RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 HRES1P13985 223 aa8.91□□□□□ -0.98
SWSAP1-201ENST00000312423 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
SWSAP1-201ENST00000312423 BRK1Q8WUW1 75 aa8.91□□□□□ -0.98
SWSAP1-201ENST00000312423 PSPHP1O15172 72 aa8.88□□□□□ -0.99
SWSAP1-201ENST00000312423 MT1HP80294 61 aa8.88□□□□□ -0.99
SWSAP1-201ENST00000312423 IGKV2D-30A0A075B6S6 120 aa8.88□□□□□ -0.99
SWSAP1-201ENST00000312423 A8MUN3 132 aa8.88□□□□□ -0.99
SWSAP1-201ENST00000312423 IGKV2-30P06310 120 aa8.88□□□□□ -0.99
SWSAP1-201ENST00000312423 Q5VV11 94 aa8.87□□□□□ -0.99
SWSAP1-201ENST00000312423 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
SWSAP1-201ENST00000312423 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
SWSAP1-201ENST00000312423 C7orf65Q6ZTY9 151 aa8.84□□□□□ -0.99
SWSAP1-201ENST00000312423 M0R2T5 61 aa8.83□□□□□ -1
SWSAP1-201ENST00000312423 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
SWSAP1-201ENST00000312423 DMAC1Q96GE9 116 aa8.78□□□□□ -1
SWSAP1-201ENST00000312423 PRR15LQ9BU68 103 aa8.78□□□□□ -1
SWSAP1-201ENST00000312423 ACYP2P14621 99 aa8.75□□□□□ -1.01
SWSAP1-201ENST00000312423 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.02
SWSAP1-201ENST00000312423 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
SWSAP1-201ENST00000312423 FLGP20930 4061 aaPredicted RBP8.67□□□□□ -1.02
SWSAP1-201ENST00000312423 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
SWSAP1-201ENST00000312423 A8MU10 97 aa8.62□□□□□ -1.03
SWSAP1-201ENST00000312423 LORP23490 312 aaPredicted RBP8.62□□□□□ -1.03
SWSAP1-201ENST00000312423 LCA10Q71F78 164 aa8.61□□□□□ -1.03
SWSAP1-201ENST00000312423 H1FX-AS1Q4G0G2 97 aa8.6□□□□□ -1.03
SWSAP1-201ENST00000312423 A6NED7 52 aa8.59□□□□□ -1.03
SWSAP1-201ENST00000312423 CDC42SE1Q9NRR8 79 aa8.58□□□□□ -1.04
SWSAP1-201ENST00000312423 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
SWSAP1-201ENST00000312423 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
SWSAP1-201ENST00000312423 KRTAP9-8Q9BYQ0 159 aa8.43□□□□□ -1.06
SWSAP1-201ENST00000312423 A0A1B0GU69 56 aa8.43□□□□□ -1.06
SWSAP1-201ENST00000312423 A0A0A0MQY5 61 aa8.42□□□□□ -1.06
SWSAP1-201ENST00000312423 S4R3F8 94 aa8.42□□□□□ -1.06
SWSAP1-201ENST00000312423 A6NN06 94 aa8.4□□□□□ -1.07
SWSAP1-201ENST00000312423 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.07
SWSAP1-201ENST00000312423 MT2AP02795 61 aa8.38□□□□□ -1.07
SWSAP1-201ENST00000312423 SPATA8Q6RVD6 105 aa8.34□□□□□ -1.07
SWSAP1-201ENST00000312423 KRTAP10-10P60014 251 aa8.34□□□□□ -1.08
SWSAP1-201ENST00000312423 MT1FP04733 61 aa8.31□□□□□ -1.08
SWSAP1-201ENST00000312423 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
SWSAP1-201ENST00000312423 UQCR11O14957 56 aa8.29□□□□□ -1.08
SWSAP1-201ENST00000312423 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
SWSAP1-201ENST00000312423 LINC01554Q52M75 96 aa8.2□□□□□ -1.1
SWSAP1-201ENST00000312423 KRTAP9-3Q9BYQ3 159 aa8.16□□□□□ -1.1
SWSAP1-201ENST00000312423 KRTAP9-6A0A140TA67 174 aa8.05□□□□□ -1.12
SWSAP1-201ENST00000312423 LCE2BO14633 110 aa8.05□□□□□ -1.12
SWSAP1-201ENST00000312423 H0YAA0 97 aa8.05□□□□□ -1.12
SWSAP1-201ENST00000312423 CRCT1Q9UGL9 99 aa8.05□□□□□ -1.12
SWSAP1-201ENST00000312423 A0A1B0GU33 70 aa8.03□□□□□ -1.12
SWSAP1-201ENST00000312423 FSIP2Q5CZC0 6907 aa8□□□□□ -1.13
SWSAP1-201ENST00000312423 ADM2Q7Z4H4 148 aa7.96□□□□□ -1.13
SWSAP1-201ENST00000312423 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
SWSAP1-201ENST00000312423 USH2AO75445 5202 aa7.89□□□□□ -1.15
SWSAP1-201ENST00000312423 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
SWSAP1-201ENST00000312423 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
SWSAP1-201ENST00000312423 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
SWSAP1-201ENST00000312423 P0C880 135 aa7.81□□□□□ -1.16
SWSAP1-201ENST00000312423 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
SWSAP1-201ENST00000312423 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
SWSAP1-201ENST00000312423 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
SWSAP1-201ENST00000312423 R4GN34 69 aa7.74□□□□□ -1.17
SWSAP1-201ENST00000312423 K7ERS5 55 aa7.71□□□□□ -1.18
SWSAP1-201ENST00000312423 MT1BP07438 61 aa7.71□□□□□ -1.18
SWSAP1-201ENST00000312423 M0QZ58 72 aa7.7□□□□□ -1.18
SWSAP1-201ENST00000312423 KRTAP19-6Q3LI70 58 aa7.7□□□□□ -1.18
SWSAP1-201ENST00000312423 ROMO1P60602 79 aa7.58□□□□□ -1.2
SWSAP1-201ENST00000312423 KRTAP25-1Q3LHN0 102 aa7.57□□□□□ -1.2
SWSAP1-201ENST00000312423 A0A0D9SG42 100 aa7.55□□□□□ -1.2
SWSAP1-201ENST00000312423 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
SWSAP1-201ENST00000312423 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
SWSAP1-201ENST00000312423 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
SWSAP1-201ENST00000312423 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
SWSAP1-201ENST00000312423 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
SWSAP1-201ENST00000312423 KRTAP12-2P59991 146 aa7.46□□□□□ -1.22
SWSAP1-201ENST00000312423 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
SWSAP1-201ENST00000312423 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
SWSAP1-201ENST00000312423 MT1XP80297 61 aa7.32□□□□□ -1.24
SWSAP1-201ENST00000312423 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
SWSAP1-201ENST00000312423 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
SWSAP1-201ENST00000312423 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
SWSAP1-201ENST00000312423 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
SWSAP1-201ENST00000312423 C10orf95Q9H7T3 257 aa7.18□□□□□ -1.26
SWSAP1-201ENST00000312423 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
SWSAP1-201ENST00000312423 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
SWSAP1-201ENST00000312423 NDUFAF8A1L188 74 aa7.01□□□□□ -1.29
SWSAP1-201ENST00000312423 KRTAP10-7P60409 375 aaPredicted RBP7.01□□□□□ -1.29
SWSAP1-201ENST00000312423 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
SWSAP1-201ENST00000312423 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
SWSAP1-201ENST00000312423 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
SWSAP1-201ENST00000312423 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.3
SWSAP1-201ENST00000312423 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
SWSAP1-201ENST00000312423 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
SWSAP1-201ENST00000312423 KMT2DO14686 5537 aa6.87□□□□□ -1.31
SWSAP1-201ENST00000312423 SPRR2FQ96RM1 72 aa6.84□□□□□ -1.31
SWSAP1-201ENST00000312423 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.32
SWSAP1-201ENST00000312423 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.32
SWSAP1-201ENST00000312423 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
SWSAP1-201ENST00000312423 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.32
SWSAP1-201ENST00000312423 TNP1P09430 55 aa6.7□□□□□ -1.34
SWSAP1-201ENST00000312423 MUC12Q9UKN1 5478 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms