RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 LRP2P98164 4655 aa10.97□□□□□ -0.65
SNRNP25-201ENST00000293861 LCA10Q71F78 164 aa10.95□□□□□ -0.66
SNRNP25-201ENST00000293861 CDC42SE1Q9NRR8 79 aa10.95□□□□□ -0.66
SNRNP25-201ENST00000293861 LPAP08519 4548 aa10.94□□□□□ -0.66
SNRNP25-201ENST00000293861 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
SNRNP25-201ENST00000293861 A8MU10 97 aa10.91□□□□□ -0.66
SNRNP25-201ENST00000293861 SEC61GP60059 68 aa10.9□□□□□ -0.67
SNRNP25-201ENST00000293861 HERC1Q15751 4861 aa10.86□□□□□ -0.67
SNRNP25-201ENST00000293861 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
SNRNP25-201ENST00000293861 UQCR11O14957 56 aa10.82□□□□□ -0.68
SNRNP25-201ENST00000293861 RBM12B-AS1Q9P1G2 102 aa10.82□□□□□ -0.68
SNRNP25-201ENST00000293861 H1FX-AS1Q4G0G2 97 aa10.82□□□□□ -0.68
SNRNP25-201ENST00000293861 S4R3F8 94 aa10.82□□□□□ -0.68
SNRNP25-201ENST00000293861 SPATA8Q6RVD6 105 aa10.78□□□□□ -0.68
SNRNP25-201ENST00000293861 MIR22HGQ0VDD5 57 aa10.72□□□□□ -0.69
SNRNP25-201ENST00000293861 KRTAP4-1Q9BYQ7 146 aa10.65□□□□□ -0.7
SNRNP25-201ENST00000293861 HMCN2Q8NDA2 5059 aa10.64□□□□□ -0.71
SNRNP25-201ENST00000293861 A0A1B0GU33 70 aa10.64□□□□□ -0.71
SNRNP25-201ENST00000293861 MUC17Q685J3 4493 aa10.63□□□□□ -0.71
SNRNP25-201ENST00000293861 PMAIP1Q13794 54 aa10.6□□□□□ -0.71
SNRNP25-201ENST00000293861 KRTAP10-6P60371 365 aaPredicted RBP10.56□□□□□ -0.72
SNRNP25-201ENST00000293861 H0YAA0 97 aa10.54□□□□□ -0.72
SNRNP25-201ENST00000293861 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
SNRNP25-201ENST00000293861 A6NN06 94 aa10.53□□□□□ -0.72
SNRNP25-201ENST00000293861 CSAG1Q6PB30 78 aa10.53□□□□□ -0.72
SNRNP25-201ENST00000293861 KRTAP19-2Q3LHN2 52 aa10.44□□□□□ -0.74
SNRNP25-201ENST00000293861 P0C880 135 aa10.39□□□□□ -0.75
SNRNP25-201ENST00000293861 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
SNRNP25-201ENST00000293861 KRTAP13-4Q3LI77 160 aa10.31□□□□□ -0.76
SNRNP25-201ENST00000293861 KTN1-AS1Q86SY8 53 aa10.29□□□□□ -0.76
SNRNP25-201ENST00000293861 UBR4Q5T4S7 5183 aa10.26□□□□□ -0.77
SNRNP25-201ENST00000293861 MUC2Q02817 5179 aa10.19□□□□□ -0.78
SNRNP25-201ENST00000293861 M0QZ58 72 aa10.17□□□□□ -0.78
SNRNP25-201ENST00000293861 K7ERS5 55 aa10.15□□□□□ -0.78
SNRNP25-201ENST00000293861 FLGP20930 4061 aaPredicted RBP10.12□□□□□ -0.79
SNRNP25-201ENST00000293861 A0A0D9SG42 100 aa10.1□□□□□ -0.79
SNRNP25-201ENST00000293861 RNF213Q63HN8 5207 aa10.09□□□□□ -0.79
SNRNP25-201ENST00000293861 LCE2CQ5TA81 110 aa10.07□□□□□ -0.8
SNRNP25-201ENST00000293861 R4GN34 69 aa9.98□□□□□ -0.81
SNRNP25-201ENST00000293861 KRTAP12-1P59990 96 aa9.94□□□□□ -0.82
SNRNP25-201ENST00000293861 LORP23490 312 aaPredicted RBP9.94□□□□□ -0.82
SNRNP25-201ENST00000293861 KRTAP12-2P59991 146 aa9.92□□□□□ -0.82
SNRNP25-201ENST00000293861 PRAC1Q96KF2 57 aa9.89□□□□□ -0.83
SNRNP25-201ENST00000293861 MT1HP80294 61 aa9.85□□□□□ -0.83
SNRNP25-201ENST00000293861 SPINT4Q6UDR6 99 aa9.85□□□□□ -0.83
SNRNP25-201ENST00000293861 ROMO1P60602 79 aa9.82□□□□□ -0.84
SNRNP25-201ENST00000293861 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
SNRNP25-201ENST00000293861 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
SNRNP25-201ENST00000293861 M0R2T5 61 aa9.78□□□□□ -0.84
SNRNP25-201ENST00000293861 FAT4Q6V0I7 4981 aa9.77□□□□□ -0.85
SNRNP25-201ENST00000293861 KRTAP25-1Q3LHN0 102 aa9.6□□□□□ -0.87
SNRNP25-201ENST00000293861 MT2AP02795 61 aa9.53□□□□□ -0.88
SNRNP25-201ENST00000293861 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
SNRNP25-201ENST00000293861 SPRR2GQ9BYE4 73 aa9.5□□□□□ -0.89
SNRNP25-201ENST00000293861 MT1FP04733 61 aa9.48□□□□□ -0.89
SNRNP25-201ENST00000293861 KRTAP10-10P60014 251 aa9.46□□□□□ -0.89
SNRNP25-201ENST00000293861 KRTAP19-1Q8IUB9 90 aa9.43□□□□□ -0.9
SNRNP25-201ENST00000293861 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
SNRNP25-201ENST00000293861 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
SNRNP25-201ENST00000293861 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
SNRNP25-201ENST00000293861 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
SNRNP25-201ENST00000293861 KRTAP19-8Q3LI54 63 aa9.21□□□□□ -0.94
SNRNP25-201ENST00000293861 KRTAP9-3Q9BYQ3 159 aa9.18□□□□□ -0.94
SNRNP25-201ENST00000293861 MT1BP07438 61 aa9.04□□□□□ -0.96
SNRNP25-201ENST00000293861 TNP1P09430 55 aa9.01□□□□□ -0.97
SNRNP25-201ENST00000293861 PP632Q6XCG6 107 aa8.98□□□□□ -0.97
SNRNP25-201ENST00000293861 KRTAP23-1A1A580 65 aa8.9□□□□□ -0.98
SNRNP25-201ENST00000293861 LCE2BO14633 110 aa8.86□□□□□ -0.99
SNRNP25-201ENST00000293861 KRTAP10-5P60370 271 aa8.82□□□□□ -1
SNRNP25-201ENST00000293861 MT1XP80297 61 aa8.82□□□□□ -1
SNRNP25-201ENST00000293861 PRO2289Q9P1D8 64 aa8.7□□□□□ -1.02
SNRNP25-201ENST00000293861 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
SNRNP25-201ENST00000293861 LCE3AQ5TA76 89 aa8.56□□□□□ -1.04
SNRNP25-201ENST00000293861 USH2AO75445 5202 aa8.55□□□□□ -1.04
SNRNP25-201ENST00000293861 KRTAP10-7P60409 375 aaPredicted RBP8.48□□□□□ -1.05
SNRNP25-201ENST00000293861 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
SNRNP25-201ENST00000293861 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
SNRNP25-201ENST00000293861 FSIP2Q5CZC0 6907 aa8.45□□□□□ -1.06
SNRNP25-201ENST00000293861 KRTAP8-1Q8IUC2 63 aa8.44□□□□□ -1.06
SNRNP25-201ENST00000293861 SSPOA2VEC9 5147 aa8.32□□□□□ -1.08
SNRNP25-201ENST00000293861 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
SNRNP25-201ENST00000293861 KRTAP19-6Q3LI70 58 aa8.28□□□□□ -1.08
SNRNP25-201ENST00000293861 KRTAP12-3P60328 96 aa8.21□□□□□ -1.09
SNRNP25-201ENST00000293861 SPRR5A0A1B0GTR4 108 aa8.14□□□□□ -1.11
SNRNP25-201ENST00000293861 NDUFAF8A1L188 74 aa8.06□□□□□ -1.12
SNRNP25-201ENST00000293861 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
SNRNP25-201ENST00000293861 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
SNRNP25-201ENST00000293861 KRTAP19-5Q3LI72 72 aa8.03□□□□□ -1.12
SNRNP25-201ENST00000293861 FCGBPQ9Y6R7 5405 aaPredicted RBP7.98□□□□□ -1.13
SNRNP25-201ENST00000293861 LUZP6Q538Z0 58 aa7.97□□□□□ -1.13
SNRNP25-201ENST00000293861 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.13
SNRNP25-201ENST00000293861 KMT2DO14686 5537 aa7.93□□□□□ -1.14
SNRNP25-201ENST00000293861 KRTAP19-7Q3SYF9 63 aa7.88□□□□□ -1.15
SNRNP25-201ENST00000293861 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
SNRNP25-201ENST00000293861 LCE3CQ5T5A8 94 aa7.72□□□□□ -1.17
SNRNP25-201ENST00000293861 MT1EP04732 61 aa7.7□□□□□ -1.18
SNRNP25-201ENST00000293861 KRTAP19-4Q3LI73 84 aa7.7□□□□□ -1.18
SNRNP25-201ENST00000293861 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
SNRNP25-201ENST00000293861 H3BS24 57 aa7.66□□□□□ -1.18
SNRNP25-201ENST00000293861 MT1LQ93083 61 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms