT1EP04732 61 aa6.94□□□□□ -1.3
CIRBP-201ENST00000320936 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
CIRBP-201ENST00000320936 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
CIRBP-201ENST00000320936 LCE3AQ5TA76 89 aa6.9□□□□□ -1.3
CIRBP-201ENST00000320936 KRTAP19-3Q7Z4W3 81 aa6.83□□□□□ -1.32
CIRBP-201ENST00000320936 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
CIRBP-201ENST00000320936 KRTAP2-2Q9BYT5 123 aa6.8□□□□□ -1.32
CIRBP-201ENST00000320936 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms