RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 ATP5EP56381 51 aaPredicted RBP9.1□□□□□ -0.95
CDK4-202ENST00000312990 SERP1Q9Y6X1 66 aa9.1□□□□□ -0.95
CDK4-202ENST00000312990 S4R3F8 94 aa9.1□□□□□ -0.95
CDK4-202ENST00000312990 LCA10Q71F78 164 aa9.1□□□□□ -0.95
CDK4-202ENST00000312990 M0R2T5 61 aa9.07□□□□□ -0.96
CDK4-202ENST00000312990 ACYP2P14621 99 aa9.07□□□□□ -0.96
CDK4-202ENST00000312990 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
CDK4-202ENST00000312990 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
CDK4-202ENST00000312990 CSAG1Q6PB30 78 aa8.94□□□□□ -0.98
CDK4-202ENST00000312990 SMIM26A0A096LP01 95 aa8.93□□□□□ -0.98
CDK4-202ENST00000312990 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
CDK4-202ENST00000312990 COA5Q86WW8 74 aa8.93□□□□□ -0.98
CDK4-202ENST00000312990 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
CDK4-202ENST00000312990 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
CDK4-202ENST00000312990 MT2AP02795 61 aa8.78□□□□□ -1
CDK4-202ENST00000312990 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
CDK4-202ENST00000312990 MT1FP04733 61 aa8.73□□□□□ -1.01
CDK4-202ENST00000312990 H0YAA0 97 aa8.72□□□□□ -1.01
CDK4-202ENST00000312990 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
CDK4-202ENST00000312990 Q1T7F1 81 aa8.65□□□□□ -1.02
CDK4-202ENST00000312990 ADM2Q7Z4H4 148 aa8.65□□□□□ -1.02
CDK4-202ENST00000312990 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
CDK4-202ENST00000312990 P0C880 135 aa8.59□□□□□ -1.03
CDK4-202ENST00000312990 PRO0628Q9UI54 55 aa8.56□□□□□ -1.04
CDK4-202ENST00000312990 KRTAP9-3Q9BYQ3 159 aa8.55□□□□□ -1.04
CDK4-202ENST00000312990 V9GYY9 64 aa8.53□□□□□ -1.04
CDK4-202ENST00000312990 LINC01558Q9Y6Z2 57 aa8.46□□□□□ -1.06
CDK4-202ENST00000312990 SEC61GP60059 68 aa8.45□□□□□ -1.06
CDK4-202ENST00000312990 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
CDK4-202ENST00000312990 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
CDK4-202ENST00000312990 BRK1Q8WUW1 75 aa8.44□□□□□ -1.06
CDK4-202ENST00000312990 A0A1B0GU69 56 aa8.43□□□□□ -1.06
CDK4-202ENST00000312990 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
CDK4-202ENST00000312990 PSPHP1O15172 72 aa8.42□□□□□ -1.06
CDK4-202ENST00000312990 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
CDK4-202ENST00000312990 Q5VV11 94 aa8.4□□□□□ -1.06
CDK4-202ENST00000312990 LCE2BO14633 110 aa8.38□□□□□ -1.07
CDK4-202ENST00000312990 R4GN34 69 aa8.37□□□□□ -1.07
CDK4-202ENST00000312990 USH2AO75445 5202 aa8.37□□□□□ -1.07
CDK4-202ENST00000312990 M0QZ58 72 aa8.34□□□□□ -1.07
CDK4-202ENST00000312990 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
CDK4-202ENST00000312990 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
CDK4-202ENST00000312990 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
CDK4-202ENST00000312990 A0A1B0GU33 70 aa8.29□□□□□ -1.08
CDK4-202ENST00000312990 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
CDK4-202ENST00000312990 KRTAP19-8Q3LI54 63 aa8.24□□□□□ -1.09
CDK4-202ENST00000312990 SPATA8Q6RVD6 105 aa8.21□□□□□ -1.09
CDK4-202ENST00000312990 LINC01554Q52M75 96 aa8.19□□□□□ -1.1
CDK4-202ENST00000312990 SSPOA2VEC9 5147 aa8.19□□□□□ -1.1
CDK4-202ENST00000312990 MT1BP07438 61 aa8.18□□□□□ -1.1
CDK4-202ENST00000312990 A8MU10 97 aa8.17□□□□□ -1.1
CDK4-202ENST00000312990 A6NED7 52 aa8.14□□□□□ -1.11
CDK4-202ENST00000312990 CDC42SE1Q9NRR8 79 aa8.13□□□□□ -1.11
CDK4-202ENST00000312990 UQCR11O14957 56 aa8.1□□□□□ -1.11
CDK4-202ENST00000312990 A0A0D9SG42 100 aa8.07□□□□□ -1.12
CDK4-202ENST00000312990 A6NN06 94 aa8.05□□□□□ -1.12
CDK4-202ENST00000312990 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
CDK4-202ENST00000312990 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
CDK4-202ENST00000312990 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
CDK4-202ENST00000312990 CRCT1Q9UGL9 99 aa7.95□□□□□ -1.14
CDK4-202ENST00000312990 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
CDK4-202ENST00000312990 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
CDK4-202ENST00000312990 KRTAP12-2P59991 146 aa7.91□□□□□ -1.14
CDK4-202ENST00000312990 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
CDK4-202ENST00000312990 FCGBPQ9Y6R7 5405 aaPredicted RBP7.86□□□□□ -1.15
CDK4-202ENST00000312990 KTN1-AS1Q86SY8 53 aa7.86□□□□□ -1.15
CDK4-202ENST00000312990 MT1XP80297 61 aa7.84□□□□□ -1.15
CDK4-202ENST00000312990 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
CDK4-202ENST00000312990 KRTAP9-6A0A140TA67 174 aa7.8□□□□□ -1.16
CDK4-202ENST00000312990 CAMK2N1Q7Z7J9 78 aa7.78□□□□□ -1.16
CDK4-202ENST00000312990 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
CDK4-202ENST00000312990 K7ERS5 55 aa7.64□□□□□ -1.19
CDK4-202ENST00000312990 MACF1Q9UPN3 7388 aaKnown RBP7.57□□□□□ -1.2
CDK4-202ENST00000312990 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
CDK4-202ENST00000312990 KRTAP10-7P60409 375 aaPredicted RBP7.51□□□□□ -1.21
CDK4-202ENST00000312990 KMT2DO14686 5537 aa7.5□□□□□ -1.21
CDK4-202ENST00000312990 PRAC1Q96KF2 57 aa7.47□□□□□ -1.21
CDK4-202ENST00000312990 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
CDK4-202ENST00000312990 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
CDK4-202ENST00000312990 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
CDK4-202ENST00000312990 TNP1P09430 55 aa7.34□□□□□ -1.23
CDK4-202ENST00000312990 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
CDK4-202ENST00000312990 ROMO1P60602 79 aa7.31□□□□□ -1.24
CDK4-202ENST00000312990 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
CDK4-202ENST00000312990 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
CDK4-202ENST00000312990 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
CDK4-202ENST00000312990 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
CDK4-202ENST00000312990 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
CDK4-202ENST00000312990 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
CDK4-202ENST00000312990 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
CDK4-202ENST00000312990 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
CDK4-202ENST00000312990 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
CDK4-202ENST00000312990 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
CDK4-202ENST00000312990 KRTAP19-7Q3SYF9 63 aa7□□□□□ -1.29
CDK4-202ENST00000312990 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
CDK4-202ENST00000312990 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
CDK4-202ENST00000312990 PP632Q6XCG6 107 aa6.9□□□□□ -1.31
CDK4-202ENST00000312990 MT1EP04732 61 aa6.89□□□□□ -1.31
CDK4-202ENST00000312990 KRTAP12-3P60328 96 aa6.85□□□□□ -1.31
CDK4-202ENST00000312990 NEBP20929 6669 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms