RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
HNF4A-202ENST00000316673 MPLKIPQ8TAP9 179 aa7.81□□□□□ -1.16
HNF4A-202ENST00000316673 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
HNF4A-202ENST00000316673 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
HNF4A-202ENST00000316673 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
HNF4A-202ENST00000316673 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
HNF4A-202ENST00000316673 S4R3F8 94 aa7.7□□□□□ -1.18
HNF4A-202ENST00000316673 V9GYY9 64 aa7.7□□□□□ -1.18
HNF4A-202ENST00000316673 MT1HP80294 61 aa7.68□□□□□ -1.18
HNF4A-202ENST00000316673 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
HNF4A-202ENST00000316673 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.19
HNF4A-202ENST00000316673 M0R2T5 61 aa7.63□□□□□ -1.19
HNF4A-202ENST00000316673 CRCT1Q9UGL9 99 aa7.63□□□□□ -1.19
HNF4A-202ENST00000316673 Q1T7F1 81 aa7.59□□□□□ -1.19
HNF4A-202ENST00000316673 LCA10Q71F78 164 aa7.59□□□□□ -1.19
HNF4A-202ENST00000316673 FSIP2Q5CZC0 6907 aa7.57□□□□□ -1.2
HNF4A-202ENST00000316673 SEC61GP60059 68 aa7.57□□□□□ -1.2
HNF4A-202ENST00000316673 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
HNF4A-202ENST00000316673 PRR15LQ9BU68 103 aa7.56□□□□□ -1.2
HNF4A-202ENST00000316673 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
HNF4A-202ENST00000316673 A0A1B0GU69 56 aa7.49□□□□□ -1.21
HNF4A-202ENST00000316673 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
HNF4A-202ENST00000316673 KRTAP10-6P60371 365 aaPredicted RBP7.48□□□□□ -1.21
HNF4A-202ENST00000316673 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
HNF4A-202ENST00000316673 H0YAA0 97 aa7.39□□□□□ -1.23
HNF4A-202ENST00000316673 PSPHP1O15172 72 aa7.39□□□□□ -1.23
HNF4A-202ENST00000316673 SVIPQ8NHG7 77 aa7.34□□□□□ -1.23
HNF4A-202ENST00000316673 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
HNF4A-202ENST00000316673 Q5VV11 94 aa7.31□□□□□ -1.24
HNF4A-202ENST00000316673 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
HNF4A-202ENST00000316673 UQCR11O14957 56 aa7.28□□□□□ -1.24
HNF4A-202ENST00000316673 A0A1B0GU33 70 aa7.26□□□□□ -1.25
HNF4A-202ENST00000316673 A6NED7 52 aa7.26□□□□□ -1.25
HNF4A-202ENST00000316673 MT2AP02795 61 aa7.26□□□□□ -1.25
HNF4A-202ENST00000316673 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
HNF4A-202ENST00000316673 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
HNF4A-202ENST00000316673 MT1FP04733 61 aa7.19□□□□□ -1.26
HNF4A-202ENST00000316673 M0QZ58 72 aa7.17□□□□□ -1.26
HNF4A-202ENST00000316673 P0C880 135 aa7.17□□□□□ -1.26
HNF4A-202ENST00000316673 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
HNF4A-202ENST00000316673 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.27
HNF4A-202ENST00000316673 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
HNF4A-202ENST00000316673 R4GN34 69 aa7.12□□□□□ -1.27
HNF4A-202ENST00000316673 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
HNF4A-202ENST00000316673 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
HNF4A-202ENST00000316673 BRK1Q8WUW1 75 aa7.11□□□□□ -1.27
HNF4A-202ENST00000316673 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
HNF4A-202ENST00000316673 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
HNF4A-202ENST00000316673 K7ERS5 55 aa6.99□□□□□ -1.29
HNF4A-202ENST00000316673 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
HNF4A-202ENST00000316673 LCE2BO14633 110 aa6.94□□□□□ -1.3
HNF4A-202ENST00000316673 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
HNF4A-202ENST00000316673 USH2AO75445 5202 aa6.94□□□□□ -1.3
HNF4A-202ENST00000316673 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
HNF4A-202ENST00000316673 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
HNF4A-202ENST00000316673 A0A0D9SG42 100 aa6.92□□□□□ -1.3
HNF4A-202ENST00000316673 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
HNF4A-202ENST00000316673 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
HNF4A-202ENST00000316673 A8MU10 97 aa6.89□□□□□ -1.31
HNF4A-202ENST00000316673 A6NN06 94 aa6.88□□□□□ -1.31
HNF4A-202ENST00000316673 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
HNF4A-202ENST00000316673 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
HNF4A-202ENST00000316673 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
HNF4A-202ENST00000316673 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
HNF4A-202ENST00000316673 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
HNF4A-202ENST00000316673 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
HNF4A-202ENST00000316673 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
HNF4A-202ENST00000316673 MT1BP07438 61 aa6.71□□□□□ -1.34
HNF4A-202ENST00000316673 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
HNF4A-202ENST00000316673 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
HNF4A-202ENST00000316673 CAMK2N1Q7Z7J9 78 aa6.68□□□□□ -1.34
HNF4A-202ENST00000316673 SYNE2Q8WXH0 6885 aaKnown RBP6.68□□□□□ -1.34
HNF4A-202ENST00000316673 ROMO1P60602 79 aa6.55□□□□□ -1.36
HNF4A-202ENST00000316673 KRTAP6-3Q3LI67 103 aa6.53□□□□□ -1.36
HNF4A-202ENST00000316673 KRTAP10-5P60370 271 aa6.51□□□□□ -1.37
HNF4A-202ENST00000316673 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
HNF4A-202ENST00000316673 KTN1-AS1Q86SY8 53 aa6.44□□□□□ -1.38
HNF4A-202ENST00000316673 MT1XP80297 61 aa6.4□□□□□ -1.39
HNF4A-202ENST00000316673 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
HNF4A-202ENST00000316673 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
HNF4A-202ENST00000316673 TNP1P09430 55 aa6.35□□□□□ -1.39
HNF4A-202ENST00000316673 NEBP20929 6669 aa6.35□□□□□ -1.39
HNF4A-202ENST00000316673 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
HNF4A-202ENST00000316673 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
HNF4A-202ENST00000316673 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
HNF4A-202ENST00000316673 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
HNF4A-202ENST00000316673 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
HNF4A-202ENST00000316673 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
HNF4A-202ENST00000316673 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
HNF4A-202ENST00000316673 KRTAP5-9P26371 169 aa6.06□□□□□ -1.44
HNF4A-202ENST00000316673 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
HNF4A-202ENST00000316673 KMT2DO14686 5537 aa6.01□□□□□ -1.45
HNF4A-202ENST00000316673 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
HNF4A-202ENST00000316673 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
HNF4A-202ENST00000316673 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
HNF4A-202ENST00000316673 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
HNF4A-202ENST00000316673 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
HNF4A-202ENST00000316673 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
HNF4A-202ENST00000316673 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
HNF4A-202ENST00000316673 SPRR2EP22531 72 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms