RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 HERC2O95714 4834 aa3.81□□□□□ -1.8
TMC1-201ENST00000297784 KRTAP4-5Q9BYR2 181 aa3.8□□□□□ -1.8
TMC1-201ENST00000297784 CSAG1Q6PB30 78 aa3.79□□□□□ -1.8
TMC1-201ENST00000297784 Q8N1X5 172 aa3.78□□□□□ -1.8
TMC1-201ENST00000297784 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
TMC1-201ENST00000297784 SSBP3-AS1Q7Z2R9 100 aa3.77□□□□□ -1.81
TMC1-201ENST00000297784 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
TMC1-201ENST00000297784 FLG2Q5D862 2391 aaPredicted RBP3.76□□□□□ -1.81
TMC1-201ENST00000297784 TYMSOSQ8TAI1 123 aa3.74□□□□□ -1.81
TMC1-201ENST00000297784 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
TMC1-201ENST00000297784 MT1HL1P0DM35 61 aa3.71□□□□□ -1.82
TMC1-201ENST00000297784 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
TMC1-201ENST00000297784 IGKV2D-30A0A075B6S6 120 aa3.69□□□□□ -1.82
TMC1-201ENST00000297784 SPINK1P00995 79 aa3.69□□□□□ -1.82
TMC1-201ENST00000297784 LINC00304Q8N9R0 145 aa3.69□□□□□ -1.82
TMC1-201ENST00000297784 LPAP08519 4548 aa3.69□□□□□ -1.82
TMC1-201ENST00000297784 A8MUU9 505 aa3.68□□□□□ -1.82
TMC1-201ENST00000297784 ROMO1P60602 79 aa3.68□□□□□ -1.82
TMC1-201ENST00000297784 RPS29P62273 56 aaKnown RBP3.67□□□□□ -1.82
TMC1-201ENST00000297784 KRTAP16-1A8MUX0 517 aa3.67□□□□□ -1.82
TMC1-201ENST00000297784 DMBT1Q9UGM3 2413 aaPredicted RBP3.67□□□□□ -1.82
TMC1-201ENST00000297784 HERC1Q15751 4861 aa3.67□□□□□ -1.82
TMC1-201ENST00000297784 XP32Q5T750 250 aa3.65□□□□□ -1.83
TMC1-201ENST00000297784 H0YAA0 97 aa3.63□□□□□ -1.83
TMC1-201ENST00000297784 LRP2P98164 4655 aa3.62□□□□□ -1.83
TMC1-201ENST00000297784 A0A1B0GU33 70 aa3.57□□□□□ -1.84
TMC1-201ENST00000297784 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
TMC1-201ENST00000297784 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
TMC1-201ENST00000297784 P0C880 135 aa3.56□□□□□ -1.84
TMC1-201ENST00000297784 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
TMC1-201ENST00000297784 C9orf92A6NGG3 77 aa3.55□□□□□ -1.84
TMC1-201ENST00000297784 MUC2Q02817 5179 aa3.55□□□□□ -1.84
TMC1-201ENST00000297784 K7ERS5 55 aa3.53□□□□□ -1.84
TMC1-201ENST00000297784 SEC61BP60468 96 aaKnown RBP3.53□□□□□ -1.84
TMC1-201ENST00000297784 C20orf166-AS1Q96NR2 134 aa3.51□□□□□ -1.85
TMC1-201ENST00000297784 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
TMC1-201ENST00000297784 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
TMC1-201ENST00000297784 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
TMC1-201ENST00000297784 UBR4Q5T4S7 5183 aa3.47□□□□□ -1.85
TMC1-201ENST00000297784 COX6B2Q6YFQ2 88 aa3.47□□□□□ -1.85
TMC1-201ENST00000297784 CRIPTQ9P021 101 aa3.46□□□□□ -1.86
TMC1-201ENST00000297784 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
TMC1-201ENST00000297784 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
TMC1-201ENST00000297784 KRTAP23-1A1A580 65 aa3.44□□□□□ -1.86
TMC1-201ENST00000297784 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
TMC1-201ENST00000297784 SPINT4Q6UDR6 99 aa3.43□□□□□ -1.86
TMC1-201ENST00000297784 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
TMC1-201ENST00000297784 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
TMC1-201ENST00000297784 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
TMC1-201ENST00000297784 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
TMC1-201ENST00000297784 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
TMC1-201ENST00000297784 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
TMC1-201ENST00000297784 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
TMC1-201ENST00000297784 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
TMC1-201ENST00000297784 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
TMC1-201ENST00000297784 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
TMC1-201ENST00000297784 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
TMC1-201ENST00000297784 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
TMC1-201ENST00000297784 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
TMC1-201ENST00000297784 S4R3F8 94 aa3.31□□□□□ -1.88
TMC1-201ENST00000297784 A0A0D9SG42 100 aa3.31□□□□□ -1.88
TMC1-201ENST00000297784 KRTAP19-2Q3LHN2 52 aa3.3□□□□□ -1.88
TMC1-201ENST00000297784 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
TMC1-201ENST00000297784 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
TMC1-201ENST00000297784 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
TMC1-201ENST00000297784 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
TMC1-201ENST00000297784 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
TMC1-201ENST00000297784 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
TMC1-201ENST00000297784 M0QZ58 72 aa3.19□□□□□ -1.9
TMC1-201ENST00000297784 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
TMC1-201ENST00000297784 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
TMC1-201ENST00000297784 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.9
TMC1-201ENST00000297784 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
TMC1-201ENST00000297784 MT1HP80294 61 aa3.13□□□□□ -1.91
TMC1-201ENST00000297784 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
TMC1-201ENST00000297784 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
TMC1-201ENST00000297784 KRTAP9-8Q9BYQ0 159 aa3.03□□□□□ -1.92
TMC1-201ENST00000297784 M0R2T5 61 aa3.01□□□□□ -1.93
TMC1-201ENST00000297784 R4GN34 69 aa3□□□□□ -1.93
TMC1-201ENST00000297784 LCE4AQ5TA78 99 aa3□□□□□ -1.93
TMC1-201ENST00000297784 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
TMC1-201ENST00000297784 MT2AP02795 61 aa2.98□□□□□ -1.93
TMC1-201ENST00000297784 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
TMC1-201ENST00000297784 MT1FP04733 61 aa2.98□□□□□ -1.93
TMC1-201ENST00000297784 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
TMC1-201ENST00000297784 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.94
TMC1-201ENST00000297784 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
TMC1-201ENST00000297784 USH2AO75445 5202 aa2.94□□□□□ -1.94
TMC1-201ENST00000297784 KRTAP9-3Q9BYQ3 159 aa2.93□□□□□ -1.94
TMC1-201ENST00000297784 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
TMC1-201ENST00000297784 SPRR2GQ9BYE4 73 aa2.91□□□□□ -1.94
TMC1-201ENST00000297784 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
TMC1-201ENST00000297784 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
TMC1-201ENST00000297784 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.95
TMC1-201ENST00000297784 TNP1P09430 55 aa2.83□□□□□ -1.96
TMC1-201ENST00000297784 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
TMC1-201ENST00000297784 MT1BP07438 61 aa2.81□□□□□ -1.96
TMC1-201ENST00000297784 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
TMC1-201ENST00000297784 INE1O15225 51 aa2.8□□□□□ -1.96
TMC1-201ENST00000297784 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms