RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 LCA10Q71F78 164 aa12.09□□□□□ -0.47
GTF2A1-201ENST00000298173 S4R3F8 94 aa12.09□□□□□ -0.47
GTF2A1-201ENST00000298173 CHKB-CPT1BH3BT56 60 aa12.08□□□□□ -0.48
GTF2A1-201ENST00000298173 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
GTF2A1-201ENST00000298173 FLGP20930 4061 aaPredicted RBP12.08□□□□□ -0.48
GTF2A1-201ENST00000298173 FAT4Q6V0I7 4981 aa12.02□□□□□ -0.49
GTF2A1-201ENST00000298173 SPTSSBQ8NFR3 76 aa11.91□□□□□ -0.5
GTF2A1-201ENST00000298173 MT1HP80294 61 aa11.9□□□□□ -0.5
GTF2A1-201ENST00000298173 CSAG1Q6PB30 78 aa11.87□□□□□ -0.51
GTF2A1-201ENST00000298173 SMIM26A0A096LP01 95 aa11.83□□□□□ -0.52
GTF2A1-201ENST00000298173 LINC01558Q9Y6Z2 57 aa11.7□□□□□ -0.54
GTF2A1-201ENST00000298173 Q1T7F1 81 aa11.69□□□□□ -0.54
GTF2A1-201ENST00000298173 M0R2T5 61 aa11.68□□□□□ -0.54
GTF2A1-201ENST00000298173 LCE2AQ5TA79 106 aaPredicted RBP11.65□□□□□ -0.55
GTF2A1-201ENST00000298173 H0YAA0 97 aa11.63□□□□□ -0.55
GTF2A1-201ENST00000298173 V9GYY9 64 aa11.63□□□□□ -0.55
GTF2A1-201ENST00000298173 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
GTF2A1-201ENST00000298173 A0A1B0GU69 56 aa11.54□□□□□ -0.56
GTF2A1-201ENST00000298173 KRTAP10-6P60371 365 aaPredicted RBP11.54□□□□□ -0.56
GTF2A1-201ENST00000298173 ADM2Q7Z4H4 148 aa11.54□□□□□ -0.56
GTF2A1-201ENST00000298173 SEC61GP60059 68 aa11.52□□□□□ -0.57
GTF2A1-201ENST00000298173 PRR15LQ9BU68 103 aa11.48□□□□□ -0.57
GTF2A1-201ENST00000298173 P0C880 135 aa11.46□□□□□ -0.57
GTF2A1-201ENST00000298173 KRTAP9-8Q9BYQ0 159 aa11.46□□□□□ -0.57
GTF2A1-201ENST00000298173 LORP23490 312 aaPredicted RBP11.46□□□□□ -0.58
GTF2A1-201ENST00000298173 PSPHP1O15172 72 aa11.45□□□□□ -0.58
GTF2A1-201ENST00000298173 Q5VV11 94 aa11.39□□□□□ -0.59
GTF2A1-201ENST00000298173 MT2AP02795 61 aa11.37□□□□□ -0.59
GTF2A1-201ENST00000298173 MT1FP04733 61 aa11.3□□□□□ -0.6
GTF2A1-201ENST00000298173 A0A1B0GU33 70 aa11.3□□□□□ -0.6
GTF2A1-201ENST00000298173 KRTAP10-10P60014 251 aa11.23□□□□□ -0.61
GTF2A1-201ENST00000298173 CRIPTQ9P021 101 aa11.19□□□□□ -0.62
GTF2A1-201ENST00000298173 KRTAP13-4Q3LI77 160 aa11.17□□□□□ -0.62
GTF2A1-201ENST00000298173 M0QZ58 72 aa11.16□□□□□ -0.62
GTF2A1-201ENST00000298173 UQCR11O14957 56 aa11.16□□□□□ -0.62
GTF2A1-201ENST00000298173 R4GN34 69 aa11.13□□□□□ -0.63
GTF2A1-201ENST00000298173 SPATA8Q6RVD6 105 aa11.11□□□□□ -0.63
GTF2A1-201ENST00000298173 A6NED7 52 aa11.08□□□□□ -0.64
GTF2A1-201ENST00000298173 KRTAP9-3Q9BYQ3 159 aa11.06□□□□□ -0.64
GTF2A1-201ENST00000298173 SPRR2GQ9BYE4 73 aa11.05□□□□□ -0.64
GTF2A1-201ENST00000298173 KRTAP19-1Q8IUB9 90 aa11.04□□□□□ -0.64
GTF2A1-201ENST00000298173 MIR22HGQ0VDD5 57 aa11.01□□□□□ -0.65
GTF2A1-201ENST00000298173 A8MU10 97 aa10.92□□□□□ -0.66
GTF2A1-201ENST00000298173 CDC42SE1Q9NRR8 79 aa10.89□□□□□ -0.67
GTF2A1-201ENST00000298173 LINC01554Q52M75 96 aa10.88□□□□□ -0.67
GTF2A1-201ENST00000298173 A0A0D9SG42 100 aa10.86□□□□□ -0.67
GTF2A1-201ENST00000298173 KRTAP19-8Q3LI54 63 aa10.8□□□□□ -0.68
GTF2A1-201ENST00000298173 LCE2BO14633 110 aa10.78□□□□□ -0.68
GTF2A1-201ENST00000298173 A6NN06 94 aa10.77□□□□□ -0.69
GTF2A1-201ENST00000298173 BRK1Q8WUW1 75 aa10.77□□□□□ -0.69
GTF2A1-201ENST00000298173 KRTAP12-1P59990 96 aa10.73□□□□□ -0.69
GTF2A1-201ENST00000298173 KRTAP12-2P59991 146 aa10.68□□□□□ -0.7
GTF2A1-201ENST00000298173 MT1BP07438 61 aa10.67□□□□□ -0.7
GTF2A1-201ENST00000298173 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
GTF2A1-201ENST00000298173 SPINT4Q6UDR6 99 aa10.63□□□□□ -0.71
GTF2A1-201ENST00000298173 PLAC4Q8WY50 150 aa10.56□□□□□ -0.72
GTF2A1-201ENST00000298173 USH2AO75445 5202 aa10.54□□□□□ -0.72
GTF2A1-201ENST00000298173 K7ERS5 55 aa10.51□□□□□ -0.73
GTF2A1-201ENST00000298173 PRO0628Q9UI54 55 aa10.44□□□□□ -0.74
GTF2A1-201ENST00000298173 CAMK2N1Q7Z7J9 78 aa10.37□□□□□ -0.75
GTF2A1-201ENST00000298173 KRTAP9-2Q9BYQ4 174 aa10.32□□□□□ -0.76
GTF2A1-201ENST00000298173 MT1XP80297 61 aa10.26□□□□□ -0.77
GTF2A1-201ENST00000298173 FSIP2Q5CZC0 6907 aa10.25□□□□□ -0.77
GTF2A1-201ENST00000298173 KRTAP10-5P60370 271 aa10.25□□□□□ -0.77
GTF2A1-201ENST00000298173 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
GTF2A1-201ENST00000298173 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
GTF2A1-201ENST00000298173 C10orf95Q9H7T3 257 aa10.18□□□□□ -0.78
GTF2A1-201ENST00000298173 KRTAP19-6Q3LI70 58 aa10.18□□□□□ -0.78
GTF2A1-201ENST00000298173 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
GTF2A1-201ENST00000298173 ROMO1P60602 79 aa10.09□□□□□ -0.79
GTF2A1-201ENST00000298173 KRTAP9-6A0A140TA67 174 aa9.96□□□□□ -0.82
GTF2A1-201ENST00000298173 CRCT1Q9UGL9 99 aa9.93□□□□□ -0.82
GTF2A1-201ENST00000298173 TNP1P09430 55 aa9.87□□□□□ -0.83
GTF2A1-201ENST00000298173 FCGBPQ9Y6R7 5405 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-201ENST00000298173 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
GTF2A1-201ENST00000298173 KRTAP10-7P60409 375 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-201ENST00000298173 KRTAP10-12P60413 245 aa9.75□□□□□ -0.85
GTF2A1-201ENST00000298173 KTN1-AS1Q86SY8 53 aa9.69□□□□□ -0.86
GTF2A1-201ENST00000298173 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
GTF2A1-201ENST00000298173 KRTAP23-1A1A580 65 aa9.55□□□□□ -0.88
GTF2A1-201ENST00000298173 KMT2DO14686 5537 aa9.52□□□□□ -0.89
GTF2A1-201ENST00000298173 KRTAP4-8A0A0G2JLE6 195 aa9.51□□□□□ -0.89
GTF2A1-201ENST00000298173 KRTAP4-8Q9BYQ9 185 aa9.51□□□□□ -0.89
GTF2A1-201ENST00000298173 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
GTF2A1-201ENST00000298173 PP632Q6XCG6 107 aa9.45□□□□□ -0.9
GTF2A1-201ENST00000298173 MACF1Q9UPN3 7388 aaKnown RBP9.39□□□□□ -0.91
GTF2A1-201ENST00000298173 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
GTF2A1-201ENST00000298173 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
GTF2A1-201ENST00000298173 KRTAP19-5Q3LI72 72 aa9.2□□□□□ -0.94
GTF2A1-201ENST00000298173 KRTAP19-7Q3SYF9 63 aa9.17□□□□□ -0.94
GTF2A1-201ENST00000298173 SYNE2Q8WXH0 6885 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-201ENST00000298173 KRTAP12-3P60328 96 aa9.14□□□□□ -0.95
GTF2A1-201ENST00000298173 SVIPQ8NHG7 77 aa9.07□□□□□ -0.96
GTF2A1-201ENST00000298173 KRTAP5-9P26371 169 aa9.01□□□□□ -0.97
GTF2A1-201ENST00000298173 MT1EP04732 61 aa9□□□□□ -0.97
GTF2A1-201ENST00000298173 SPRR2FQ96RM1 72 aa8.96□□□□□ -0.98
GTF2A1-201ENST00000298173 KRTAP6-3Q3LI67 103 aa8.94□□□□□ -0.98
GTF2A1-201ENST00000298173 KRTAP15-1Q3LI76 137 aa8.91□□□□□ -0.98
GTF2A1-201ENST00000298173 KRTAP9-7A8MTY7 169 aa8.9□□□□□ -0.98
GTF2A1-201ENST00000298173 MUC12Q9UKN1 5478 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms