RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
IFT88-201ENST00000319980 MYCBP2O75592 4640 aa4.07□□□□□ -1.76
IFT88-201ENST00000319980 SPINK7P58062 85 aa4.05□□□□□ -1.76
IFT88-201ENST00000319980 MT1HL1P0DM35 61 aa4.04□□□□□ -1.76
IFT88-201ENST00000319980 A6NED7 52 aa4.03□□□□□ -1.76
IFT88-201ENST00000319980 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
IFT88-201ENST00000319980 A8MU10 97 aa4.02□□□□□ -1.77
IFT88-201ENST00000319980 ATP11AUNQ6ZP68 121 aa4.02□□□□□ -1.77
IFT88-201ENST00000319980 XP32Q5T750 250 aa3.99□□□□□ -1.77
IFT88-201ENST00000319980 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
IFT88-201ENST00000319980 A0A1B0GU69 56 aa3.99□□□□□ -1.77
IFT88-201ENST00000319980 RPL37P61927 97 aaKnown RBP3.98□□□□□ -1.77
IFT88-201ENST00000319980 LCA10Q71F78 164 aa3.98□□□□□ -1.77
IFT88-201ENST00000319980 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
IFT88-201ENST00000319980 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
IFT88-201ENST00000319980 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
IFT88-201ENST00000319980 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
IFT88-201ENST00000319980 HERC1Q15751 4861 aa3.91□□□□□ -1.78
IFT88-201ENST00000319980 TPRXLQ17RH7 258 aa3.91□□□□□ -1.78
IFT88-201ENST00000319980 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
IFT88-201ENST00000319980 UQCR11O14957 56 aa3.89□□□□□ -1.79
IFT88-201ENST00000319980 LRP2P98164 4655 aa3.88□□□□□ -1.79
IFT88-201ENST00000319980 LPAP08519 4548 aa3.88□□□□□ -1.79
IFT88-201ENST00000319980 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
IFT88-201ENST00000319980 SPATA8Q6RVD6 105 aa3.86□□□□□ -1.79
IFT88-201ENST00000319980 S4R3F8 94 aa3.82□□□□□ -1.8
IFT88-201ENST00000319980 A6NN06 94 aa3.81□□□□□ -1.8
IFT88-201ENST00000319980 A0A1B0GU33 70 aa3.81□□□□□ -1.8
IFT88-201ENST00000319980 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
IFT88-201ENST00000319980 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
IFT88-201ENST00000319980 H0YAA0 97 aa3.79□□□□□ -1.8
IFT88-201ENST00000319980 LINC01554Q52M75 96 aa3.79□□□□□ -1.8
IFT88-201ENST00000319980 ADM2Q7Z4H4 148 aa3.78□□□□□ -1.8
IFT88-201ENST00000319980 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
IFT88-201ENST00000319980 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
IFT88-201ENST00000319980 CSAG1Q6PB30 78 aa3.72□□□□□ -1.81
IFT88-201ENST00000319980 P0C880 135 aa3.72□□□□□ -1.81
IFT88-201ENST00000319980 KRTAP4-1Q9BYQ7 146 aa3.72□□□□□ -1.81
IFT88-201ENST00000319980 K7ERS5 55 aa3.71□□□□□ -1.82
IFT88-201ENST00000319980 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
IFT88-201ENST00000319980 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
IFT88-201ENST00000319980 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
IFT88-201ENST00000319980 MUC2Q02817 5179 aa3.68□□□□□ -1.82
IFT88-201ENST00000319980 A0A0D9SG42 100 aa3.67□□□□□ -1.82
IFT88-201ENST00000319980 RNF213Q63HN8 5207 aa3.65□□□□□ -1.83
IFT88-201ENST00000319980 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
IFT88-201ENST00000319980 M0QZ58 72 aa3.58□□□□□ -1.84
IFT88-201ENST00000319980 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
IFT88-201ENST00000319980 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
IFT88-201ENST00000319980 R4GN34 69 aa3.56□□□□□ -1.84
IFT88-201ENST00000319980 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
IFT88-201ENST00000319980 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
IFT88-201ENST00000319980 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
IFT88-201ENST00000319980 ROMO1P60602 79 aa3.52□□□□□ -1.85
IFT88-201ENST00000319980 CRIPTQ9P021 101 aa3.52□□□□□ -1.85
IFT88-201ENST00000319980 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
IFT88-201ENST00000319980 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
IFT88-201ENST00000319980 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
IFT88-201ENST00000319980 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
IFT88-201ENST00000319980 M0R2T5 61 aa3.42□□□□□ -1.86
IFT88-201ENST00000319980 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
IFT88-201ENST00000319980 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.86
IFT88-201ENST00000319980 MT1HP80294 61 aa3.39□□□□□ -1.87
IFT88-201ENST00000319980 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
IFT88-201ENST00000319980 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
IFT88-201ENST00000319980 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
IFT88-201ENST00000319980 MT2AP02795 61 aa3.3□□□□□ -1.88
IFT88-201ENST00000319980 KRTAP19-1Q8IUB9 90 aa3.3□□□□□ -1.88
IFT88-201ENST00000319980 MT1FP04733 61 aa3.29□□□□□ -1.88
IFT88-201ENST00000319980 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
IFT88-201ENST00000319980 PLAC4Q8WY50 150 aa3.25□□□□□ -1.89
IFT88-201ENST00000319980 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
IFT88-201ENST00000319980 TNP1P09430 55 aa3.2□□□□□ -1.9
IFT88-201ENST00000319980 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
IFT88-201ENST00000319980 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
IFT88-201ENST00000319980 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
IFT88-201ENST00000319980 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
IFT88-201ENST00000319980 LCE5AQ5TCM9 118 aa3.16□□□□□ -1.9
IFT88-201ENST00000319980 KRTAP9-3Q9BYQ3 159 aa3.16□□□□□ -1.9
IFT88-201ENST00000319980 MT1BP07438 61 aa3.14□□□□□ -1.91
IFT88-201ENST00000319980 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
IFT88-201ENST00000319980 PRO2289Q9P1D8 64 aa3.13□□□□□ -1.91
IFT88-201ENST00000319980 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
IFT88-201ENST00000319980 MT1XP80297 61 aa3.08□□□□□ -1.92
IFT88-201ENST00000319980 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.05□□□□□ -1.92
IFT88-201ENST00000319980 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
IFT88-201ENST00000319980 USH2AO75445 5202 aa3.04□□□□□ -1.92
IFT88-201ENST00000319980 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
IFT88-201ENST00000319980 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
IFT88-201ENST00000319980 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
IFT88-201ENST00000319980 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
IFT88-201ENST00000319980 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
IFT88-201ENST00000319980 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
IFT88-201ENST00000319980 LCE4AQ5TA78 99 aa2.96□□□□□ -1.93
IFT88-201ENST00000319980 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
IFT88-201ENST00000319980 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
IFT88-201ENST00000319980 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
IFT88-201ENST00000319980 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
IFT88-201ENST00000319980 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
IFT88-201ENST00000319980 KMT2DO14686 5537 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms