RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 NDUFC1O43677 76 aa13.31□□□□□ -0.28
CHCHD4-201ENST00000295767 H7BZZ5 65 aa13.29□□□□□ -0.28
CHCHD4-201ENST00000295767 KRTAP3-3Q9BYR6 98 aa13.28□□□□□ -0.28
CHCHD4-201ENST00000295767 ACYP2P14621 99 aa13.22□□□□□ -0.29
CHCHD4-201ENST00000295767 CSAG1Q6PB30 78 aa13.21□□□□□ -0.29
CHCHD4-201ENST00000295767 KRTAP9-8Q9BYQ0 159 aa13.21□□□□□ -0.29
CHCHD4-201ENST00000295767 MT2AP02795 61 aa13.12□□□□□ -0.31
CHCHD4-201ENST00000295767 MT1FP04733 61 aa13.03□□□□□ -0.32
CHCHD4-201ENST00000295767 CHKB-CPT1BH3BT56 60 aa12.99□□□□□ -0.33
CHCHD4-201ENST00000295767 TMEM258P61165 79 aa12.98□□□□□ -0.33
CHCHD4-201ENST00000295767 KRTAP10-10P60014 251 aa12.97□□□□□ -0.33
CHCHD4-201ENST00000295767 COA5Q86WW8 74 aa12.94□□□□□ -0.34
CHCHD4-201ENST00000295767 SPTSSBQ8NFR3 76 aa12.88□□□□□ -0.35
CHCHD4-201ENST00000295767 ATP5EP56381 51 aaPredicted RBP12.87□□□□□ -0.35
CHCHD4-201ENST00000295767 H0YAA0 97 aa12.84□□□□□ -0.35
CHCHD4-201ENST00000295767 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
CHCHD4-201ENST00000295767 KRTAP9-3Q9BYQ3 159 aa12.77□□□□□ -0.37
CHCHD4-201ENST00000295767 ADM2Q7Z4H4 148 aa12.76□□□□□ -0.37
CHCHD4-201ENST00000295767 KRTAP9-2Q9BYQ4 174 aa12.71□□□□□ -0.37
CHCHD4-201ENST00000295767 RPS28P62857 69 aaKnown RBP12.63□□□□□ -0.39
CHCHD4-201ENST00000295767 KRTAP3-2Q9BYR7 98 aa12.62□□□□□ -0.39
CHCHD4-201ENST00000295767 P0C880 135 aa12.6□□□□□ -0.39
CHCHD4-201ENST00000295767 SERP1Q9Y6X1 66 aa12.58□□□□□ -0.4
CHCHD4-201ENST00000295767 LCE2BO14633 110 aa12.55□□□□□ -0.4
CHCHD4-201ENST00000295767 CRIPTQ9P021 101 aa12.53□□□□□ -0.4
CHCHD4-201ENST00000295767 KRTAP19-1Q8IUB9 90 aa12.52□□□□□ -0.4
CHCHD4-201ENST00000295767 SPRR2GQ9BYE4 73 aa12.48□□□□□ -0.41
CHCHD4-201ENST00000295767 SEC61GP60059 68 aa12.36□□□□□ -0.43
CHCHD4-201ENST00000295767 R4GN34 69 aa12.35□□□□□ -0.43
CHCHD4-201ENST00000295767 USH2AO75445 5202 aa12.34□□□□□ -0.43
CHCHD4-201ENST00000295767 M0QZ58 72 aa12.31□□□□□ -0.44
CHCHD4-201ENST00000295767 SMIM26A0A096LP01 95 aa12.26□□□□□ -0.45
CHCHD4-201ENST00000295767 KRTAP19-8Q3LI54 63 aa12.26□□□□□ -0.45
CHCHD4-201ENST00000295767 A0A1B0GU69 56 aa12.25□□□□□ -0.45
CHCHD4-201ENST00000295767 FSIP2Q5CZC0 6907 aa12.25□□□□□ -0.45
CHCHD4-201ENST00000295767 LINC01558Q9Y6Z2 57 aa12.2□□□□□ -0.46
CHCHD4-201ENST00000295767 MT1BP07438 61 aa12.18□□□□□ -0.46
CHCHD4-201ENST00000295767 Q5VV11 94 aa12.18□□□□□ -0.46
CHCHD4-201ENST00000295767 CRCT1Q9UGL9 99 aa12.13□□□□□ -0.47
CHCHD4-201ENST00000295767 KRTAP13-4Q3LI77 160 aa12.12□□□□□ -0.47
CHCHD4-201ENST00000295767 LINC01554Q52M75 96 aa12.1□□□□□ -0.47
CHCHD4-201ENST00000295767 A0A1B0GU33 70 aa12.09□□□□□ -0.47
CHCHD4-201ENST00000295767 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
CHCHD4-201ENST00000295767 SSPOA2VEC9 5147 aa12.05□□□□□ -0.48
CHCHD4-201ENST00000295767 Q1T7F1 81 aa12□□□□□ -0.49
CHCHD4-201ENST00000295767 KRTAP9-6A0A140TA67 174 aa11.99□□□□□ -0.49
CHCHD4-201ENST00000295767 SPATA8Q6RVD6 105 aa11.97□□□□□ -0.49
CHCHD4-201ENST00000295767 V9GYY9 64 aa11.97□□□□□ -0.49
CHCHD4-201ENST00000295767 KRTAP19-6Q3LI70 58 aa11.93□□□□□ -0.5
CHCHD4-201ENST00000295767 PLAC4Q8WY50 150 aa11.88□□□□□ -0.51
CHCHD4-201ENST00000295767 A6NN06 94 aa11.82□□□□□ -0.52
CHCHD4-201ENST00000295767 PSPHP1O15172 72 aa11.82□□□□□ -0.52
CHCHD4-201ENST00000295767 A0A0D9SG42 100 aa11.82□□□□□ -0.52
CHCHD4-201ENST00000295767 UQCR11O14957 56 aa11.73□□□□□ -0.53
CHCHD4-201ENST00000295767 A8MU10 97 aa11.7□□□□□ -0.54
CHCHD4-201ENST00000295767 KRTAP10-5P60370 271 aa11.7□□□□□ -0.54
CHCHD4-201ENST00000295767 FCGBPQ9Y6R7 5405 aaPredicted RBP11.69□□□□□ -0.54
CHCHD4-201ENST00000295767 MT1XP80297 61 aa11.61□□□□□ -0.55
CHCHD4-201ENST00000295767 KRTAP12-1P59990 96 aa11.6□□□□□ -0.55
CHCHD4-201ENST00000295767 SPINT4Q6UDR6 99 aa11.58□□□□□ -0.56
CHCHD4-201ENST00000295767 MIR22HGQ0VDD5 57 aa11.55□□□□□ -0.56
CHCHD4-201ENST00000295767 PRO2289Q9P1D8 64 aa11.55□□□□□ -0.56
CHCHD4-201ENST00000295767 KRTAP12-2P59991 146 aa11.54□□□□□ -0.56
CHCHD4-201ENST00000295767 CAMK2N1Q7Z7J9 78 aa11.48□□□□□ -0.57
CHCHD4-201ENST00000295767 A6NED7 52 aa11.46□□□□□ -0.58
CHCHD4-201ENST00000295767 BRK1Q8WUW1 75 aa11.35□□□□□ -0.59
CHCHD4-201ENST00000295767 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.27□□□□□ -0.6
CHCHD4-201ENST00000295767 CDC42SE1Q9NRR8 79 aa11.24□□□□□ -0.61
CHCHD4-201ENST00000295767 PRO0628Q9UI54 55 aa11.24□□□□□ -0.61
CHCHD4-201ENST00000295767 MACF1Q9UPN3 7388 aaKnown RBP11.16□□□□□ -0.62
CHCHD4-201ENST00000295767 K7ERS5 55 aa11.13□□□□□ -0.63
CHCHD4-201ENST00000295767 KRTAP10-7P60409 375 aaPredicted RBP11.12□□□□□ -0.63
CHCHD4-201ENST00000295767 KRTAP10-12P60413 245 aa11.02□□□□□ -0.64
CHCHD4-201ENST00000295767 C10orf95Q9H7T3 257 aa11.02□□□□□ -0.64
CHCHD4-201ENST00000295767 SYNE2Q8WXH0 6885 aaKnown RBP10.9□□□□□ -0.66
CHCHD4-201ENST00000295767 KMT2DO14686 5537 aa10.89□□□□□ -0.67
CHCHD4-201ENST00000295767 KRTAP9-7A8MTY7 169 aa10.88□□□□□ -0.67
CHCHD4-201ENST00000295767 KRTAP4-8A0A0G2JLE6 195 aa10.87□□□□□ -0.67
CHCHD4-201ENST00000295767 KRTAP4-8Q9BYQ9 185 aa10.87□□□□□ -0.67
CHCHD4-201ENST00000295767 TNP1P09430 55 aa10.79□□□□□ -0.68
CHCHD4-201ENST00000295767 KRTAP6-3Q3LI67 103 aa10.78□□□□□ -0.68
CHCHD4-201ENST00000295767 KRTAP8-1Q8IUC2 63 aa10.76□□□□□ -0.69
CHCHD4-201ENST00000295767 PMAIP1Q13794 54 aa10.74□□□□□ -0.69
CHCHD4-201ENST00000295767 SVIPQ8NHG7 77 aa10.68□□□□□ -0.7
CHCHD4-201ENST00000295767 KRTAP5-9P26371 169 aa10.65□□□□□ -0.7
CHCHD4-201ENST00000295767 KRTAP25-1Q3LHN0 102 aa10.59□□□□□ -0.71
CHCHD4-201ENST00000295767 ROMO1P60602 79 aa10.57□□□□□ -0.72
CHCHD4-201ENST00000295767 SPRR2FQ96RM1 72 aa10.55□□□□□ -0.72
CHCHD4-201ENST00000295767 LCE3AQ5TA76 89 aa10.51□□□□□ -0.73
CHCHD4-201ENST00000295767 KTN1-AS1Q86SY8 53 aa10.38□□□□□ -0.75
CHCHD4-201ENST00000295767 KRTAP19-7Q3SYF9 63 aa10.37□□□□□ -0.75
CHCHD4-201ENST00000295767 MUC12Q9UKN1 5478 aa10.36□□□□□ -0.75
CHCHD4-201ENST00000295767 KRTAP19-5Q3LI72 72 aa10.33□□□□□ -0.76
CHCHD4-201ENST00000295767 MT1EP04732 61 aa10.23□□□□□ -0.77
CHCHD4-201ENST00000295767 KRTAP23-1A1A580 65 aa10.22□□□□□ -0.77
CHCHD4-201ENST00000295767 MDN1Q9NU22 5596 aa10.2□□□□□ -0.78
CHCHD4-201ENST00000295767 SPRR2EP22531 72 aa10.19□□□□□ -0.78
CHCHD4-201ENST00000295767 SPRR2BP35325 72 aa10.19□□□□□ -0.78
CHCHD4-201ENST00000295767 SPRR2AP35326 72 aa10.19□□□□□ -0.78
CHCHD4-201ENST00000295767 LCE1AQ5T7P2 110 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms