RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
RAB40A-201ENST00000304236 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
RAB40A-201ENST00000304236 UQCR11O14957 56 aa7.66□□□□□ -1.18
RAB40A-201ENST00000304236 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
RAB40A-201ENST00000304236 TNXBP22105 4242 aa7.66□□□□□ -1.18
RAB40A-201ENST00000304236 SEC61GP60059 68 aa7.61□□□□□ -1.19
RAB40A-201ENST00000304236 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
RAB40A-201ENST00000304236 LRP2P98164 4655 aa7.59□□□□□ -1.19
RAB40A-201ENST00000304236 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
RAB40A-201ENST00000304236 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
RAB40A-201ENST00000304236 RNF213Q63HN8 5207 aa7.46□□□□□ -1.21
RAB40A-201ENST00000304236 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
RAB40A-201ENST00000304236 RBM12B-AS1Q9P1G2 102 aa7.41□□□□□ -1.22
RAB40A-201ENST00000304236 A0A1B0GU33 70 aa7.39□□□□□ -1.23
RAB40A-201ENST00000304236 LPAP08519 4548 aa7.38□□□□□ -1.23
RAB40A-201ENST00000304236 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
RAB40A-201ENST00000304236 XP32Q5T750 250 aa7.36□□□□□ -1.23
RAB40A-201ENST00000304236 H0YAA0 97 aa7.34□□□□□ -1.23
RAB40A-201ENST00000304236 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
RAB40A-201ENST00000304236 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
RAB40A-201ENST00000304236 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
RAB40A-201ENST00000304236 S4R3F8 94 aa7.23□□□□□ -1.25
RAB40A-201ENST00000304236 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
RAB40A-201ENST00000304236 K7ERS5 55 aa7.19□□□□□ -1.26
RAB40A-201ENST00000304236 MUC2Q02817 5179 aa7.16□□□□□ -1.26
RAB40A-201ENST00000304236 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
RAB40A-201ENST00000304236 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
RAB40A-201ENST00000304236 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
RAB40A-201ENST00000304236 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
RAB40A-201ENST00000304236 LINC01554Q52M75 96 aa7.09□□□□□ -1.27
RAB40A-201ENST00000304236 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
RAB40A-201ENST00000304236 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
RAB40A-201ENST00000304236 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
RAB40A-201ENST00000304236 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
RAB40A-201ENST00000304236 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
RAB40A-201ENST00000304236 P0C880 135 aa6.99□□□□□ -1.29
RAB40A-201ENST00000304236 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
RAB40A-201ENST00000304236 A0A0D9SG42 100 aa6.97□□□□□ -1.29
RAB40A-201ENST00000304236 ROMO1P60602 79 aa6.97□□□□□ -1.29
RAB40A-201ENST00000304236 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
RAB40A-201ENST00000304236 M0QZ58 72 aa6.89□□□□□ -1.31
RAB40A-201ENST00000304236 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
RAB40A-201ENST00000304236 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
RAB40A-201ENST00000304236 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
RAB40A-201ENST00000304236 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
RAB40A-201ENST00000304236 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
RAB40A-201ENST00000304236 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
RAB40A-201ENST00000304236 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
RAB40A-201ENST00000304236 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
RAB40A-201ENST00000304236 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
RAB40A-201ENST00000304236 H3BS24 57 aa6.72□□□□□ -1.33
RAB40A-201ENST00000304236 MT1HP80294 61 aa6.72□□□□□ -1.33
RAB40A-201ENST00000304236 R4GN34 69 aa6.69□□□□□ -1.34
RAB40A-201ENST00000304236 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
RAB40A-201ENST00000304236 M0R2T5 61 aa6.62□□□□□ -1.35
RAB40A-201ENST00000304236 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
RAB40A-201ENST00000304236 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
RAB40A-201ENST00000304236 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
RAB40A-201ENST00000304236 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.37
RAB40A-201ENST00000304236 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
RAB40A-201ENST00000304236 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
RAB40A-201ENST00000304236 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
RAB40A-201ENST00000304236 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
RAB40A-201ENST00000304236 MT2AP02795 61 aa6.23□□□□□ -1.41
RAB40A-201ENST00000304236 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
RAB40A-201ENST00000304236 MT1FP04733 61 aa6.18□□□□□ -1.42
RAB40A-201ENST00000304236 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
RAB40A-201ENST00000304236 KRTAP9-7A8MTY7 169 aa6.17□□□□□ -1.42
RAB40A-201ENST00000304236 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.43
RAB40A-201ENST00000304236 USH2AO75445 5202 aa6.14□□□□□ -1.43
RAB40A-201ENST00000304236 LCE2BO14633 110 aa6.13□□□□□ -1.43
RAB40A-201ENST00000304236 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
RAB40A-201ENST00000304236 SPRR2GQ9BYE4 73 aa6.13□□□□□ -1.43
RAB40A-201ENST00000304236 TNP1P09430 55 aa6.13□□□□□ -1.43
RAB40A-201ENST00000304236 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
RAB40A-201ENST00000304236 SSPOA2VEC9 5147 aa6.12□□□□□ -1.43
RAB40A-201ENST00000304236 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
RAB40A-201ENST00000304236 NDUFAF8A1L188 74 aa6.09□□□□□ -1.43
RAB40A-201ENST00000304236 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
RAB40A-201ENST00000304236 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
RAB40A-201ENST00000304236 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
RAB40A-201ENST00000304236 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
RAB40A-201ENST00000304236 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
RAB40A-201ENST00000304236 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
RAB40A-201ENST00000304236 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
RAB40A-201ENST00000304236 MT1BP07438 61 aa5.75□□□□□ -1.49
RAB40A-201ENST00000304236 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
RAB40A-201ENST00000304236 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
RAB40A-201ENST00000304236 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
RAB40A-201ENST00000304236 MT1XP80297 61 aa5.69□□□□□ -1.5
RAB40A-201ENST00000304236 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
RAB40A-201ENST00000304236 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
RAB40A-201ENST00000304236 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
RAB40A-201ENST00000304236 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
RAB40A-201ENST00000304236 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
RAB40A-201ENST00000304236 NEBP20929 6669 aa5.44□□□□□ -1.54
RAB40A-201ENST00000304236 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
RAB40A-201ENST00000304236 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
RAB40A-201ENST00000304236 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
RAB40A-201ENST00000304236 KMT2DO14686 5537 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 882.8 ms