RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 A6NED7 52 aa4.92□□□□□ -1.62
TRIM55-201ENST00000276573 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
TRIM55-201ENST00000276573 LCA10Q71F78 164 aa4.89□□□□□ -1.63
TRIM55-201ENST00000276573 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
TRIM55-201ENST00000276573 A8MU10 97 aa4.87□□□□□ -1.63
TRIM55-201ENST00000276573 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
TRIM55-201ENST00000276573 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.64
TRIM55-201ENST00000276573 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.64
TRIM55-201ENST00000276573 H1FX-AS1Q4G0G2 97 aa4.83□□□□□ -1.64
TRIM55-201ENST00000276573 S4R3F8 94 aa4.82□□□□□ -1.64
TRIM55-201ENST00000276573 LRP2P98164 4655 aa4.82□□□□□ -1.64
TRIM55-201ENST00000276573 LPAP08519 4548 aa4.81□□□□□ -1.64
TRIM55-201ENST00000276573 UQCR11O14957 56 aa4.81□□□□□ -1.64
TRIM55-201ENST00000276573 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
TRIM55-201ENST00000276573 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
TRIM55-201ENST00000276573 HERC1Q15751 4861 aa4.8□□□□□ -1.64
TRIM55-201ENST00000276573 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
TRIM55-201ENST00000276573 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
TRIM55-201ENST00000276573 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
TRIM55-201ENST00000276573 A0A1B0GU33 70 aa4.75□□□□□ -1.65
TRIM55-201ENST00000276573 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
TRIM55-201ENST00000276573 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
TRIM55-201ENST00000276573 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
TRIM55-201ENST00000276573 H3BS24 57 aa4.7□□□□□ -1.66
TRIM55-201ENST00000276573 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
TRIM55-201ENST00000276573 H0YAA0 97 aa4.69□□□□□ -1.66
TRIM55-201ENST00000276573 A6NN06 94 aa4.68□□□□□ -1.66
TRIM55-201ENST00000276573 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.66
TRIM55-201ENST00000276573 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
TRIM55-201ENST00000276573 P0C880 135 aa4.64□□□□□ -1.67
TRIM55-201ENST00000276573 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
TRIM55-201ENST00000276573 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
TRIM55-201ENST00000276573 HMCN2Q8NDA2 5059 aa4.59□□□□□ -1.68
TRIM55-201ENST00000276573 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
TRIM55-201ENST00000276573 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
TRIM55-201ENST00000276573 A0A0D9SG42 100 aa4.53□□□□□ -1.68
TRIM55-201ENST00000276573 M0QZ58 72 aa4.52□□□□□ -1.69
TRIM55-201ENST00000276573 K7ERS5 55 aa4.51□□□□□ -1.69
TRIM55-201ENST00000276573 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
TRIM55-201ENST00000276573 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
TRIM55-201ENST00000276573 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
TRIM55-201ENST00000276573 MUC2Q02817 5179 aa4.45□□□□□ -1.7
TRIM55-201ENST00000276573 R4GN34 69 aa4.44□□□□□ -1.7
TRIM55-201ENST00000276573 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
TRIM55-201ENST00000276573 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
TRIM55-201ENST00000276573 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
TRIM55-201ENST00000276573 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
TRIM55-201ENST00000276573 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.7
TRIM55-201ENST00000276573 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
TRIM55-201ENST00000276573 ROMO1P60602 79 aa4.37□□□□□ -1.71
TRIM55-201ENST00000276573 MT1HP80294 61 aa4.36□□□□□ -1.71
TRIM55-201ENST00000276573 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
TRIM55-201ENST00000276573 M0R2T5 61 aa4.33□□□□□ -1.72
TRIM55-201ENST00000276573 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
TRIM55-201ENST00000276573 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
TRIM55-201ENST00000276573 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
TRIM55-201ENST00000276573 MT2AP02795 61 aa4.23□□□□□ -1.73
TRIM55-201ENST00000276573 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
TRIM55-201ENST00000276573 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
TRIM55-201ENST00000276573 MT1FP04733 61 aa4.21□□□□□ -1.74
TRIM55-201ENST00000276573 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
TRIM55-201ENST00000276573 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
TRIM55-201ENST00000276573 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
TRIM55-201ENST00000276573 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
TRIM55-201ENST00000276573 LCE2BO14633 110 aa4.18□□□□□ -1.74
TRIM55-201ENST00000276573 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
TRIM55-201ENST00000276573 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
TRIM55-201ENST00000276573 KRTAP9-6A0A140TA67 174 aa4.14□□□□□ -1.75
TRIM55-201ENST00000276573 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
TRIM55-201ENST00000276573 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
TRIM55-201ENST00000276573 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
TRIM55-201ENST00000276573 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
TRIM55-201ENST00000276573 MT1BP07438 61 aa4.03□□□□□ -1.76
TRIM55-201ENST00000276573 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
TRIM55-201ENST00000276573 TNP1P09430 55 aa4.02□□□□□ -1.77
TRIM55-201ENST00000276573 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
TRIM55-201ENST00000276573 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
TRIM55-201ENST00000276573 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
TRIM55-201ENST00000276573 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
TRIM55-201ENST00000276573 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
TRIM55-201ENST00000276573 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
TRIM55-201ENST00000276573 MT1XP80297 61 aa3.93□□□□□ -1.78
TRIM55-201ENST00000276573 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
TRIM55-201ENST00000276573 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
TRIM55-201ENST00000276573 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
TRIM55-201ENST00000276573 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
TRIM55-201ENST00000276573 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
TRIM55-201ENST00000276573 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
TRIM55-201ENST00000276573 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
TRIM55-201ENST00000276573 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
TRIM55-201ENST00000276573 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
TRIM55-201ENST00000276573 KRTAP8-1Q8IUC2 63 aa3.76□□□□□ -1.81
TRIM55-201ENST00000276573 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
TRIM55-201ENST00000276573 USH2AO75445 5202 aa3.73□□□□□ -1.81
TRIM55-201ENST00000276573 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
TRIM55-201ENST00000276573 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
TRIM55-201ENST00000276573 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
TRIM55-201ENST00000276573 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
TRIM55-201ENST00000276573 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
TRIM55-201ENST00000276573 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms