RNA–Protein interactions for RNA: ENST00000270583.9

KLHDC4-201, Transcript of kelch domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KLHDC4, Length 1,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-201ENST00000270583 LRP2P98164 4655 aa10.52□□□□□ -0.72
KLHDC4-201ENST00000270583 Q5W150 140 aa10.49□□□□□ -0.73
KLHDC4-201ENST00000270583 LINC01554Q52M75 96 aa10.46□□□□□ -0.74
KLHDC4-201ENST00000270583 PCOTHQ58A44 107 aa10.43□□□□□ -0.74
KLHDC4-201ENST00000270583 SEC61BP60468 96 aaKnown RBP10.42□□□□□ -0.74
KLHDC4-201ENST00000270583 SPINK7P58062 85 aa10.39□□□□□ -0.75
KLHDC4-201ENST00000270583 UBR4Q5T4S7 5183 aa10.37□□□□□ -0.75
KLHDC4-201ENST00000270583 IGKV2D-30A0A075B6S6 120 aa10.32□□□□□ -0.76
KLHDC4-201ENST00000270583 IGKV2-30P06310 120 aa10.32□□□□□ -0.76
KLHDC4-201ENST00000270583 HRES1P13985 223 aa10.31□□□□□ -0.76
KLHDC4-201ENST00000270583 MUC17Q685J3 4493 aa10.26□□□□□ -0.77
KLHDC4-201ENST00000270583 PRAC1Q96KF2 57 aa10.25□□□□□ -0.77
KLHDC4-201ENST00000270583 SPATA8Q6RVD6 105 aa10.21□□□□□ -0.77
KLHDC4-201ENST00000270583 ACYP2P14621 99 aa10.21□□□□□ -0.78
KLHDC4-201ENST00000270583 RNF213Q63HN8 5207 aa10.18□□□□□ -0.78
KLHDC4-201ENST00000270583 KRTAP4-1Q9BYQ7 146 aa10.18□□□□□ -0.78
KLHDC4-201ENST00000270583 A0A1B0GU69 56 aa10.1□□□□□ -0.79
KLHDC4-201ENST00000270583 ADM2Q7Z4H4 148 aa10.1□□□□□ -0.79
KLHDC4-201ENST00000270583 UQCR11O14957 56 aa10.09□□□□□ -0.79
KLHDC4-201ENST00000270583 MUC2Q02817 5179 aa10.09□□□□□ -0.79
KLHDC4-201ENST00000270583 MIR22HGQ0VDD5 57 aa10.06□□□□□ -0.8
KLHDC4-201ENST00000270583 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
KLHDC4-201ENST00000270583 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.82
KLHDC4-201ENST00000270583 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
KLHDC4-201ENST00000270583 KRTAP3-1Q9BYR8 98 aa9.88□□□□□ -0.83
KLHDC4-201ENST00000270583 KRTAP19-2Q3LHN2 52 aa9.83□□□□□ -0.84
KLHDC4-201ENST00000270583 H1FX-AS1Q4G0G2 97 aa9.8□□□□□ -0.84
KLHDC4-201ENST00000270583 ROMO1P60602 79 aa9.75□□□□□ -0.85
KLHDC4-201ENST00000270583 FAT4Q6V0I7 4981 aa9.75□□□□□ -0.85
KLHDC4-201ENST00000270583 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
KLHDC4-201ENST00000270583 KRTAP25-1Q3LHN0 102 aa9.72□□□□□ -0.85
KLHDC4-201ENST00000270583 S4R3F8 94 aa9.68□□□□□ -0.86
KLHDC4-201ENST00000270583 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
KLHDC4-201ENST00000270583 MT1HP80294 61 aa9.57□□□□□ -0.88
KLHDC4-201ENST00000270583 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
KLHDC4-201ENST00000270583 M0R2T5 61 aa9.51□□□□□ -0.89
KLHDC4-201ENST00000270583 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
KLHDC4-201ENST00000270583 K7ERS5 55 aa9.47□□□□□ -0.89
KLHDC4-201ENST00000270583 P0C880 135 aa9.4□□□□□ -0.91
KLHDC4-201ENST00000270583 H0YAA0 97 aa9.36□□□□□ -0.91
KLHDC4-201ENST00000270583 A0A1B0GU33 70 aa9.34□□□□□ -0.91
KLHDC4-201ENST00000270583 A0A0A0MQY5 61 aa9.29□□□□□ -0.92
KLHDC4-201ENST00000270583 KRTAP10-6P60371 365 aaPredicted RBP9.27□□□□□ -0.93
KLHDC4-201ENST00000270583 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
KLHDC4-201ENST00000270583 KRTAP9-8Q9BYQ0 159 aa9.17□□□□□ -0.94
KLHDC4-201ENST00000270583 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.95
KLHDC4-201ENST00000270583 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
KLHDC4-201ENST00000270583 MT2AP02795 61 aa9.13□□□□□ -0.95
KLHDC4-201ENST00000270583 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
KLHDC4-201ENST00000270583 MT1FP04733 61 aa9.06□□□□□ -0.96
KLHDC4-201ENST00000270583 NDUFAF8A1L188 74 aa9.02□□□□□ -0.97
KLHDC4-201ENST00000270583 KRTAP15-1Q3LI76 137 aa9.02□□□□□ -0.97
KLHDC4-201ENST00000270583 CRIPTQ9P021 101 aa8.96□□□□□ -0.98
KLHDC4-201ENST00000270583 R4GN34 69 aa8.92□□□□□ -0.98
KLHDC4-201ENST00000270583 M0QZ58 72 aa8.89□□□□□ -0.99
KLHDC4-201ENST00000270583 KRTAP9-3Q9BYQ3 159 aa8.85□□□□□ -0.99
KLHDC4-201ENST00000270583 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
KLHDC4-201ENST00000270583 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
KLHDC4-201ENST00000270583 SPRR2GQ9BYE4 73 aa8.8□□□□□ -1
KLHDC4-201ENST00000270583 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
KLHDC4-201ENST00000270583 KRTAP9-2Q9BYQ4 174 aa8.73□□□□□ -1.01
KLHDC4-201ENST00000270583 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
KLHDC4-201ENST00000270583 A0A0D9SG42 100 aa8.68□□□□□ -1.02
KLHDC4-201ENST00000270583 LCE2BO14633 110 aa8.66□□□□□ -1.02
KLHDC4-201ENST00000270583 KRTAP19-8Q3LI54 63 aa8.6□□□□□ -1.03
KLHDC4-201ENST00000270583 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
KLHDC4-201ENST00000270583 USH2AO75445 5202 aa8.58□□□□□ -1.04
KLHDC4-201ENST00000270583 FSIP2Q5CZC0 6907 aa8.55□□□□□ -1.04
KLHDC4-201ENST00000270583 MT1BP07438 61 aa8.51□□□□□ -1.05
KLHDC4-201ENST00000270583 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
KLHDC4-201ENST00000270583 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
KLHDC4-201ENST00000270583 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
KLHDC4-201ENST00000270583 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
KLHDC4-201ENST00000270583 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
KLHDC4-201ENST00000270583 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
KLHDC4-201ENST00000270583 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
KLHDC4-201ENST00000270583 KRTAP19-6Q3LI70 58 aa8.19□□□□□ -1.1
KLHDC4-201ENST00000270583 MT1XP80297 61 aa8.18□□□□□ -1.1
KLHDC4-201ENST00000270583 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
KLHDC4-201ENST00000270583 KRTAP10-5P60370 271 aa8.16□□□□□ -1.1
KLHDC4-201ENST00000270583 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
KLHDC4-201ENST00000270583 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
KLHDC4-201ENST00000270583 TNP1P09430 55 aa7.87□□□□□ -1.15
KLHDC4-201ENST00000270583 KRTAP10-7P60409 375 aaPredicted RBP7.85□□□□□ -1.15
KLHDC4-201ENST00000270583 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
KLHDC4-201ENST00000270583 KRTAP10-12P60413 245 aa7.76□□□□□ -1.17
KLHDC4-201ENST00000270583 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
KLHDC4-201ENST00000270583 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
KLHDC4-201ENST00000270583 SPRR5A0A1B0GTR4 108 aa7.66□□□□□ -1.18
KLHDC4-201ENST00000270583 SYNE2Q8WXH0 6885 aaKnown RBP7.64□□□□□ -1.19
KLHDC4-201ENST00000270583 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
KLHDC4-201ENST00000270583 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
KLHDC4-201ENST00000270583 KMT2DO14686 5537 aa7.6□□□□□ -1.19
KLHDC4-201ENST00000270583 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
KLHDC4-201ENST00000270583 INE1O15225 51 aa7.55□□□□□ -1.2
KLHDC4-201ENST00000270583 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
KLHDC4-201ENST00000270583 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
KLHDC4-201ENST00000270583 KRTAP6-3Q3LI67 103 aa7.39□□□□□ -1.23
KLHDC4-201ENST00000270583 KRTAP19-5Q3LI72 72 aa7.34□□□□□ -1.23
KLHDC4-201ENST00000270583 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms