RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 IMUPQ9GZP8 106 aa4.45□□□□□ -1.7
PDE4D-201ENST00000309641 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
PDE4D-201ENST00000309641 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
PDE4D-201ENST00000309641 LOC101927531A0A1B0GV80 90 aa4.43□□□□□ -1.7
PDE4D-201ENST00000309641 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
PDE4D-201ENST00000309641 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
PDE4D-201ENST00000309641 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
PDE4D-201ENST00000309641 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
PDE4D-201ENST00000309641 LINC00208Q96KT6 92 aa4.41□□□□□ -1.7
PDE4D-201ENST00000309641 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
PDE4D-201ENST00000309641 ATOX1O00244 68 aa4.4□□□□□ -1.7
PDE4D-201ENST00000309641 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
PDE4D-201ENST00000309641 KLKP1Q107X0 134 aa4.39□□□□□ -1.71
PDE4D-201ENST00000309641 MP68P56378 58 aa4.37□□□□□ -1.71
PDE4D-201ENST00000309641 MT2AP02795 61 aa4.36□□□□□ -1.71
PDE4D-201ENST00000309641 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
PDE4D-201ENST00000309641 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
PDE4D-201ENST00000309641 MT1FP04733 61 aa4.34□□□□□ -1.71
PDE4D-201ENST00000309641 LCA10Q71F78 164 aa4.33□□□□□ -1.72
PDE4D-201ENST00000309641 H3BPC8 53 aa4.32□□□□□ -1.72
PDE4D-201ENST00000309641 S4R3F8 94 aa4.32□□□□□ -1.72
PDE4D-201ENST00000309641 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
PDE4D-201ENST00000309641 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
PDE4D-201ENST00000309641 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
PDE4D-201ENST00000309641 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
PDE4D-201ENST00000309641 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
PDE4D-201ENST00000309641 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
PDE4D-201ENST00000309641 CSAG1Q6PB30 78 aa4.25□□□□□ -1.73
PDE4D-201ENST00000309641 C20orf197Q8N268 126 aa4.25□□□□□ -1.73
PDE4D-201ENST00000309641 A8MUN3 132 aa4.24□□□□□ -1.73
PDE4D-201ENST00000309641 DMAC1Q96GE9 116 aa4.23□□□□□ -1.73
PDE4D-201ENST00000309641 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
PDE4D-201ENST00000309641 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
PDE4D-201ENST00000309641 NDUFC1O43677 76 aa4.2□□□□□ -1.74
PDE4D-201ENST00000309641 COX7CP15954 63 aa4.19□□□□□ -1.74
PDE4D-201ENST00000309641 USH2AO75445 5202 aa4.19□□□□□ -1.74
PDE4D-201ENST00000309641 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
PDE4D-201ENST00000309641 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
PDE4D-201ENST00000309641 ACYP2P14621 99 aa4.14□□□□□ -1.75
PDE4D-201ENST00000309641 CCDC179H3BU77 68 aa4.13□□□□□ -1.75
PDE4D-201ENST00000309641 SPANXA2-OT1Q8N9U9 137 aa4.13□□□□□ -1.75
PDE4D-201ENST00000309641 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
PDE4D-201ENST00000309641 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
PDE4D-201ENST00000309641 H7BZZ5 65 aa4.11□□□□□ -1.75
PDE4D-201ENST00000309641 ADM2Q7Z4H4 148 aa4.11□□□□□ -1.75
PDE4D-201ENST00000309641 H0YAA0 97 aa4.1□□□□□ -1.75
PDE4D-201ENST00000309641 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
PDE4D-201ENST00000309641 P0C880 135 aa4.07□□□□□ -1.76
PDE4D-201ENST00000309641 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
PDE4D-201ENST00000309641 COA5Q86WW8 74 aa4.04□□□□□ -1.76
PDE4D-201ENST00000309641 MT1BP07438 61 aa4.04□□□□□ -1.76
PDE4D-201ENST00000309641 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
PDE4D-201ENST00000309641 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
PDE4D-201ENST00000309641 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
PDE4D-201ENST00000309641 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
PDE4D-201ENST00000309641 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
PDE4D-201ENST00000309641 Q5VV11 94 aa3.99□□□□□ -1.77
PDE4D-201ENST00000309641 TMEM258P61165 79 aa3.98□□□□□ -1.77
PDE4D-201ENST00000309641 R4GN34 69 aa3.97□□□□□ -1.77
PDE4D-201ENST00000309641 M0QZ58 72 aa3.96□□□□□ -1.78
PDE4D-201ENST00000309641 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
PDE4D-201ENST00000309641 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
PDE4D-201ENST00000309641 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
PDE4D-201ENST00000309641 SMIM26A0A096LP01 95 aa3.91□□□□□ -1.78
PDE4D-201ENST00000309641 PSPHP1O15172 72 aa3.91□□□□□ -1.78
PDE4D-201ENST00000309641 KRTAP13-4Q3LI77 160 aa3.9□□□□□ -1.79
PDE4D-201ENST00000309641 ATP5EP56381 51 aaPredicted RBP3.89□□□□□ -1.79
PDE4D-201ENST00000309641 A6NN06 94 aa3.87□□□□□ -1.79
PDE4D-201ENST00000309641 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
PDE4D-201ENST00000309641 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
PDE4D-201ENST00000309641 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
PDE4D-201ENST00000309641 MT1XP80297 61 aa3.83□□□□□ -1.8
PDE4D-201ENST00000309641 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
PDE4D-201ENST00000309641 A0A1B0GU69 56 aa3.8□□□□□ -1.8
PDE4D-201ENST00000309641 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PDE4D-201ENST00000309641 A0A1B0GU33 70 aa3.8□□□□□ -1.8
PDE4D-201ENST00000309641 A0A0D9SG42 100 aa3.77□□□□□ -1.81
PDE4D-201ENST00000309641 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
PDE4D-201ENST00000309641 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
PDE4D-201ENST00000309641 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
PDE4D-201ENST00000309641 LINC01558Q9Y6Z2 57 aa3.76□□□□□ -1.81
PDE4D-201ENST00000309641 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
PDE4D-201ENST00000309641 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
PDE4D-201ENST00000309641 A8MU10 97 aa3.72□□□□□ -1.81
PDE4D-201ENST00000309641 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.81
PDE4D-201ENST00000309641 KMT2DO14686 5537 aa3.71□□□□□ -1.82
PDE4D-201ENST00000309641 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
PDE4D-201ENST00000309641 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
PDE4D-201ENST00000309641 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
PDE4D-201ENST00000309641 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
PDE4D-201ENST00000309641 SPINT4Q6UDR6 99 aa3.68□□□□□ -1.82
PDE4D-201ENST00000309641 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-201ENST00000309641 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
PDE4D-201ENST00000309641 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.82
PDE4D-201ENST00000309641 Q1T7F1 81 aa3.64□□□□□ -1.83
PDE4D-201ENST00000309641 UQCR11O14957 56 aa3.62□□□□□ -1.83
PDE4D-201ENST00000309641 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
PDE4D-201ENST00000309641 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
PDE4D-201ENST00000309641 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
PDE4D-201ENST00000309641 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms