RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 PRAC1Q96KF2 57 aa10.71□□□□□ -0.69
CDC42EP2-201ENST00000279249 LINC01554Q52M75 96 aa10.68□□□□□ -0.7
CDC42EP2-201ENST00000279249 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
CDC42EP2-201ENST00000279249 KRTAP16-1A8MUX0 517 aa10.57□□□□□ -0.72
CDC42EP2-201ENST00000279249 IGKV2D-30A0A075B6S6 120 aa10.53□□□□□ -0.72
CDC42EP2-201ENST00000279249 HERC1Q15751 4861 aa10.52□□□□□ -0.72
CDC42EP2-201ENST00000279249 C9orf92A6NGG3 77 aa10.5□□□□□ -0.73
CDC42EP2-201ENST00000279249 H3BS24 57 aa10.5□□□□□ -0.73
CDC42EP2-201ENST00000279249 TPRXLQ17RH7 258 aa10.43□□□□□ -0.74
CDC42EP2-201ENST00000279249 LPAP08519 4548 aa10.42□□□□□ -0.74
CDC42EP2-201ENST00000279249 CSAG1Q6PB30 78 aa10.41□□□□□ -0.74
CDC42EP2-201ENST00000279249 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
CDC42EP2-201ENST00000279249 XP32Q5T750 250 aa10.36□□□□□ -0.75
CDC42EP2-201ENST00000279249 C20orf166-AS1Q96NR2 134 aa10.32□□□□□ -0.76
CDC42EP2-201ENST00000279249 A8MUU9 505 aa10.31□□□□□ -0.76
CDC42EP2-201ENST00000279249 LRP2P98164 4655 aa10.3□□□□□ -0.76
CDC42EP2-201ENST00000279249 RPL37P61927 97 aaKnown RBP10.24□□□□□ -0.77
CDC42EP2-201ENST00000279249 H0YAA0 97 aa10.2□□□□□ -0.78
CDC42EP2-201ENST00000279249 KRTAP25-1Q3LHN0 102 aa10.17□□□□□ -0.78
CDC42EP2-201ENST00000279249 A0A1B0GU33 70 aa10.12□□□□□ -0.79
CDC42EP2-201ENST00000279249 H1FX-AS1Q4G0G2 97 aa10.09□□□□□ -0.79
CDC42EP2-201ENST00000279249 MUC17Q685J3 4493 aa10.08□□□□□ -0.8
CDC42EP2-201ENST00000279249 SEC61BP60468 96 aaKnown RBP10.04□□□□□ -0.8
CDC42EP2-201ENST00000279249 ROMO1P60602 79 aa10□□□□□ -0.81
CDC42EP2-201ENST00000279249 K7ERS5 55 aa9.99□□□□□ -0.81
CDC42EP2-201ENST00000279249 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.81
CDC42EP2-201ENST00000279249 KRTAP4-1Q9BYQ7 146 aa9.95□□□□□ -0.82
CDC42EP2-201ENST00000279249 UBR4Q5T4S7 5183 aa9.9□□□□□ -0.82
CDC42EP2-201ENST00000279249 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.83
CDC42EP2-201ENST00000279249 RNF213Q63HN8 5207 aa9.79□□□□□ -0.84
CDC42EP2-201ENST00000279249 MUC2Q02817 5179 aa9.77□□□□□ -0.85
CDC42EP2-201ENST00000279249 P0C880 135 aa9.64□□□□□ -0.87
CDC42EP2-201ENST00000279249 KRTAP19-2Q3LHN2 52 aa9.64□□□□□ -0.87
CDC42EP2-201ENST00000279249 CRIPTQ9P021 101 aa9.64□□□□□ -0.87
CDC42EP2-201ENST00000279249 KRTAP10-6P60371 365 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP2-201ENST00000279249 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
CDC42EP2-201ENST00000279249 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
CDC42EP2-201ENST00000279249 KRTAP13-4Q3LI77 160 aa9.51□□□□□ -0.89
CDC42EP2-201ENST00000279249 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
CDC42EP2-201ENST00000279249 SPINT4Q6UDR6 99 aa9.48□□□□□ -0.89
CDC42EP2-201ENST00000279249 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
CDC42EP2-201ENST00000279249 A0A0D9SG42 100 aa9.43□□□□□ -0.9
CDC42EP2-201ENST00000279249 S4R3F8 94 aa9.41□□□□□ -0.9
CDC42EP2-201ENST00000279249 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.9
CDC42EP2-201ENST00000279249 KRTAP15-1Q3LI76 137 aa9.38□□□□□ -0.91
CDC42EP2-201ENST00000279249 MT1HP80294 61 aa9.32□□□□□ -0.92
CDC42EP2-201ENST00000279249 C10orf95Q9H7T3 257 aa9.3□□□□□ -0.92
CDC42EP2-201ENST00000279249 A0A0A0MQY5 61 aa9.26□□□□□ -0.93
CDC42EP2-201ENST00000279249 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
CDC42EP2-201ENST00000279249 KRTAP12-1P59990 96 aa9.22□□□□□ -0.93
CDC42EP2-201ENST00000279249 NDUFAF8A1L188 74 aa9.2□□□□□ -0.94
CDC42EP2-201ENST00000279249 M0QZ58 72 aa9.17□□□□□ -0.94
CDC42EP2-201ENST00000279249 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
CDC42EP2-201ENST00000279249 M0R2T5 61 aa9.14□□□□□ -0.95
CDC42EP2-201ENST00000279249 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
CDC42EP2-201ENST00000279249 KRTAP9-8Q9BYQ0 159 aa8.95□□□□□ -0.98
CDC42EP2-201ENST00000279249 MT2AP02795 61 aa8.89□□□□□ -0.99
CDC42EP2-201ENST00000279249 MT1FP04733 61 aa8.84□□□□□ -0.99
CDC42EP2-201ENST00000279249 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
CDC42EP2-201ENST00000279249 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
CDC42EP2-201ENST00000279249 R4GN34 69 aa8.73□□□□□ -1.01
CDC42EP2-201ENST00000279249 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
CDC42EP2-201ENST00000279249 KRTAP9-3Q9BYQ3 159 aa8.63□□□□□ -1.03
CDC42EP2-201ENST00000279249 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
CDC42EP2-201ENST00000279249 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
CDC42EP2-201ENST00000279249 LUZP6Q538Z0 58 aa8.53□□□□□ -1.04
CDC42EP2-201ENST00000279249 LCE2BO14633 110 aa8.45□□□□□ -1.06
CDC42EP2-201ENST00000279249 LCE2DQ5TA82 110 aaPredicted RBP8.4□□□□□ -1.06
CDC42EP2-201ENST00000279249 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
CDC42EP2-201ENST00000279249 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
CDC42EP2-201ENST00000279249 KRTAP23-1A1A580 65 aa8.32□□□□□ -1.08
CDC42EP2-201ENST00000279249 MT1BP07438 61 aa8.31□□□□□ -1.08
CDC42EP2-201ENST00000279249 USH2AO75445 5202 aa8.28□□□□□ -1.08
CDC42EP2-201ENST00000279249 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
CDC42EP2-201ENST00000279249 SPRR5A0A1B0GTR4 108 aa8.19□□□□□ -1.1
CDC42EP2-201ENST00000279249 TNP1P09430 55 aa8.15□□□□□ -1.1
CDC42EP2-201ENST00000279249 SSPOA2VEC9 5147 aa8.07□□□□□ -1.12
CDC42EP2-201ENST00000279249 FSIP2Q5CZC0 6907 aa8.05□□□□□ -1.12
CDC42EP2-201ENST00000279249 MT1XP80297 61 aa7.98□□□□□ -1.13
CDC42EP2-201ENST00000279249 KRTAP19-6Q3LI70 58 aa7.97□□□□□ -1.13
CDC42EP2-201ENST00000279249 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
CDC42EP2-201ENST00000279249 CRCT1Q9UGL9 99 aa7.88□□□□□ -1.15
CDC42EP2-201ENST00000279249 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
CDC42EP2-201ENST00000279249 FCGBPQ9Y6R7 5405 aaPredicted RBP7.76□□□□□ -1.17
CDC42EP2-201ENST00000279249 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
CDC42EP2-201ENST00000279249 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
CDC42EP2-201ENST00000279249 INE1O15225 51 aa7.61□□□□□ -1.19
CDC42EP2-201ENST00000279249 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
CDC42EP2-201ENST00000279249 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
CDC42EP2-201ENST00000279249 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
CDC42EP2-201ENST00000279249 KMT2DO14686 5537 aa7.43□□□□□ -1.22
CDC42EP2-201ENST00000279249 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
CDC42EP2-201ENST00000279249 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
CDC42EP2-201ENST00000279249 MACF1Q9UPN3 7388 aaKnown RBP7.36□□□□□ -1.23
CDC42EP2-201ENST00000279249 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
CDC42EP2-201ENST00000279249 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
CDC42EP2-201ENST00000279249 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
CDC42EP2-201ENST00000279249 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
CDC42EP2-201ENST00000279249 KRTAP19-7Q3SYF9 63 aa7.13□□□□□ -1.27
CDC42EP2-201ENST00000279249 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms