RNA–Protein interactions for RNA: ENST00000280780.6

FAM53B-201, Transcript of family with sequence similarity 53 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM53B, Length 1,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-201ENST00000280780 KRTAP3-1Q9BYR8 98 aa11.16□□□□□ -0.62
FAM53B-201ENST00000280780 COA5Q86WW8 74 aa11.14□□□□□ -0.63
FAM53B-201ENST00000280780 M0R2T5 61 aa11.11□□□□□ -0.63
FAM53B-201ENST00000280780 KRTAP10-6P60371 365 aaPredicted RBP11.03□□□□□ -0.64
FAM53B-201ENST00000280780 LORP23490 312 aaPredicted RBP11.02□□□□□ -0.65
FAM53B-201ENST00000280780 KRTAP9-2Q9BYQ4 174 aa11.02□□□□□ -0.65
FAM53B-201ENST00000280780 H1FX-AS1Q4G0G2 97 aa11□□□□□ -0.65
FAM53B-201ENST00000280780 SMIM26A0A096LP01 95 aa10.98□□□□□ -0.65
FAM53B-201ENST00000280780 LCE2DQ5TA82 110 aaPredicted RBP10.97□□□□□ -0.65
FAM53B-201ENST00000280780 CHKB-CPT1BH3BT56 60 aa10.94□□□□□ -0.66
FAM53B-201ENST00000280780 S4R3F8 94 aa10.82□□□□□ -0.68
FAM53B-201ENST00000280780 LCA10Q71F78 164 aa10.81□□□□□ -0.68
FAM53B-201ENST00000280780 Q1T7F1 81 aa10.8□□□□□ -0.68
FAM53B-201ENST00000280780 SPTSSBQ8NFR3 76 aa10.8□□□□□ -0.68
FAM53B-201ENST00000280780 KRTAP9-8Q9BYQ0 159 aa10.78□□□□□ -0.68
FAM53B-201ENST00000280780 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
FAM53B-201ENST00000280780 V9GYY9 64 aa10.75□□□□□ -0.69
FAM53B-201ENST00000280780 LINC01558Q9Y6Z2 57 aa10.72□□□□□ -0.69
FAM53B-201ENST00000280780 FSIP2Q5CZC0 6907 aa10.63□□□□□ -0.71
FAM53B-201ENST00000280780 MT2AP02795 61 aa10.63□□□□□ -0.71
FAM53B-201ENST00000280780 CSAG1Q6PB30 78 aa10.6□□□□□ -0.71
FAM53B-201ENST00000280780 KRTAP9-6A0A140TA67 174 aa10.57□□□□□ -0.72
FAM53B-201ENST00000280780 MT1FP04733 61 aa10.56□□□□□ -0.72
FAM53B-201ENST00000280780 PRR15LQ9BU68 103 aa10.54□□□□□ -0.72
FAM53B-201ENST00000280780 A0A1B0GU69 56 aa10.51□□□□□ -0.73
FAM53B-201ENST00000280780 PSPHP1O15172 72 aa10.51□□□□□ -0.73
FAM53B-201ENST00000280780 Q5VV11 94 aa10.49□□□□□ -0.73
FAM53B-201ENST00000280780 KRTAP10-10P60014 251 aa10.45□□□□□ -0.74
FAM53B-201ENST00000280780 CRCT1Q9UGL9 99 aa10.45□□□□□ -0.74
FAM53B-201ENST00000280780 SEC61GP60059 68 aa10.44□□□□□ -0.74
FAM53B-201ENST00000280780 H0YAA0 97 aa10.43□□□□□ -0.74
FAM53B-201ENST00000280780 KRTAP9-3Q9BYQ3 159 aa10.43□□□□□ -0.74
FAM53B-201ENST00000280780 USH2AO75445 5202 aa10.41□□□□□ -0.74
FAM53B-201ENST00000280780 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
FAM53B-201ENST00000280780 LCE2BO14633 110 aa10.34□□□□□ -0.75
FAM53B-201ENST00000280780 ADM2Q7Z4H4 148 aa10.29□□□□□ -0.76
FAM53B-201ENST00000280780 SSPOA2VEC9 5147 aa10.28□□□□□ -0.76
FAM53B-201ENST00000280780 P0C880 135 aa10.25□□□□□ -0.77
FAM53B-201ENST00000280780 A0A1B0GU33 70 aa10.22□□□□□ -0.77
FAM53B-201ENST00000280780 A6NED7 52 aa10.2□□□□□ -0.78
FAM53B-201ENST00000280780 UQCR11O14957 56 aa10.2□□□□□ -0.78
FAM53B-201ENST00000280780 SPATA8Q6RVD6 105 aa10.1□□□□□ -0.79
FAM53B-201ENST00000280780 CDC42SE1Q9NRR8 79 aa10.08□□□□□ -0.8
FAM53B-201ENST00000280780 MIR22HGQ0VDD5 57 aa10.07□□□□□ -0.8
FAM53B-201ENST00000280780 KRTAP19-1Q8IUB9 90 aa10.06□□□□□ -0.8
FAM53B-201ENST00000280780 KRTAP13-4Q3LI77 160 aa10.04□□□□□ -0.8
FAM53B-201ENST00000280780 BRK1Q8WUW1 75 aa10.04□□□□□ -0.8
FAM53B-201ENST00000280780 M0QZ58 72 aa10.03□□□□□ -0.8
FAM53B-201ENST00000280780 CRIPTQ9P021 101 aa10.03□□□□□ -0.8
FAM53B-201ENST00000280780 SPRR2GQ9BYE4 73 aa10.01□□□□□ -0.81
FAM53B-201ENST00000280780 A8MU10 97 aa9.97□□□□□ -0.81
FAM53B-201ENST00000280780 FCGBPQ9Y6R7 5405 aaPredicted RBP9.96□□□□□ -0.81
FAM53B-201ENST00000280780 R4GN34 69 aa9.92□□□□□ -0.82
FAM53B-201ENST00000280780 PRO0628Q9UI54 55 aa9.86□□□□□ -0.83
FAM53B-201ENST00000280780 KRTAP19-6Q3LI70 58 aa9.84□□□□□ -0.83
FAM53B-201ENST00000280780 KRTAP19-8Q3LI54 63 aa9.83□□□□□ -0.84
FAM53B-201ENST00000280780 MT1BP07438 61 aa9.79□□□□□ -0.84
FAM53B-201ENST00000280780 A0A0D9SG42 100 aa9.75□□□□□ -0.85
FAM53B-201ENST00000280780 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
FAM53B-201ENST00000280780 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.72□□□□□ -0.85
FAM53B-201ENST00000280780 A6NN06 94 aa9.69□□□□□ -0.86
FAM53B-201ENST00000280780 KRTAP12-1P59990 96 aa9.67□□□□□ -0.86
FAM53B-201ENST00000280780 KRTAP12-2P59991 146 aa9.62□□□□□ -0.87
FAM53B-201ENST00000280780 K7ERS5 55 aa9.61□□□□□ -0.87
FAM53B-201ENST00000280780 MACF1Q9UPN3 7388 aaKnown RBP9.57□□□□□ -0.88
FAM53B-201ENST00000280780 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
FAM53B-201ENST00000280780 KRTAP9-7A8MTY7 169 aa9.53□□□□□ -0.88
FAM53B-201ENST00000280780 PMAIP1Q13794 54 aa9.5□□□□□ -0.89
FAM53B-201ENST00000280780 PLAC4Q8WY50 150 aa9.5□□□□□ -0.89
FAM53B-201ENST00000280780 SYNE2Q8WXH0 6885 aaKnown RBP9.45□□□□□ -0.9
FAM53B-201ENST00000280780 KRTAP10-5P60370 271 aa9.45□□□□□ -0.9
FAM53B-201ENST00000280780 MT1XP80297 61 aa9.34□□□□□ -0.91
FAM53B-201ENST00000280780 CAMK2N1Q7Z7J9 78 aa9.27□□□□□ -0.93
FAM53B-201ENST00000280780 ROMO1P60602 79 aa9.24□□□□□ -0.93
FAM53B-201ENST00000280780 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
FAM53B-201ENST00000280780 KRTAP6-3Q3LI67 103 aa9.14□□□□□ -0.95
FAM53B-201ENST00000280780 KTN1-AS1Q86SY8 53 aa9.14□□□□□ -0.95
FAM53B-201ENST00000280780 C10orf95Q9H7T3 257 aa9.14□□□□□ -0.95
FAM53B-201ENST00000280780 KMT2DO14686 5537 aa9.1□□□□□ -0.95
FAM53B-201ENST00000280780 MUC12Q9UKN1 5478 aa8.98□□□□□ -0.97
FAM53B-201ENST00000280780 KRTAP10-7P60409 375 aaPredicted RBP8.95□□□□□ -0.98
FAM53B-201ENST00000280780 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
FAM53B-201ENST00000280780 SVIPQ8NHG7 77 aa8.91□□□□□ -0.98
FAM53B-201ENST00000280780 PRAC1Q96KF2 57 aa8.89□□□□□ -0.99
FAM53B-201ENST00000280780 KRTAP5-9P26371 169 aa8.86□□□□□ -0.99
FAM53B-201ENST00000280780 TNP1P09430 55 aa8.86□□□□□ -0.99
FAM53B-201ENST00000280780 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
FAM53B-201ENST00000280780 NEBP20929 6669 aa8.82□□□□□ -1
FAM53B-201ENST00000280780 KRTAP4-8A0A0G2JLE6 195 aa8.81□□□□□ -1
FAM53B-201ENST00000280780 KRTAP4-8Q9BYQ9 185 aa8.81□□□□□ -1
FAM53B-201ENST00000280780 MDN1Q9NU22 5596 aa8.76□□□□□ -1.01
FAM53B-201ENST00000280780 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
FAM53B-201ENST00000280780 KRTAP23-1A1A580 65 aa8.69□□□□□ -1.02
FAM53B-201ENST00000280780 SPRR2FQ96RM1 72 aa8.68□□□□□ -1.02
FAM53B-201ENST00000280780 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
FAM53B-201ENST00000280780 SPRR2EP22531 72 aa8.5□□□□□ -1.05
FAM53B-201ENST00000280780 SPRR2BP35325 72 aa8.5□□□□□ -1.05
FAM53B-201ENST00000280780 SPRR2AP35326 72 aa8.5□□□□□ -1.05
FAM53B-201ENST00000280780 LCE3AQ5TA76 89 aa8.5□□□□□ -1.05
FAM53B-201ENST00000280780 LCE1AQ5T7P2 110 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms