RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 LCA10Q71F78 164 aa5.33□□□□□ -1.56
TTC39A-201ENST00000262675 MUC2Q02817 5179 aa5.31□□□□□ -1.56
TTC39A-201ENST00000262675 RETNLBQ9BQ08 111 aa5.3□□□□□ -1.56
TTC39A-201ENST00000262675 A6NN06 94 aa5.29□□□□□ -1.56
TTC39A-201ENST00000262675 SPTSSBQ8NFR3 76 aa5.28□□□□□ -1.56
TTC39A-201ENST00000262675 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
TTC39A-201ENST00000262675 IGKV2D-30A0A075B6S6 120 aa5.26□□□□□ -1.57
TTC39A-201ENST00000262675 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
TTC39A-201ENST00000262675 A0A1B0GU69 56 aa5.25□□□□□ -1.57
TTC39A-201ENST00000262675 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
TTC39A-201ENST00000262675 SPINK7P58062 85 aa5.25□□□□□ -1.57
TTC39A-201ENST00000262675 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
TTC39A-201ENST00000262675 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
TTC39A-201ENST00000262675 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.58
TTC39A-201ENST00000262675 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
TTC39A-201ENST00000262675 A8MUU9 505 aa5.2□□□□□ -1.58
TTC39A-201ENST00000262675 UQCR11O14957 56 aa5.19□□□□□ -1.58
TTC39A-201ENST00000262675 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
TTC39A-201ENST00000262675 XP32Q5T750 250 aa5.14□□□□□ -1.59
TTC39A-201ENST00000262675 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
TTC39A-201ENST00000262675 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
TTC39A-201ENST00000262675 KRTAP4-1Q9BYQ7 146 aa5.09□□□□□ -1.59
TTC39A-201ENST00000262675 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
TTC39A-201ENST00000262675 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
TTC39A-201ENST00000262675 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
TTC39A-201ENST00000262675 KRTAP3-1Q9BYR8 98 aa5.02□□□□□ -1.61
TTC39A-201ENST00000262675 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
TTC39A-201ENST00000262675 MT1HP80294 61 aa5.01□□□□□ -1.61
TTC39A-201ENST00000262675 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
TTC39A-201ENST00000262675 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
TTC39A-201ENST00000262675 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
TTC39A-201ENST00000262675 A0A1B0GU33 70 aa4.97□□□□□ -1.61
TTC39A-201ENST00000262675 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
TTC39A-201ENST00000262675 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
TTC39A-201ENST00000262675 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
TTC39A-201ENST00000262675 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
TTC39A-201ENST00000262675 M0R2T5 61 aa4.94□□□□□ -1.62
TTC39A-201ENST00000262675 H0YAA0 97 aa4.92□□□□□ -1.62
TTC39A-201ENST00000262675 K7ERS5 55 aa4.89□□□□□ -1.63
TTC39A-201ENST00000262675 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
TTC39A-201ENST00000262675 CSAG1Q6PB30 78 aa4.85□□□□□ -1.63
TTC39A-201ENST00000262675 S4R3F8 94 aa4.84□□□□□ -1.64
TTC39A-201ENST00000262675 KRTAP3-3Q9BYR6 98 aa4.82□□□□□ -1.64
TTC39A-201ENST00000262675 H3BS24 57 aa4.8□□□□□ -1.64
TTC39A-201ENST00000262675 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
TTC39A-201ENST00000262675 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
TTC39A-201ENST00000262675 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
TTC39A-201ENST00000262675 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
TTC39A-201ENST00000262675 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
TTC39A-201ENST00000262675 ROMO1P60602 79 aa4.71□□□□□ -1.66
TTC39A-201ENST00000262675 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
TTC39A-201ENST00000262675 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
TTC39A-201ENST00000262675 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
TTC39A-201ENST00000262675 M0QZ58 72 aa4.67□□□□□ -1.66
TTC39A-201ENST00000262675 P0C880 135 aa4.65□□□□□ -1.67
TTC39A-201ENST00000262675 A0A0D9SG42 100 aa4.63□□□□□ -1.67
TTC39A-201ENST00000262675 MT2AP02795 61 aa4.62□□□□□ -1.67
TTC39A-201ENST00000262675 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
TTC39A-201ENST00000262675 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
TTC39A-201ENST00000262675 USH2AO75445 5202 aa4.58□□□□□ -1.68
TTC39A-201ENST00000262675 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
TTC39A-201ENST00000262675 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
TTC39A-201ENST00000262675 LCE2BO14633 110 aa4.56□□□□□ -1.68
TTC39A-201ENST00000262675 MT1FP04733 61 aa4.56□□□□□ -1.68
TTC39A-201ENST00000262675 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
TTC39A-201ENST00000262675 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
TTC39A-201ENST00000262675 CRIPTQ9P021 101 aa4.53□□□□□ -1.68
TTC39A-201ENST00000262675 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
TTC39A-201ENST00000262675 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
TTC39A-201ENST00000262675 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
TTC39A-201ENST00000262675 R4GN34 69 aa4.48□□□□□ -1.69
TTC39A-201ENST00000262675 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
TTC39A-201ENST00000262675 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
TTC39A-201ENST00000262675 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
TTC39A-201ENST00000262675 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
TTC39A-201ENST00000262675 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
TTC39A-201ENST00000262675 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
TTC39A-201ENST00000262675 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
TTC39A-201ENST00000262675 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
TTC39A-201ENST00000262675 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
TTC39A-201ENST00000262675 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
TTC39A-201ENST00000262675 NEBP20929 6669 aa4.16□□□□□ -1.74
TTC39A-201ENST00000262675 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
TTC39A-201ENST00000262675 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
TTC39A-201ENST00000262675 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
TTC39A-201ENST00000262675 MT1BP07438 61 aa4.14□□□□□ -1.75
TTC39A-201ENST00000262675 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
TTC39A-201ENST00000262675 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
TTC39A-201ENST00000262675 TNP1P09430 55 aa4.13□□□□□ -1.75
TTC39A-201ENST00000262675 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
TTC39A-201ENST00000262675 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
TTC39A-201ENST00000262675 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
TTC39A-201ENST00000262675 LUZP6Q538Z0 58 aa4□□□□□ -1.77
TTC39A-201ENST00000262675 PRO2289Q9P1D8 64 aa3.98□□□□□ -1.77
TTC39A-201ENST00000262675 KMT2DO14686 5537 aa3.94□□□□□ -1.78
TTC39A-201ENST00000262675 SPRR2EP22531 72 aa3.93□□□□□ -1.78
TTC39A-201ENST00000262675 SPRR2BP35325 72 aa3.93□□□□□ -1.78
TTC39A-201ENST00000262675 SPRR2AP35326 72 aa3.93□□□□□ -1.78
TTC39A-201ENST00000262675 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
TTC39A-201ENST00000262675 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms