RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 PRAC1Q96KF2 57 aa13.05□□□□□ -0.32
SHISA5-201ENST00000296444 IGKV2-30P06310 120 aa13.02□□□□□ -0.32
SHISA5-201ENST00000296444 UQCR11O14957 56 aa13.02□□□□□ -0.33
SHISA5-201ENST00000296444 MIR22HGQ0VDD5 57 aa13□□□□□ -0.33
SHISA5-201ENST00000296444 LINC01554Q52M75 96 aa12.97□□□□□ -0.33
SHISA5-201ENST00000296444 C20orf166-AS1Q96NR2 134 aa12.97□□□□□ -0.33
SHISA5-201ENST00000296444 A8MUU9 505 aa12.96□□□□□ -0.33
SHISA5-201ENST00000296444 HERC1Q15751 4861 aa12.95□□□□□ -0.34
SHISA5-201ENST00000296444 ADM2Q7Z4H4 148 aa12.95□□□□□ -0.34
SHISA5-201ENST00000296444 IGKV2D-30A0A075B6S6 120 aa12.94□□□□□ -0.34
SHISA5-201ENST00000296444 XP32Q5T750 250 aa12.85□□□□□ -0.35
SHISA5-201ENST00000296444 J3QL48 77 aa12.77□□□□□ -0.36
SHISA5-201ENST00000296444 RPL37P61927 97 aaKnown RBP12.69□□□□□ -0.38
SHISA5-201ENST00000296444 CSAG1Q6PB30 78 aa12.67□□□□□ -0.38
SHISA5-201ENST00000296444 TPRXLQ17RH7 258 aa12.61□□□□□ -0.39
SHISA5-201ENST00000296444 MUC2Q02817 5179 aa12.56□□□□□ -0.4
SHISA5-201ENST00000296444 HMCN2Q8NDA2 5059 aa12.55□□□□□ -0.4
SHISA5-201ENST00000296444 KRTAP3-1Q9BYR8 98 aa12.54□□□□□ -0.4
SHISA5-201ENST00000296444 H3BS24 57 aa12.42□□□□□ -0.42
SHISA5-201ENST00000296444 MUC17Q685J3 4493 aa12.39□□□□□ -0.43
SHISA5-201ENST00000296444 H0YAA0 97 aa12.38□□□□□ -0.43
SHISA5-201ENST00000296444 KRTAP25-1Q3LHN0 102 aa12.35□□□□□ -0.43
SHISA5-201ENST00000296444 KRTAP4-1Q9BYQ7 146 aa12.33□□□□□ -0.44
SHISA5-201ENST00000296444 A0A1B0GU33 70 aa12.29□□□□□ -0.44
SHISA5-201ENST00000296444 COX6B2Q6YFQ2 88 aa12.26□□□□□ -0.45
SHISA5-201ENST00000296444 H1FX-AS1Q4G0G2 97 aa12.24□□□□□ -0.45
SHISA5-201ENST00000296444 UBR4Q5T4S7 5183 aa12.19□□□□□ -0.46
SHISA5-201ENST00000296444 RNF213Q63HN8 5207 aa12.18□□□□□ -0.46
SHISA5-201ENST00000296444 ROMO1P60602 79 aa12.14□□□□□ -0.47
SHISA5-201ENST00000296444 K7ERS5 55 aa12.13□□□□□ -0.47
SHISA5-201ENST00000296444 SEC61BP60468 96 aaKnown RBP12.1□□□□□ -0.47
SHISA5-201ENST00000296444 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
SHISA5-201ENST00000296444 FAT4Q6V0I7 4981 aa11.96□□□□□ -0.5
SHISA5-201ENST00000296444 KRTAP19-2Q3LHN2 52 aa11.91□□□□□ -0.5
SHISA5-201ENST00000296444 S4R3F8 94 aa11.88□□□□□ -0.51
SHISA5-201ENST00000296444 CRIPTQ9P021 101 aa11.78□□□□□ -0.52
SHISA5-201ENST00000296444 FLGP20930 4061 aaPredicted RBP11.75□□□□□ -0.53
SHISA5-201ENST00000296444 P0C880 135 aa11.72□□□□□ -0.53
SHISA5-201ENST00000296444 KRTAP10-6P60371 365 aaPredicted RBP11.66□□□□□ -0.54
SHISA5-201ENST00000296444 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
SHISA5-201ENST00000296444 LCE2CQ5TA81 110 aa11.57□□□□□ -0.56
SHISA5-201ENST00000296444 KRTAP13-4Q3LI77 160 aa11.56□□□□□ -0.56
SHISA5-201ENST00000296444 SPINT4Q6UDR6 99 aa11.54□□□□□ -0.56
SHISA5-201ENST00000296444 A0A0D9SG42 100 aa11.49□□□□□ -0.57
SHISA5-201ENST00000296444 KRTAP15-1Q3LI76 137 aa11.37□□□□□ -0.59
SHISA5-201ENST00000296444 LORP23490 312 aaPredicted RBP11.34□□□□□ -0.59
SHISA5-201ENST00000296444 C10orf95Q9H7T3 257 aa11.33□□□□□ -0.6
SHISA5-201ENST00000296444 MT1HP80294 61 aa11.26□□□□□ -0.61
SHISA5-201ENST00000296444 KRTAP12-2P59991 146 aa11.26□□□□□ -0.61
SHISA5-201ENST00000296444 NDUFAF8A1L188 74 aa11.2□□□□□ -0.62
SHISA5-201ENST00000296444 KRTAP12-1P59990 96 aa11.19□□□□□ -0.62
SHISA5-201ENST00000296444 M0QZ58 72 aa11.1□□□□□ -0.63
SHISA5-201ENST00000296444 M0R2T5 61 aa11.1□□□□□ -0.63
SHISA5-201ENST00000296444 R4GN34 69 aa10.97□□□□□ -0.65
SHISA5-201ENST00000296444 KRTAP9-8Q9BYQ0 159 aa10.9□□□□□ -0.66
SHISA5-201ENST00000296444 MT1FP04733 61 aa10.86□□□□□ -0.67
SHISA5-201ENST00000296444 MT2AP02795 61 aa10.85□□□□□ -0.67
SHISA5-201ENST00000296444 A0A0A0MQY5 61 aa10.82□□□□□ -0.68
SHISA5-201ENST00000296444 KRTAP10-10P60014 251 aa10.74□□□□□ -0.69
SHISA5-201ENST00000296444 KRTAP19-1Q8IUB9 90 aa10.7□□□□□ -0.7
SHISA5-201ENST00000296444 LCE2AQ5TA79 106 aaPredicted RBP10.68□□□□□ -0.7
SHISA5-201ENST00000296444 PLAC4Q8WY50 150 aa10.62□□□□□ -0.71
SHISA5-201ENST00000296444 SPRR2GQ9BYE4 73 aa10.57□□□□□ -0.72
SHISA5-201ENST00000296444 KRTAP9-3Q9BYQ3 159 aa10.47□□□□□ -0.73
SHISA5-201ENST00000296444 USH2AO75445 5202 aa10.47□□□□□ -0.73
SHISA5-201ENST00000296444 PP632Q6XCG6 107 aa10.44□□□□□ -0.74
SHISA5-201ENST00000296444 LUZP6Q538Z0 58 aa10.32□□□□□ -0.76
SHISA5-201ENST00000296444 CAMK2N1Q7Z7J9 78 aa10.29□□□□□ -0.76
SHISA5-201ENST00000296444 MT1BP07438 61 aa10.28□□□□□ -0.76
SHISA5-201ENST00000296444 LCE2BO14633 110 aa10.26□□□□□ -0.77
SHISA5-201ENST00000296444 KRTAP19-8Q3LI54 63 aa10.25□□□□□ -0.77
SHISA5-201ENST00000296444 FSIP2Q5CZC0 6907 aa10.13□□□□□ -0.79
SHISA5-201ENST00000296444 KRTAP23-1A1A580 65 aa10.02□□□□□ -0.8
SHISA5-201ENST00000296444 MT1XP80297 61 aa9.98□□□□□ -0.81
SHISA5-201ENST00000296444 KRTAP10-5P60370 271 aa9.97□□□□□ -0.81
SHISA5-201ENST00000296444 SSPOA2VEC9 5147 aa9.93□□□□□ -0.82
SHISA5-201ENST00000296444 SPRR5A0A1B0GTR4 108 aa9.89□□□□□ -0.83
SHISA5-201ENST00000296444 TNP1P09430 55 aa9.88□□□□□ -0.83
SHISA5-201ENST00000296444 KMT2DO14686 5537 aa9.79□□□□□ -0.84
SHISA5-201ENST00000296444 KRTAP10-7P60409 375 aaPredicted RBP9.68□□□□□ -0.86
SHISA5-201ENST00000296444 LCE3AQ5TA76 89 aa9.54□□□□□ -0.88
SHISA5-201ENST00000296444 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
SHISA5-201ENST00000296444 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
SHISA5-201ENST00000296444 FCGBPQ9Y6R7 5405 aaPredicted RBP9.42□□□□□ -0.9
SHISA5-201ENST00000296444 KRTAP4-8A0A0G2JLE6 195 aa9.38□□□□□ -0.91
SHISA5-201ENST00000296444 KRTAP10-12P60413 245 aa9.38□□□□□ -0.91
SHISA5-201ENST00000296444 KRTAP4-8Q9BYQ9 185 aa9.38□□□□□ -0.91
SHISA5-201ENST00000296444 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
SHISA5-201ENST00000296444 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
SHISA5-201ENST00000296444 INE1O15225 51 aa9.2□□□□□ -0.94
SHISA5-201ENST00000296444 KRTAP8-1Q8IUC2 63 aa9.17□□□□□ -0.94
SHISA5-201ENST00000296444 KRTAP19-5Q3LI72 72 aa9.07□□□□□ -0.96
SHISA5-201ENST00000296444 KRTAP12-3P60328 96 aa9.05□□□□□ -0.96
SHISA5-201ENST00000296444 MACF1Q9UPN3 7388 aaKnown RBP8.95□□□□□ -0.98
SHISA5-201ENST00000296444 MUC12Q9UKN1 5478 aa8.94□□□□□ -0.98
SHISA5-201ENST00000296444 KRTAP19-7Q3SYF9 63 aa8.92□□□□□ -0.98
SHISA5-201ENST00000296444 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
SHISA5-201ENST00000296444 SYNE2Q8WXH0 6885 aaKnown RBP8.83□□□□□ -1
SHISA5-201ENST00000296444 MT1EP04732 61 aa8.68□□□□□ -1.02
SHISA5-201ENST00000296444 KRTAP4-7Q9BYR0 210 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms