RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
CCDC78-201ENST00000293889 LCA10Q71F78 164 aa9.28□□□□□ -0.92
CCDC78-201ENST00000293889 CDC42SE1Q9NRR8 79 aa9.28□□□□□ -0.92
CCDC78-201ENST00000293889 A6NED7 52 aa9.26□□□□□ -0.93
CCDC78-201ENST00000293889 A8MU10 97 aa9.24□□□□□ -0.93
CCDC78-201ENST00000293889 SPINK7P58062 85 aa9.23□□□□□ -0.93
CCDC78-201ENST00000293889 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.93
CCDC78-201ENST00000293889 PMAIP1Q13794 54 aa9.2□□□□□ -0.94
CCDC78-201ENST00000293889 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
CCDC78-201ENST00000293889 A6NN06 94 aa9.1□□□□□ -0.95
CCDC78-201ENST00000293889 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
CCDC78-201ENST00000293889 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
CCDC78-201ENST00000293889 A0A1B0GU69 56 aa9.04□□□□□ -0.96
CCDC78-201ENST00000293889 KTN1-AS1Q86SY8 53 aa9.03□□□□□ -0.96
CCDC78-201ENST00000293889 KRTAP19-2Q3LHN2 52 aa9.02□□□□□ -0.96
CCDC78-201ENST00000293889 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
CCDC78-201ENST00000293889 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
CCDC78-201ENST00000293889 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
CCDC78-201ENST00000293889 LCE2AQ5TA79 106 aaPredicted RBP8.94□□□□□ -0.98
CCDC78-201ENST00000293889 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
CCDC78-201ENST00000293889 UQCR11O14957 56 aa8.91□□□□□ -0.98
CCDC78-201ENST00000293889 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
CCDC78-201ENST00000293889 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
CCDC78-201ENST00000293889 SEC61GP60059 68 aa8.86□□□□□ -0.99
CCDC78-201ENST00000293889 MT1HP80294 61 aa8.82□□□□□ -1
CCDC78-201ENST00000293889 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
CCDC78-201ENST00000293889 FLGP20930 4061 aaPredicted RBP8.81□□□□□ -1
CCDC78-201ENST00000293889 S4R3F8 94 aa8.67□□□□□ -1.02
CCDC78-201ENST00000293889 M0R2T5 61 aa8.64□□□□□ -1.03
CCDC78-201ENST00000293889 H0YAA0 97 aa8.59□□□□□ -1.03
CCDC78-201ENST00000293889 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
CCDC78-201ENST00000293889 A0A1B0GU33 70 aa8.58□□□□□ -1.04
CCDC78-201ENST00000293889 KRTAP10-6P60371 365 aaPredicted RBP8.58□□□□□ -1.04
CCDC78-201ENST00000293889 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
CCDC78-201ENST00000293889 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
CCDC78-201ENST00000293889 PRAC1Q96KF2 57 aa8.51□□□□□ -1.05
CCDC78-201ENST00000293889 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
CCDC78-201ENST00000293889 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
CCDC78-201ENST00000293889 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
CCDC78-201ENST00000293889 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
CCDC78-201ENST00000293889 MT2AP02795 61 aa8.32□□□□□ -1.08
CCDC78-201ENST00000293889 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
CCDC78-201ENST00000293889 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
CCDC78-201ENST00000293889 K7ERS5 55 aa8.3□□□□□ -1.08
CCDC78-201ENST00000293889 MT1FP04733 61 aa8.27□□□□□ -1.09
CCDC78-201ENST00000293889 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
CCDC78-201ENST00000293889 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.1
CCDC78-201ENST00000293889 KRTAP13-4Q3LI77 160 aa8.21□□□□□ -1.1
CCDC78-201ENST00000293889 P0C880 135 aa8.16□□□□□ -1.1
CCDC78-201ENST00000293889 ROMO1P60602 79 aa8.13□□□□□ -1.11
CCDC78-201ENST00000293889 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
CCDC78-201ENST00000293889 FSIP2Q5CZC0 6907 aa8.06□□□□□ -1.12
CCDC78-201ENST00000293889 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
CCDC78-201ENST00000293889 M0QZ58 72 aa8.03□□□□□ -1.12
CCDC78-201ENST00000293889 LCE2BO14633 110 aa8.03□□□□□ -1.12
CCDC78-201ENST00000293889 A0A0D9SG42 100 aa8.02□□□□□ -1.13
CCDC78-201ENST00000293889 KRTAP19-1Q8IUB9 90 aa8□□□□□ -1.13
CCDC78-201ENST00000293889 SPRR2GQ9BYE4 73 aa7.97□□□□□ -1.13
CCDC78-201ENST00000293889 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
CCDC78-201ENST00000293889 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.13
CCDC78-201ENST00000293889 R4GN34 69 aa7.96□□□□□ -1.13
CCDC78-201ENST00000293889 USH2AO75445 5202 aa7.96□□□□□ -1.14
CCDC78-201ENST00000293889 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
CCDC78-201ENST00000293889 KRTAP12-2P59991 146 aa7.93□□□□□ -1.14
CCDC78-201ENST00000293889 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
CCDC78-201ENST00000293889 SSPOA2VEC9 5147 aa7.81□□□□□ -1.16
CCDC78-201ENST00000293889 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
CCDC78-201ENST00000293889 MT1BP07438 61 aa7.75□□□□□ -1.17
CCDC78-201ENST00000293889 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
CCDC78-201ENST00000293889 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
CCDC78-201ENST00000293889 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
CCDC78-201ENST00000293889 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
CCDC78-201ENST00000293889 KRTAP15-1Q3LI76 137 aa7.49□□□□□ -1.21
CCDC78-201ENST00000293889 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
CCDC78-201ENST00000293889 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
CCDC78-201ENST00000293889 MT1XP80297 61 aa7.42□□□□□ -1.22
CCDC78-201ENST00000293889 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
CCDC78-201ENST00000293889 H3BS24 57 aa7.36□□□□□ -1.23
CCDC78-201ENST00000293889 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
CCDC78-201ENST00000293889 MACF1Q9UPN3 7388 aaKnown RBP7.33□□□□□ -1.24
CCDC78-201ENST00000293889 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
CCDC78-201ENST00000293889 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
CCDC78-201ENST00000293889 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
CCDC78-201ENST00000293889 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
CCDC78-201ENST00000293889 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
CCDC78-201ENST00000293889 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
CCDC78-201ENST00000293889 TNP1P09430 55 aa7.09□□□□□ -1.27
CCDC78-201ENST00000293889 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
CCDC78-201ENST00000293889 KRTAP6-3Q3LI67 103 aa7.02□□□□□ -1.29
CCDC78-201ENST00000293889 KMT2DO14686 5537 aa6.97□□□□□ -1.29
CCDC78-201ENST00000293889 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
CCDC78-201ENST00000293889 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
CCDC78-201ENST00000293889 KRTAP5-9P26371 169 aa6.87□□□□□ -1.31
CCDC78-201ENST00000293889 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
CCDC78-201ENST00000293889 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
CCDC78-201ENST00000293889 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
CCDC78-201ENST00000293889 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
CCDC78-201ENST00000293889 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
CCDC78-201ENST00000293889 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
CCDC78-201ENST00000293889 NEBP20929 6669 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms