RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
CDH16-201ENST00000299752 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
CDH16-201ENST00000299752 PMAIP1Q13794 54 aa7.29□□□□□ -1.24
CDH16-201ENST00000299752 MUC2Q02817 5179 aa7.27□□□□□ -1.25
CDH16-201ENST00000299752 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
CDH16-201ENST00000299752 LCA10Q71F78 164 aa7.2□□□□□ -1.26
CDH16-201ENST00000299752 A0A1B0GU69 56 aa7.2□□□□□ -1.26
CDH16-201ENST00000299752 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
CDH16-201ENST00000299752 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
CDH16-201ENST00000299752 A6NED7 52 aa7.18□□□□□ -1.26
CDH16-201ENST00000299752 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
CDH16-201ENST00000299752 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
CDH16-201ENST00000299752 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
CDH16-201ENST00000299752 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
CDH16-201ENST00000299752 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
CDH16-201ENST00000299752 S4R3F8 94 aa7.09□□□□□ -1.27
CDH16-201ENST00000299752 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
CDH16-201ENST00000299752 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
CDH16-201ENST00000299752 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
CDH16-201ENST00000299752 A6NN06 94 aa7.06□□□□□ -1.28
CDH16-201ENST00000299752 UQCR11O14957 56 aa6.99□□□□□ -1.29
CDH16-201ENST00000299752 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
CDH16-201ENST00000299752 FAT4Q6V0I7 4981 aa6.94□□□□□ -1.3
CDH16-201ENST00000299752 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
CDH16-201ENST00000299752 A0A1B0GU33 70 aa6.93□□□□□ -1.3
CDH16-201ENST00000299752 KRTAP19-2Q3LHN2 52 aa6.9□□□□□ -1.3
CDH16-201ENST00000299752 CSAG1Q6PB30 78 aa6.9□□□□□ -1.3
CDH16-201ENST00000299752 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
CDH16-201ENST00000299752 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
CDH16-201ENST00000299752 H0YAA0 97 aa6.87□□□□□ -1.31
CDH16-201ENST00000299752 P0C880 135 aa6.84□□□□□ -1.32
CDH16-201ENST00000299752 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.32
CDH16-201ENST00000299752 H3BS24 57 aa6.81□□□□□ -1.32
CDH16-201ENST00000299752 FLGP20930 4061 aaPredicted RBP6.79□□□□□ -1.32
CDH16-201ENST00000299752 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
CDH16-201ENST00000299752 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
CDH16-201ENST00000299752 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
CDH16-201ENST00000299752 A0A0D9SG42 100 aa6.68□□□□□ -1.34
CDH16-201ENST00000299752 M0R2T5 61 aa6.68□□□□□ -1.34
CDH16-201ENST00000299752 MT1HP80294 61 aa6.64□□□□□ -1.35
CDH16-201ENST00000299752 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
CDH16-201ENST00000299752 M0QZ58 72 aa6.6□□□□□ -1.35
CDH16-201ENST00000299752 LINC01554Q52M75 96 aa6.58□□□□□ -1.36
CDH16-201ENST00000299752 R4GN34 69 aa6.57□□□□□ -1.36
CDH16-201ENST00000299752 K7ERS5 55 aa6.57□□□□□ -1.36
CDH16-201ENST00000299752 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
CDH16-201ENST00000299752 SPINT4Q6UDR6 99 aa6.49□□□□□ -1.37
CDH16-201ENST00000299752 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
CDH16-201ENST00000299752 MT2AP02795 61 aa6.39□□□□□ -1.39
CDH16-201ENST00000299752 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
CDH16-201ENST00000299752 MT1FP04733 61 aa6.39□□□□□ -1.39
CDH16-201ENST00000299752 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
CDH16-201ENST00000299752 ROMO1P60602 79 aa6.35□□□□□ -1.39
CDH16-201ENST00000299752 CRIPTQ9P021 101 aa6.35□□□□□ -1.39
CDH16-201ENST00000299752 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
CDH16-201ENST00000299752 A0A0A0MQY5 61 aa6.33□□□□□ -1.4
CDH16-201ENST00000299752 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
CDH16-201ENST00000299752 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
CDH16-201ENST00000299752 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
CDH16-201ENST00000299752 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
CDH16-201ENST00000299752 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
CDH16-201ENST00000299752 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
CDH16-201ENST00000299752 USH2AO75445 5202 aa6.08□□□□□ -1.44
CDH16-201ENST00000299752 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
CDH16-201ENST00000299752 LCE2BO14633 110 aa6.03□□□□□ -1.44
CDH16-201ENST00000299752 MT1BP07438 61 aa6.01□□□□□ -1.45
CDH16-201ENST00000299752 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
CDH16-201ENST00000299752 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
CDH16-201ENST00000299752 TNP1P09430 55 aa5.88□□□□□ -1.47
CDH16-201ENST00000299752 NDUFAF8A1L188 74 aa5.83□□□□□ -1.48
CDH16-201ENST00000299752 MT1XP80297 61 aa5.83□□□□□ -1.48
CDH16-201ENST00000299752 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
CDH16-201ENST00000299752 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
CDH16-201ENST00000299752 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
CDH16-201ENST00000299752 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
CDH16-201ENST00000299752 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
CDH16-201ENST00000299752 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
CDH16-201ENST00000299752 KMT2DO14686 5537 aa5.67□□□□□ -1.5
CDH16-201ENST00000299752 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
CDH16-201ENST00000299752 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
CDH16-201ENST00000299752 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
CDH16-201ENST00000299752 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
CDH16-201ENST00000299752 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
CDH16-201ENST00000299752 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
CDH16-201ENST00000299752 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
CDH16-201ENST00000299752 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
CDH16-201ENST00000299752 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
CDH16-201ENST00000299752 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
CDH16-201ENST00000299752 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
CDH16-201ENST00000299752 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
CDH16-201ENST00000299752 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
CDH16-201ENST00000299752 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
CDH16-201ENST00000299752 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
CDH16-201ENST00000299752 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
CDH16-201ENST00000299752 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
CDH16-201ENST00000299752 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
CDH16-201ENST00000299752 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
CDH16-201ENST00000299752 MT1EP04732 61 aa5.08□□□□□ -1.6
CDH16-201ENST00000299752 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
CDH16-201ENST00000299752 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms