RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 A8MUU9 505 aa3.53□□□□□ -1.84
SCAPER-201ENST00000303521 KRTAP10-8P60410 259 aa3.52□□□□□ -1.85
SCAPER-201ENST00000303521 C20orf166-AS1Q96NR2 134 aa3.5□□□□□ -1.85
SCAPER-201ENST00000303521 HSPG2P98160 4391 aa3.49□□□□□ -1.85
SCAPER-201ENST00000303521 LPAP08519 4548 aa3.49□□□□□ -1.85
SCAPER-201ENST00000303521 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SCAPER-201ENST00000303521 KRTAP13-2Q52LG2 175 aa3.48□□□□□ -1.85
SCAPER-201ENST00000303521 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
SCAPER-201ENST00000303521 APOBP04114 4563 aaKnown RBP3.47□□□□□ -1.85
SCAPER-201ENST00000303521 KMT2CQ8NEZ4 4911 aaKnown RBP3.46□□□□□ -1.86
SCAPER-201ENST00000303521 FLG2Q5D862 2391 aaPredicted RBP3.46□□□□□ -1.86
SCAPER-201ENST00000303521 H0YAA0 97 aa3.45□□□□□ -1.86
SCAPER-201ENST00000303521 R4GN34 69 aa3.45□□□□□ -1.86
SCAPER-201ENST00000303521 M0QZ58 72 aa3.44□□□□□ -1.86
SCAPER-201ENST00000303521 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
SCAPER-201ENST00000303521 TNXBP22105 4242 aa3.44□□□□□ -1.86
SCAPER-201ENST00000303521 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
SCAPER-201ENST00000303521 XP32Q5T750 250 aa3.42□□□□□ -1.86
SCAPER-201ENST00000303521 FAT1Q14517 4588 aa3.41□□□□□ -1.86
SCAPER-201ENST00000303521 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.87
SCAPER-201ENST00000303521 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
SCAPER-201ENST00000303521 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
SCAPER-201ENST00000303521 KRTAP10-10P60014 251 aa3.36□□□□□ -1.87
SCAPER-201ENST00000303521 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
SCAPER-201ENST00000303521 RYR3Q15413 4870 aa3.35□□□□□ -1.87
SCAPER-201ENST00000303521 RYR1P21817 5038 aa3.33□□□□□ -1.88
SCAPER-201ENST00000303521 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
SCAPER-201ENST00000303521 P0C880 135 aa3.33□□□□□ -1.88
SCAPER-201ENST00000303521 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
SCAPER-201ENST00000303521 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
SCAPER-201ENST00000303521 RYR2Q92736 4967 aa3.29□□□□□ -1.88
SCAPER-201ENST00000303521 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
SCAPER-201ENST00000303521 KRTAP4-5Q9BYR2 181 aa3.24□□□□□ -1.89
SCAPER-201ENST00000303521 TNP1P09430 55 aa3.22□□□□□ -1.89
SCAPER-201ENST00000303521 LRP2P98164 4655 aa3.18□□□□□ -1.9
SCAPER-201ENST00000303521 EPPK1P58107 5090 aaKnown RBP3.17□□□□□ -1.9
SCAPER-201ENST00000303521 MUC2Q02817 5179 aa3.16□□□□□ -1.9
SCAPER-201ENST00000303521 KRTAP12-2P59991 146 aa3.16□□□□□ -1.9
SCAPER-201ENST00000303521 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.9
SCAPER-201ENST00000303521 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
SCAPER-201ENST00000303521 KRTAP3-1Q9BYR8 98 aa3.15□□□□□ -1.91
SCAPER-201ENST00000303521 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
SCAPER-201ENST00000303521 KRTAP17-1Q9BYP8 105 aa3.11□□□□□ -1.91
SCAPER-201ENST00000303521 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
SCAPER-201ENST00000303521 KRTAP10-6P60371 365 aaPredicted RBP3.09□□□□□ -1.91
SCAPER-201ENST00000303521 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.92
SCAPER-201ENST00000303521 PCLOQ9Y6V0 5065 aa3.08□□□□□ -1.92
SCAPER-201ENST00000303521 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
SCAPER-201ENST00000303521 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.92
SCAPER-201ENST00000303521 KRTAP3-2Q9BYR7 98 aa3.01□□□□□ -1.93
SCAPER-201ENST00000303521 BIRC6Q9NR09 4857 aa3□□□□□ -1.93
SCAPER-201ENST00000303521 KRTAP3-3Q9BYR6 98 aa2.97□□□□□ -1.93
SCAPER-201ENST00000303521 INE1O15225 51 aa2.96□□□□□ -1.94
SCAPER-201ENST00000303521 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
SCAPER-201ENST00000303521 KRTAP23-1A1A580 65 aa2.9□□□□□ -1.94
SCAPER-201ENST00000303521 HERC1Q15751 4861 aa2.89□□□□□ -1.95
SCAPER-201ENST00000303521 MT1HP80294 61 aa2.86□□□□□ -1.95
SCAPER-201ENST00000303521 LCE2DQ5TA82 110 aaPredicted RBP2.84□□□□□ -1.95
SCAPER-201ENST00000303521 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
SCAPER-201ENST00000303521 UBR4Q5T4S7 5183 aa2.82□□□□□ -1.96
SCAPER-201ENST00000303521 KRTAP9-6A0A140TA67 174 aa2.82□□□□□ -1.96
SCAPER-201ENST00000303521 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
SCAPER-201ENST00000303521 LORP23490 312 aaPredicted RBP2.79□□□□□ -1.96
SCAPER-201ENST00000303521 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
SCAPER-201ENST00000303521 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
SCAPER-201ENST00000303521 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
SCAPER-201ENST00000303521 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
SCAPER-201ENST00000303521 HERC2O95714 4834 aa2.76□□□□□ -1.97
SCAPER-201ENST00000303521 MT2AP02795 61 aa2.72□□□□□ -1.97
SCAPER-201ENST00000303521 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
SCAPER-201ENST00000303521 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
SCAPER-201ENST00000303521 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
SCAPER-201ENST00000303521 LCE2CQ5TA81 110 aa2.64□□□□□ -1.99
SCAPER-201ENST00000303521 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
SCAPER-201ENST00000303521 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
SCAPER-201ENST00000303521 SPRR2EP22531 72 aa2.61□□□□□ -1.99
SCAPER-201ENST00000303521 SPRR2BP35325 72 aa2.61□□□□□ -1.99
SCAPER-201ENST00000303521 SPRR2AP35326 72 aa2.61□□□□□ -1.99
SCAPER-201ENST00000303521 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
SCAPER-201ENST00000303521 MT1FP04733 61 aa2.6□□□□□ -1.99
SCAPER-201ENST00000303521 KRTAP19-4Q3LI73 84 aa2.6□□□□□ -1.99
SCAPER-201ENST00000303521 USH2AO75445 5202 aa2.59□□□□□ -2
SCAPER-201ENST00000303521 KRTAP19-1Q8IUB9 90 aa2.57□□□□□ -2
SCAPER-201ENST00000303521 SPRR2DP22532 72 aa2.56□□□□□ -2
SCAPER-201ENST00000303521 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
SCAPER-201ENST00000303521 KRTAP10-7P60409 375 aaPredicted RBP2.56□□□□□ -2
SCAPER-201ENST00000303521 KMT2DO14686 5537 aa2.56□□□□□ -2
SCAPER-201ENST00000303521 LCE2AQ5TA79 106 aaPredicted RBP2.55□□□□□ -2
SCAPER-201ENST00000303521 KRTAP10-5P60370 271 aa2.54□□□□□ -2
SCAPER-201ENST00000303521 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
SCAPER-201ENST00000303521 LCE2BO14633 110 aa2.52□□□□□ -2.01
SCAPER-201ENST00000303521 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
SCAPER-201ENST00000303521 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
SCAPER-201ENST00000303521 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
SCAPER-201ENST00000303521 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
SCAPER-201ENST00000303521 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
SCAPER-201ENST00000303521 KRTAP9-3Q9BYQ3 159 aa2.46□□□□□ -2.02
SCAPER-201ENST00000303521 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
SCAPER-201ENST00000303521 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
SCAPER-201ENST00000303521 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms