RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 UQCR11O14957 56 aa6.75□□□□□ -1.33
PPP1CB-201ENST00000296122 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
PPP1CB-201ENST00000296122 HERC2O95714 4834 aa6.74□□□□□ -1.33
PPP1CB-201ENST00000296122 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
PPP1CB-201ENST00000296122 LCA10Q71F78 164 aa6.67□□□□□ -1.34
PPP1CB-201ENST00000296122 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
PPP1CB-201ENST00000296122 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
PPP1CB-201ENST00000296122 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
PPP1CB-201ENST00000296122 A0A1B0GU33 70 aa6.64□□□□□ -1.35
PPP1CB-201ENST00000296122 PMAIP1Q13794 54 aa6.6□□□□□ -1.35
PPP1CB-201ENST00000296122 K7ERS5 55 aa6.58□□□□□ -1.36
PPP1CB-201ENST00000296122 LRP2P98164 4655 aa6.53□□□□□ -1.36
PPP1CB-201ENST00000296122 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
PPP1CB-201ENST00000296122 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
PPP1CB-201ENST00000296122 A8MU10 97 aa6.49□□□□□ -1.37
PPP1CB-201ENST00000296122 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
PPP1CB-201ENST00000296122 LPAP08519 4548 aa6.46□□□□□ -1.38
PPP1CB-201ENST00000296122 A0A0D9SG42 100 aa6.43□□□□□ -1.38
PPP1CB-201ENST00000296122 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
PPP1CB-201ENST00000296122 M0R2T5 61 aa6.42□□□□□ -1.38
PPP1CB-201ENST00000296122 R4GN34 69 aa6.38□□□□□ -1.39
PPP1CB-201ENST00000296122 P0C880 135 aa6.38□□□□□ -1.39
PPP1CB-201ENST00000296122 H0YAA0 97 aa6.37□□□□□ -1.39
PPP1CB-201ENST00000296122 PCLOQ9Y6V0 5065 aa6.36□□□□□ -1.39
PPP1CB-201ENST00000296122 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
PPP1CB-201ENST00000296122 M0QZ58 72 aa6.34□□□□□ -1.39
PPP1CB-201ENST00000296122 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
PPP1CB-201ENST00000296122 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
PPP1CB-201ENST00000296122 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
PPP1CB-201ENST00000296122 HERC1Q15751 4861 aa6.29□□□□□ -1.4
PPP1CB-201ENST00000296122 A6NN06 94 aa6.26□□□□□ -1.41
PPP1CB-201ENST00000296122 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
PPP1CB-201ENST00000296122 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
PPP1CB-201ENST00000296122 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
PPP1CB-201ENST00000296122 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
PPP1CB-201ENST00000296122 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
PPP1CB-201ENST00000296122 MUC17Q685J3 4493 aa6.11□□□□□ -1.43
PPP1CB-201ENST00000296122 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
PPP1CB-201ENST00000296122 ROMO1P60602 79 aa6.08□□□□□ -1.44
PPP1CB-201ENST00000296122 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
PPP1CB-201ENST00000296122 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
PPP1CB-201ENST00000296122 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
PPP1CB-201ENST00000296122 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
PPP1CB-201ENST00000296122 MT1HP80294 61 aa6.02□□□□□ -1.45
PPP1CB-201ENST00000296122 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
PPP1CB-201ENST00000296122 MUC2Q02817 5179 aa6.01□□□□□ -1.45
PPP1CB-201ENST00000296122 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
PPP1CB-201ENST00000296122 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
PPP1CB-201ENST00000296122 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
PPP1CB-201ENST00000296122 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
PPP1CB-201ENST00000296122 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
PPP1CB-201ENST00000296122 H3BS24 57 aa5.86□□□□□ -1.47
PPP1CB-201ENST00000296122 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
PPP1CB-201ENST00000296122 MT2AP02795 61 aa5.83□□□□□ -1.48
PPP1CB-201ENST00000296122 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
PPP1CB-201ENST00000296122 MT1FP04733 61 aa5.78□□□□□ -1.48
PPP1CB-201ENST00000296122 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
PPP1CB-201ENST00000296122 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
PPP1CB-201ENST00000296122 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
PPP1CB-201ENST00000296122 TNP1P09430 55 aa5.73□□□□□ -1.49
PPP1CB-201ENST00000296122 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
PPP1CB-201ENST00000296122 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
PPP1CB-201ENST00000296122 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
PPP1CB-201ENST00000296122 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
PPP1CB-201ENST00000296122 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
PPP1CB-201ENST00000296122 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
PPP1CB-201ENST00000296122 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
PPP1CB-201ENST00000296122 MT1BP07438 61 aa5.47□□□□□ -1.53
PPP1CB-201ENST00000296122 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
PPP1CB-201ENST00000296122 LCE2BO14633 110 aa5.36□□□□□ -1.55
PPP1CB-201ENST00000296122 MT1XP80297 61 aa5.33□□□□□ -1.56
PPP1CB-201ENST00000296122 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
PPP1CB-201ENST00000296122 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
PPP1CB-201ENST00000296122 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
PPP1CB-201ENST00000296122 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
PPP1CB-201ENST00000296122 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
PPP1CB-201ENST00000296122 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
PPP1CB-201ENST00000296122 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
PPP1CB-201ENST00000296122 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
PPP1CB-201ENST00000296122 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
PPP1CB-201ENST00000296122 USH2AO75445 5202 aa5.07□□□□□ -1.6
PPP1CB-201ENST00000296122 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
PPP1CB-201ENST00000296122 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
PPP1CB-201ENST00000296122 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
PPP1CB-201ENST00000296122 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
PPP1CB-201ENST00000296122 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
PPP1CB-201ENST00000296122 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
PPP1CB-201ENST00000296122 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
PPP1CB-201ENST00000296122 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
PPP1CB-201ENST00000296122 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
PPP1CB-201ENST00000296122 KMT2DO14686 5537 aa4.72□□□□□ -1.65
PPP1CB-201ENST00000296122 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
PPP1CB-201ENST00000296122 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
PPP1CB-201ENST00000296122 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
PPP1CB-201ENST00000296122 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
PPP1CB-201ENST00000296122 MT1EP04732 61 aa4.69□□□□□ -1.66
PPP1CB-201ENST00000296122 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
PPP1CB-201ENST00000296122 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
PPP1CB-201ENST00000296122 MT1LQ93083 61 aa4.63□□□□□ -1.67
PPP1CB-201ENST00000296122 MT1GP13640 62 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms