RNA–Protein interactions for RNA: ENST00000317221.11

ZNF559-201, Transcript of zinc finger protein 559, humanhuman

TSL 2 BASIC

Gene ZNF559, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-201ENST00000317221 DMBT1Q9UGM3 2413 aaPredicted RBP3.11□□□□□ -1.91
ZNF559-201ENST00000317221 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
ZNF559-201ENST00000317221 VPS13BQ7Z7G8 4022 aa3.11□□□□□ -1.91
ZNF559-201ENST00000317221 APOBP04114 4563 aaKnown RBP3.1□□□□□ -1.91
ZNF559-201ENST00000317221 SMR3BP02814 79 aaPredicted RBP3.09□□□□□ -1.91
ZNF559-201ENST00000317221 COX6B2Q6YFQ2 88 aa3.09□□□□□ -1.91
ZNF559-201ENST00000317221 TPRXLQ17RH7 258 aa3.07□□□□□ -1.92
ZNF559-201ENST00000317221 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
ZNF559-201ENST00000317221 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
ZNF559-201ENST00000317221 KRTAP1-4P0C5Y4 121 aa3.07□□□□□ -1.92
ZNF559-201ENST00000317221 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
ZNF559-201ENST00000317221 HSPG2P98160 4391 aa3.05□□□□□ -1.92
ZNF559-201ENST00000317221 C20orf166-AS1Q96NR2 134 aa3.05□□□□□ -1.92
ZNF559-201ENST00000317221 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
ZNF559-201ENST00000317221 RYR1P21817 5038 aa3.03□□□□□ -1.92
ZNF559-201ENST00000317221 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
ZNF559-201ENST00000317221 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.92
ZNF559-201ENST00000317221 A0A0D9SG42 100 aa3.03□□□□□ -1.92
ZNF559-201ENST00000317221 C9orf92A6NGG3 77 aa3.03□□□□□ -1.92
ZNF559-201ENST00000317221 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
ZNF559-201ENST00000317221 KRTAP13-4Q3LI77 160 aa3□□□□□ -1.93
ZNF559-201ENST00000317221 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
ZNF559-201ENST00000317221 PKHD1L1Q86WI1 4243 aa2.97□□□□□ -1.93
ZNF559-201ENST00000317221 RPS29P62273 56 aaKnown RBP2.97□□□□□ -1.93
ZNF559-201ENST00000317221 KRTAP4-5Q9BYR2 181 aa2.97□□□□□ -1.93
ZNF559-201ENST00000317221 KRTAP10-4P60372 401 aaPredicted RBP2.96□□□□□ -1.94
ZNF559-201ENST00000317221 ABCA13Q86UQ4 5058 aa2.96□□□□□ -1.94
ZNF559-201ENST00000317221 LCE2AQ5TA79 106 aaPredicted RBP2.96□□□□□ -1.94
ZNF559-201ENST00000317221 S4R3F8 94 aa2.95□□□□□ -1.94
ZNF559-201ENST00000317221 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
ZNF559-201ENST00000317221 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
ZNF559-201ENST00000317221 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
ZNF559-201ENST00000317221 Q5VSD8 79 aa2.93□□□□□ -1.94
ZNF559-201ENST00000317221 HERC2O95714 4834 aa2.91□□□□□ -1.94
ZNF559-201ENST00000317221 FAT3Q8TDW7 4589 aa2.91□□□□□ -1.94
ZNF559-201ENST00000317221 PCLOQ9Y6V0 5065 aa2.91□□□□□ -1.94
ZNF559-201ENST00000317221 TNXBP22105 4242 aa2.9□□□□□ -1.95
ZNF559-201ENST00000317221 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
ZNF559-201ENST00000317221 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
ZNF559-201ENST00000317221 HERC1Q15751 4861 aa2.85□□□□□ -1.95
ZNF559-201ENST00000317221 KRTAP10-8P60410 259 aa2.84□□□□□ -1.95
ZNF559-201ENST00000317221 LPAP08519 4548 aa2.83□□□□□ -1.96
ZNF559-201ENST00000317221 MT1HL1P0DM35 61 aa2.83□□□□□ -1.96
ZNF559-201ENST00000317221 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
ZNF559-201ENST00000317221 PLAC4Q8WY50 150 aa2.82□□□□□ -1.96
ZNF559-201ENST00000317221 M0QZ58 72 aa2.81□□□□□ -1.96
ZNF559-201ENST00000317221 KRTAP9-8Q9BYQ0 159 aa2.81□□□□□ -1.96
ZNF559-201ENST00000317221 LRP2P98164 4655 aa2.79□□□□□ -1.96
ZNF559-201ENST00000317221 LCE2CQ5TA81 110 aa2.79□□□□□ -1.96
ZNF559-201ENST00000317221 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
ZNF559-201ENST00000317221 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
ZNF559-201ENST00000317221 KRTAP9-2Q9BYQ4 174 aa2.75□□□□□ -1.97
ZNF559-201ENST00000317221 J3QL48 77 aa2.74□□□□□ -1.97
ZNF559-201ENST00000317221 MUC2Q02817 5179 aa2.74□□□□□ -1.97
ZNF559-201ENST00000317221 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
ZNF559-201ENST00000317221 KRTAP9-6A0A140TA67 174 aa2.74□□□□□ -1.97
ZNF559-201ENST00000317221 LORP23490 312 aaPredicted RBP2.74□□□□□ -1.97
ZNF559-201ENST00000317221 R4GN34 69 aa2.71□□□□□ -1.98
ZNF559-201ENST00000317221 KRTAP4-7Q9BYR0 210 aa2.71□□□□□ -1.98
ZNF559-201ENST00000317221 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
ZNF559-201ENST00000317221 UBR4Q5T4S7 5183 aa2.7□□□□□ -1.98
ZNF559-201ENST00000317221 RNF213Q63HN8 5207 aa2.7□□□□□ -1.98
ZNF559-201ENST00000317221 LCE3BQ5TA77 95 aa2.66□□□□□ -1.98
ZNF559-201ENST00000317221 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
ZNF559-201ENST00000317221 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
ZNF559-201ENST00000317221 KRTAP4-1Q9BYQ7 146 aa2.62□□□□□ -1.99
ZNF559-201ENST00000317221 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
ZNF559-201ENST00000317221 KRTAP9-4Q9BYQ2 154 aa2.61□□□□□ -1.99
ZNF559-201ENST00000317221 CAMK2N1Q7Z7J9 78 aa2.6□□□□□ -1.99
ZNF559-201ENST00000317221 MUC17Q685J3 4493 aa2.59□□□□□ -1.99
ZNF559-201ENST00000317221 SEC61BP60468 96 aaKnown RBP2.59□□□□□ -2
ZNF559-201ENST00000317221 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
ZNF559-201ENST00000317221 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
ZNF559-201ENST00000317221 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
ZNF559-201ENST00000317221 TNP1P09430 55 aa2.52□□□□□ -2.01
ZNF559-201ENST00000317221 KRTAP4-9Q9BYQ8 210 aa2.51□□□□□ -2.01
ZNF559-201ENST00000317221 KRTAP23-1A1A580 65 aa2.5□□□□□ -2.01
ZNF559-201ENST00000317221 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
ZNF559-201ENST00000317221 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
ZNF559-201ENST00000317221 KRTAP19-2Q3LHN2 52 aa2.48□□□□□ -2.01
ZNF559-201ENST00000317221 KRTAP19-1Q8IUB9 90 aa2.48□□□□□ -2.01
ZNF559-201ENST00000317221 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
ZNF559-201ENST00000317221 INE1O15225 51 aa2.42□□□□□ -2.02
ZNF559-201ENST00000317221 MT1HP80294 61 aa2.38□□□□□ -2.03
ZNF559-201ENST00000317221 M0R2T5 61 aa2.37□□□□□ -2.03
ZNF559-201ENST00000317221 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
ZNF559-201ENST00000317221 LCE3AQ5TA76 89 aa2.36□□□□□ -2.03
ZNF559-201ENST00000317221 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.04
ZNF559-201ENST00000317221 CRCT1Q9UGL9 99 aa2.33□□□□□ -2.04
ZNF559-201ENST00000317221 USH2AO75445 5202 aa2.33□□□□□ -2.04
ZNF559-201ENST00000317221 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
ZNF559-201ENST00000317221 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
ZNF559-201ENST00000317221 MT1FP04733 61 aa2.3□□□□□ -2.04
ZNF559-201ENST00000317221 MT2AP02795 61 aa2.29□□□□□ -2.04
ZNF559-201ENST00000317221 SPRR2GQ9BYE4 73 aa2.29□□□□□ -2.04
ZNF559-201ENST00000317221 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.04
ZNF559-201ENST00000317221 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
ZNF559-201ENST00000317221 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
ZNF559-201ENST00000317221 KRTAP10-12P60413 245 aa2.24□□□□□ -2.05
ZNF559-201ENST00000317221 KRTAP9-3Q9BYQ3 159 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms