RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 LPAP08519 4548 aa3.74□□□□□ -1.81
PTCD2-201ENST00000308077 C1orf64Q8NEQ6 169 aa3.73□□□□□ -1.81
PTCD2-201ENST00000308077 H3BPC8 53 aa3.73□□□□□ -1.81
PTCD2-201ENST00000308077 FAM236DA0A1B0GTK5 79 aa3.72□□□□□ -1.81
PTCD2-201ENST00000308077 FAM236CP0DP71 79 aa3.72□□□□□ -1.81
PTCD2-201ENST00000308077 RPL37P61927 97 aaKnown RBP3.72□□□□□ -1.81
PTCD2-201ENST00000308077 NDUFC1O43677 76 aa3.7□□□□□ -1.82
PTCD2-201ENST00000308077 LOC101927531A0A1B0GV80 90 aa3.7□□□□□ -1.82
PTCD2-201ENST00000308077 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
PTCD2-201ENST00000308077 PCOTHQ58A44 107 aa3.69□□□□□ -1.82
PTCD2-201ENST00000308077 CYP4F30PQ9H0H9 118 aa3.69□□□□□ -1.82
PTCD2-201ENST00000308077 IGKV2D-30A0A075B6S6 120 aa3.68□□□□□ -1.82
PTCD2-201ENST00000308077 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
PTCD2-201ENST00000308077 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
PTCD2-201ENST00000308077 ATP11AUNQ6ZP68 121 aa3.67□□□□□ -1.82
PTCD2-201ENST00000308077 USH2AO75445 5202 aa3.66□□□□□ -1.82
PTCD2-201ENST00000308077 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.82
PTCD2-201ENST00000308077 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.82
PTCD2-201ENST00000308077 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.82
PTCD2-201ENST00000308077 RPS28P62857 69 aaKnown RBP3.65□□□□□ -1.83
PTCD2-201ENST00000308077 SPINK7P58062 85 aa3.64□□□□□ -1.83
PTCD2-201ENST00000308077 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
PTCD2-201ENST00000308077 HRES1P13985 223 aa3.63□□□□□ -1.83
PTCD2-201ENST00000308077 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
PTCD2-201ENST00000308077 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
PTCD2-201ENST00000308077 SPANXA2-OT1Q8N9U9 137 aa3.63□□□□□ -1.83
PTCD2-201ENST00000308077 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
PTCD2-201ENST00000308077 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
PTCD2-201ENST00000308077 C4orf26Q17RF5 130 aa3.59□□□□□ -1.84
PTCD2-201ENST00000308077 KRTAP4-1Q9BYQ7 146 aa3.58□□□□□ -1.84
PTCD2-201ENST00000308077 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
PTCD2-201ENST00000308077 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
PTCD2-201ENST00000308077 DMAC1Q96GE9 116 aa3.57□□□□□ -1.84
PTCD2-201ENST00000308077 COA5Q86WW8 74 aa3.56□□□□□ -1.84
PTCD2-201ENST00000308077 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
PTCD2-201ENST00000308077 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
PTCD2-201ENST00000308077 MPLKIPQ8TAP9 179 aa3.55□□□□□ -1.84
PTCD2-201ENST00000308077 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
PTCD2-201ENST00000308077 ACYP2P14621 99 aa3.53□□□□□ -1.84
PTCD2-201ENST00000308077 A8MUN3 132 aa3.52□□□□□ -1.85
PTCD2-201ENST00000308077 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
PTCD2-201ENST00000308077 RBM12B-AS1Q9P1G2 102 aa3.48□□□□□ -1.85
PTCD2-201ENST00000308077 Q1T7F1 81 aa3.48□□□□□ -1.85
PTCD2-201ENST00000308077 SEC61GP60059 68 aa3.47□□□□□ -1.85
PTCD2-201ENST00000308077 CHKB-CPT1BH3BT56 60 aa3.46□□□□□ -1.85
PTCD2-201ENST00000308077 PSPHP1O15172 72 aa3.46□□□□□ -1.86
PTCD2-201ENST00000308077 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
PTCD2-201ENST00000308077 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
PTCD2-201ENST00000308077 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
PTCD2-201ENST00000308077 LCA10Q71F78 164 aa3.44□□□□□ -1.86
PTCD2-201ENST00000308077 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
PTCD2-201ENST00000308077 S4R3F8 94 aa3.43□□□□□ -1.86
PTCD2-201ENST00000308077 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
PTCD2-201ENST00000308077 Q5VV11 94 aa3.42□□□□□ -1.86
PTCD2-201ENST00000308077 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
PTCD2-201ENST00000308077 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
PTCD2-201ENST00000308077 V9GYY9 64 aa3.39□□□□□ -1.87
PTCD2-201ENST00000308077 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
PTCD2-201ENST00000308077 A8MU10 97 aa3.38□□□□□ -1.87
PTCD2-201ENST00000308077 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
PTCD2-201ENST00000308077 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PTCD2-201ENST00000308077 KMT2DO14686 5537 aa3.35□□□□□ -1.87
PTCD2-201ENST00000308077 CSAG1Q6PB30 78 aa3.34□□□□□ -1.87
PTCD2-201ENST00000308077 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.88
PTCD2-201ENST00000308077 A0A1B0GU69 56 aa3.33□□□□□ -1.88
PTCD2-201ENST00000308077 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
PTCD2-201ENST00000308077 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
PTCD2-201ENST00000308077 MT1HP80294 61 aa3.32□□□□□ -1.88
PTCD2-201ENST00000308077 A6NED7 52 aa3.3□□□□□ -1.88
PTCD2-201ENST00000308077 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
PTCD2-201ENST00000308077 P0C880 135 aa3.28□□□□□ -1.88
PTCD2-201ENST00000308077 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
PTCD2-201ENST00000308077 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
PTCD2-201ENST00000308077 H0YAA0 97 aa3.28□□□□□ -1.88
PTCD2-201ENST00000308077 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
PTCD2-201ENST00000308077 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
PTCD2-201ENST00000308077 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
PTCD2-201ENST00000308077 M0R2T5 61 aa3.25□□□□□ -1.89
PTCD2-201ENST00000308077 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
PTCD2-201ENST00000308077 A0A1B0GU33 70 aa3.23□□□□□ -1.89
PTCD2-201ENST00000308077 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
PTCD2-201ENST00000308077 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
PTCD2-201ENST00000308077 UQCR11O14957 56 aa3.22□□□□□ -1.89
PTCD2-201ENST00000308077 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
PTCD2-201ENST00000308077 MIR22HGQ0VDD5 57 aa3.22□□□□□ -1.89
PTCD2-201ENST00000308077 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
PTCD2-201ENST00000308077 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
PTCD2-201ENST00000308077 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
PTCD2-201ENST00000308077 MT2AP02795 61 aa3.19□□□□□ -1.9
PTCD2-201ENST00000308077 MT1FP04733 61 aa3.18□□□□□ -1.9
PTCD2-201ENST00000308077 M0QZ58 72 aa3.15□□□□□ -1.9
PTCD2-201ENST00000308077 A6NN06 94 aa3.15□□□□□ -1.91
PTCD2-201ENST00000308077 R4GN34 69 aa3.15□□□□□ -1.91
PTCD2-201ENST00000308077 A0A0D9SG42 100 aa3.14□□□□□ -1.91
PTCD2-201ENST00000308077 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
PTCD2-201ENST00000308077 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
PTCD2-201ENST00000308077 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
PTCD2-201ENST00000308077 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
PTCD2-201ENST00000308077 CRIPTQ9P021 101 aa3.12□□□□□ -1.91
PTCD2-201ENST00000308077 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms