RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 MUC2Q02817 5179 aa11.8□□□□□ -0.52
EPCAM-201ENST00000263735 Q1T7F1 81 aa11.78□□□□□ -0.52
EPCAM-201ENST00000263735 UBR4Q5T4S7 5183 aa11.77□□□□□ -0.53
EPCAM-201ENST00000263735 V9GYY9 64 aa11.77□□□□□ -0.53
EPCAM-201ENST00000263735 KRTAP3-3Q9BYR6 98 aa11.76□□□□□ -0.53
EPCAM-201ENST00000263735 LINC01558Q9Y6Z2 57 aa11.7□□□□□ -0.54
EPCAM-201ENST00000263735 RNF213Q63HN8 5207 aa11.69□□□□□ -0.54
EPCAM-201ENST00000263735 CSAG1Q6PB30 78 aa11.6□□□□□ -0.55
EPCAM-201ENST00000263735 LCE2CQ5TA81 110 aa11.58□□□□□ -0.56
EPCAM-201ENST00000263735 PRR15LQ9BU68 103 aa11.56□□□□□ -0.56
EPCAM-201ENST00000263735 FLGP20930 4061 aaPredicted RBP11.55□□□□□ -0.56
EPCAM-201ENST00000263735 A0A1B0GU69 56 aa11.55□□□□□ -0.56
EPCAM-201ENST00000263735 PSPHP1O15172 72 aa11.53□□□□□ -0.56
EPCAM-201ENST00000263735 SEC61GP60059 68 aa11.51□□□□□ -0.57
EPCAM-201ENST00000263735 Q5VV11 94 aa11.46□□□□□ -0.58
EPCAM-201ENST00000263735 H0YAA0 97 aa11.38□□□□□ -0.59
EPCAM-201ENST00000263735 MT1HP80294 61 aa11.37□□□□□ -0.59
EPCAM-201ENST00000263735 FAT4Q6V0I7 4981 aa11.33□□□□□ -0.6
EPCAM-201ENST00000263735 KRTAP3-2Q9BYR7 98 aa11.32□□□□□ -0.6
EPCAM-201ENST00000263735 KRTAP10-6P60371 365 aaPredicted RBP11.3□□□□□ -0.6
EPCAM-201ENST00000263735 ADM2Q7Z4H4 148 aa11.3□□□□□ -0.6
EPCAM-201ENST00000263735 M0R2T5 61 aa11.26□□□□□ -0.61
EPCAM-201ENST00000263735 P0C880 135 aa11.23□□□□□ -0.61
EPCAM-201ENST00000263735 A0A1B0GU33 70 aa11.21□□□□□ -0.61
EPCAM-201ENST00000263735 A6NED7 52 aa11.21□□□□□ -0.62
EPCAM-201ENST00000263735 UQCR11O14957 56 aa11.2□□□□□ -0.62
EPCAM-201ENST00000263735 MIR22HGQ0VDD5 57 aa11.04□□□□□ -0.64
EPCAM-201ENST00000263735 BRK1Q8WUW1 75 aa11.03□□□□□ -0.64
EPCAM-201ENST00000263735 CDC42SE1Q9NRR8 79 aa11.02□□□□□ -0.65
EPCAM-201ENST00000263735 SPATA8Q6RVD6 105 aa11.01□□□□□ -0.65
EPCAM-201ENST00000263735 LCE2AQ5TA79 106 aaPredicted RBP10.98□□□□□ -0.65
EPCAM-201ENST00000263735 M0QZ58 72 aa10.98□□□□□ -0.65
EPCAM-201ENST00000263735 KRTAP13-4Q3LI77 160 aa10.98□□□□□ -0.65
EPCAM-201ENST00000263735 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
EPCAM-201ENST00000263735 R4GN34 69 aa10.94□□□□□ -0.66
EPCAM-201ENST00000263735 KRTAP9-8Q9BYQ0 159 aa10.93□□□□□ -0.66
EPCAM-201ENST00000263735 CRIPTQ9P021 101 aa10.91□□□□□ -0.66
EPCAM-201ENST00000263735 A8MU10 97 aa10.89□□□□□ -0.67
EPCAM-201ENST00000263735 MT2AP02795 61 aa10.89□□□□□ -0.67
EPCAM-201ENST00000263735 MT1FP04733 61 aa10.83□□□□□ -0.68
EPCAM-201ENST00000263735 KRTAP10-10P60014 251 aa10.81□□□□□ -0.68
EPCAM-201ENST00000263735 A0A0D9SG42 100 aa10.75□□□□□ -0.69
EPCAM-201ENST00000263735 PRO0628Q9UI54 55 aa10.75□□□□□ -0.69
EPCAM-201ENST00000263735 LINC01554Q52M75 96 aa10.69□□□□□ -0.7
EPCAM-201ENST00000263735 SPRR2GQ9BYE4 73 aa10.68□□□□□ -0.7
EPCAM-201ENST00000263735 KRTAP19-1Q8IUB9 90 aa10.62□□□□□ -0.71
EPCAM-201ENST00000263735 K7ERS5 55 aa10.58□□□□□ -0.72
EPCAM-201ENST00000263735 A6NN06 94 aa10.57□□□□□ -0.72
EPCAM-201ENST00000263735 KRTAP12-1P59990 96 aa10.57□□□□□ -0.72
EPCAM-201ENST00000263735 KRTAP9-3Q9BYQ3 159 aa10.54□□□□□ -0.72
EPCAM-201ENST00000263735 KRTAP12-2P59991 146 aa10.53□□□□□ -0.72
EPCAM-201ENST00000263735 SPINT4Q6UDR6 99 aa10.52□□□□□ -0.73
EPCAM-201ENST00000263735 PMAIP1Q13794 54 aa10.42□□□□□ -0.74
EPCAM-201ENST00000263735 KRTAP19-8Q3LI54 63 aa10.41□□□□□ -0.74
EPCAM-201ENST00000263735 PLAC4Q8WY50 150 aa10.3□□□□□ -0.76
EPCAM-201ENST00000263735 LCE2BO14633 110 aa10.24□□□□□ -0.77
EPCAM-201ENST00000263735 MT1BP07438 61 aa10.24□□□□□ -0.77
EPCAM-201ENST00000263735 CAMK2N1Q7Z7J9 78 aa10.22□□□□□ -0.77
EPCAM-201ENST00000263735 ROMO1P60602 79 aa10.11□□□□□ -0.79
EPCAM-201ENST00000263735 LCE2DQ5TA82 110 aaPredicted RBP10.01□□□□□ -0.81
EPCAM-201ENST00000263735 C10orf95Q9H7T3 257 aa9.99□□□□□ -0.81
EPCAM-201ENST00000263735 KTN1-AS1Q86SY8 53 aa9.99□□□□□ -0.81
EPCAM-201ENST00000263735 USH2AO75445 5202 aa9.91□□□□□ -0.82
EPCAM-201ENST00000263735 MT1XP80297 61 aa9.9□□□□□ -0.83
EPCAM-201ENST00000263735 KRTAP10-5P60370 271 aa9.88□□□□□ -0.83
EPCAM-201ENST00000263735 PRO2289Q9P1D8 64 aa9.85□□□□□ -0.83
EPCAM-201ENST00000263735 KRTAP25-1Q3LHN0 102 aa9.76□□□□□ -0.85
EPCAM-201ENST00000263735 TNP1P09430 55 aa9.73□□□□□ -0.85
EPCAM-201ENST00000263735 PRAC1Q96KF2 57 aa9.73□□□□□ -0.85
EPCAM-201ENST00000263735 KRTAP19-6Q3LI70 58 aa9.67□□□□□ -0.86
EPCAM-201ENST00000263735 SSPOA2VEC9 5147 aa9.66□□□□□ -0.86
EPCAM-201ENST00000263735 SVIPQ8NHG7 77 aa9.62□□□□□ -0.87
EPCAM-201ENST00000263735 KRTAP9-2Q9BYQ4 174 aa9.62□□□□□ -0.87
EPCAM-201ENST00000263735 KRTAP10-7P60409 375 aaPredicted RBP9.48□□□□□ -0.89
EPCAM-201ENST00000263735 FSIP2Q5CZC0 6907 aa9.48□□□□□ -0.89
EPCAM-201ENST00000263735 KRTAP23-1A1A580 65 aa9.45□□□□□ -0.9
EPCAM-201ENST00000263735 PP632Q6XCG6 107 aa9.43□□□□□ -0.9
EPCAM-201ENST00000263735 KRTAP10-12P60413 245 aa9.4□□□□□ -0.9
EPCAM-201ENST00000263735 LCE3AQ5TA76 89 aa9.31□□□□□ -0.92
EPCAM-201ENST00000263735 CRCT1Q9UGL9 99 aa9.28□□□□□ -0.92
EPCAM-201ENST00000263735 FCGBPQ9Y6R7 5405 aaPredicted RBP9.21□□□□□ -0.94
EPCAM-201ENST00000263735 KRTAP8-1Q8IUC2 63 aa9.14□□□□□ -0.95
EPCAM-201ENST00000263735 KRTAP4-8A0A0G2JLE6 195 aa9.11□□□□□ -0.95
EPCAM-201ENST00000263735 KRTAP4-8Q9BYQ9 185 aa9.11□□□□□ -0.95
EPCAM-201ENST00000263735 KMT2DO14686 5537 aa9.04□□□□□ -0.96
EPCAM-201ENST00000263735 KRTAP12-3P60328 96 aa8.95□□□□□ -0.98
EPCAM-201ENST00000263735 KRTAP9-6A0A140TA67 174 aa8.92□□□□□ -0.98
EPCAM-201ENST00000263735 KRTAP19-5Q3LI72 72 aa8.91□□□□□ -0.98
EPCAM-201ENST00000263735 KRTAP19-7Q3SYF9 63 aa8.83□□□□□ -1
EPCAM-201ENST00000263735 KRTAP15-1Q3LI76 137 aa8.76□□□□□ -1.01
EPCAM-201ENST00000263735 MACF1Q9UPN3 7388 aaKnown RBP8.71□□□□□ -1.02
EPCAM-201ENST00000263735 MT1EP04732 61 aa8.68□□□□□ -1.02
EPCAM-201ENST00000263735 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.59□□□□□ -1.03
EPCAM-201ENST00000263735 SPRR2FQ96RM1 72 aa8.57□□□□□ -1.04
EPCAM-201ENST00000263735 KRTAP5-9P26371 169 aa8.52□□□□□ -1.05
EPCAM-201ENST00000263735 MT1LQ93083 61 aa8.5□□□□□ -1.05
EPCAM-201ENST00000263735 KRTAP19-4Q3LI73 84 aa8.46□□□□□ -1.06
EPCAM-201ENST00000263735 SYNE2Q8WXH0 6885 aaKnown RBP8.43□□□□□ -1.06
EPCAM-201ENST00000263735 KRTAP6-3Q3LI67 103 aa8.39□□□□□ -1.07
EPCAM-201ENST00000263735 KRTAP19-3Q7Z4W3 81 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms