RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 HERC2O95714 4834 aa7.48□□□□□ -1.21
ABCF3-201ENST00000292808 XP32Q5T750 250 aa7.45□□□□□ -1.22
ABCF3-201ENST00000292808 A6NN06 94 aa7.42□□□□□ -1.22
ABCF3-201ENST00000292808 RPL37P61927 97 aaKnown RBP7.41□□□□□ -1.22
ABCF3-201ENST00000292808 A0A0A0MQY5 61 aa7.4□□□□□ -1.23
ABCF3-201ENST00000292808 SPATA8Q6RVD6 105 aa7.39□□□□□ -1.23
ABCF3-201ENST00000292808 KRTAP3-1Q9BYR8 98 aa7.37□□□□□ -1.23
ABCF3-201ENST00000292808 UQCR11O14957 56 aa7.37□□□□□ -1.23
ABCF3-201ENST00000292808 TPRXLQ17RH7 258 aa7.33□□□□□ -1.24
ABCF3-201ENST00000292808 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
ABCF3-201ENST00000292808 LPAP08519 4548 aa7.3□□□□□ -1.24
ABCF3-201ENST00000292808 LRP2P98164 4655 aa7.3□□□□□ -1.24
ABCF3-201ENST00000292808 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
ABCF3-201ENST00000292808 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
ABCF3-201ENST00000292808 A0A1B0GU33 70 aa7.13□□□□□ -1.27
ABCF3-201ENST00000292808 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
ABCF3-201ENST00000292808 H0YAA0 97 aa7.12□□□□□ -1.27
ABCF3-201ENST00000292808 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
ABCF3-201ENST00000292808 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
ABCF3-201ENST00000292808 S4R3F8 94 aa7.06□□□□□ -1.28
ABCF3-201ENST00000292808 HERC1Q15751 4861 aa7.04□□□□□ -1.28
ABCF3-201ENST00000292808 KRTAP4-1Q9BYQ7 146 aa7.04□□□□□ -1.28
ABCF3-201ENST00000292808 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
ABCF3-201ENST00000292808 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
ABCF3-201ENST00000292808 PRAC1Q96KF2 57 aa7.02□□□□□ -1.29
ABCF3-201ENST00000292808 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
ABCF3-201ENST00000292808 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
ABCF3-201ENST00000292808 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
ABCF3-201ENST00000292808 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
ABCF3-201ENST00000292808 K7ERS5 55 aa6.88□□□□□ -1.31
ABCF3-201ENST00000292808 KRTAP19-2Q3LHN2 52 aa6.88□□□□□ -1.31
ABCF3-201ENST00000292808 P0C880 135 aa6.86□□□□□ -1.31
ABCF3-201ENST00000292808 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
ABCF3-201ENST00000292808 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
ABCF3-201ENST00000292808 MUC2Q02817 5179 aa6.81□□□□□ -1.32
ABCF3-201ENST00000292808 A0A0D9SG42 100 aa6.79□□□□□ -1.32
ABCF3-201ENST00000292808 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.33
ABCF3-201ENST00000292808 ROMO1P60602 79 aa6.7□□□□□ -1.34
ABCF3-201ENST00000292808 UBR4Q5T4S7 5183 aa6.7□□□□□ -1.34
ABCF3-201ENST00000292808 M0QZ58 72 aa6.68□□□□□ -1.34
ABCF3-201ENST00000292808 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
ABCF3-201ENST00000292808 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
ABCF3-201ENST00000292808 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
ABCF3-201ENST00000292808 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
ABCF3-201ENST00000292808 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
ABCF3-201ENST00000292808 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
ABCF3-201ENST00000292808 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
ABCF3-201ENST00000292808 CRIPTQ9P021 101 aa6.56□□□□□ -1.36
ABCF3-201ENST00000292808 FAT4Q6V0I7 4981 aa6.56□□□□□ -1.36
ABCF3-201ENST00000292808 R4GN34 69 aa6.54□□□□□ -1.36
ABCF3-201ENST00000292808 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
ABCF3-201ENST00000292808 MT1HP80294 61 aa6.45□□□□□ -1.38
ABCF3-201ENST00000292808 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
ABCF3-201ENST00000292808 M0R2T5 61 aa6.32□□□□□ -1.4
ABCF3-201ENST00000292808 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
ABCF3-201ENST00000292808 MT2AP02795 61 aa6.25□□□□□ -1.41
ABCF3-201ENST00000292808 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
ABCF3-201ENST00000292808 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
ABCF3-201ENST00000292808 MT1FP04733 61 aa6.23□□□□□ -1.41
ABCF3-201ENST00000292808 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
ABCF3-201ENST00000292808 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
ABCF3-201ENST00000292808 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
ABCF3-201ENST00000292808 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
ABCF3-201ENST00000292808 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
ABCF3-201ENST00000292808 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
ABCF3-201ENST00000292808 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
ABCF3-201ENST00000292808 LCE2BO14633 110 aa6.04□□□□□ -1.44
ABCF3-201ENST00000292808 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
ABCF3-201ENST00000292808 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
ABCF3-201ENST00000292808 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
ABCF3-201ENST00000292808 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
ABCF3-201ENST00000292808 MT1BP07438 61 aa5.94□□□□□ -1.46
ABCF3-201ENST00000292808 TNP1P09430 55 aa5.92□□□□□ -1.46
ABCF3-201ENST00000292808 MT1XP80297 61 aa5.79□□□□□ -1.48
ABCF3-201ENST00000292808 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
ABCF3-201ENST00000292808 USH2AO75445 5202 aa5.69□□□□□ -1.5
ABCF3-201ENST00000292808 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
ABCF3-201ENST00000292808 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
ABCF3-201ENST00000292808 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
ABCF3-201ENST00000292808 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
ABCF3-201ENST00000292808 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
ABCF3-201ENST00000292808 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
ABCF3-201ENST00000292808 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
ABCF3-201ENST00000292808 KRTAP19-6Q3LI70 58 aa5.38□□□□□ -1.55
ABCF3-201ENST00000292808 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
ABCF3-201ENST00000292808 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
ABCF3-201ENST00000292808 KMT2DO14686 5537 aa5.33□□□□□ -1.56
ABCF3-201ENST00000292808 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
ABCF3-201ENST00000292808 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
ABCF3-201ENST00000292808 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
ABCF3-201ENST00000292808 FCGBPQ9Y6R7 5405 aaPredicted RBP5.19□□□□□ -1.58
ABCF3-201ENST00000292808 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
ABCF3-201ENST00000292808 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
ABCF3-201ENST00000292808 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
ABCF3-201ENST00000292808 MT1EP04732 61 aa5.04□□□□□ -1.6
ABCF3-201ENST00000292808 INE1O15225 51 aa5.01□□□□□ -1.61
ABCF3-201ENST00000292808 MT1LQ93083 61 aa4.97□□□□□ -1.61
ABCF3-201ENST00000292808 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
ABCF3-201ENST00000292808 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
ABCF3-201ENST00000292808 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms