RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 SMIM26A0A096LP01 95 aa10.79□□□□□ -0.68
CCNE1-201ENST00000262643 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
CCNE1-201ENST00000262643 ACYP2P14621 99 aa10.76□□□□□ -0.69
CCNE1-201ENST00000262643 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
CCNE1-201ENST00000262643 RBM12B-AS1Q9P1G2 102 aa10.7□□□□□ -0.7
CCNE1-201ENST00000262643 MPLKIPQ8TAP9 179 aa10.68□□□□□ -0.7
CCNE1-201ENST00000262643 KRTAP3-1Q9BYR8 98 aa10.67□□□□□ -0.7
CCNE1-201ENST00000262643 A8MUN3 132 aa10.63□□□□□ -0.71
CCNE1-201ENST00000262643 CHKB-CPT1BH3BT56 60 aa10.62□□□□□ -0.71
CCNE1-201ENST00000262643 FSIP2Q5CZC0 6907 aa10.58□□□□□ -0.72
CCNE1-201ENST00000262643 KRTAP9-6A0A140TA67 174 aa10.57□□□□□ -0.72
CCNE1-201ENST00000262643 Q1T7F1 81 aa10.55□□□□□ -0.72
CCNE1-201ENST00000262643 V9GYY9 64 aa10.48□□□□□ -0.73
CCNE1-201ENST00000262643 KRTAP9-8Q9BYQ0 159 aa10.46□□□□□ -0.73
CCNE1-201ENST00000262643 PSPHP1O15172 72 aa10.41□□□□□ -0.74
CCNE1-201ENST00000262643 CRCT1Q9UGL9 99 aa10.4□□□□□ -0.74
CCNE1-201ENST00000262643 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
CCNE1-201ENST00000262643 PRR15LQ9BU68 103 aa10.36□□□□□ -0.75
CCNE1-201ENST00000262643 MT2AP02795 61 aa10.34□□□□□ -0.75
CCNE1-201ENST00000262643 H1FX-AS1Q4G0G2 97 aa10.34□□□□□ -0.75
CCNE1-201ENST00000262643 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
CCNE1-201ENST00000262643 LCA10Q71F78 164 aa10.29□□□□□ -0.76
CCNE1-201ENST00000262643 Q5VV11 94 aa10.29□□□□□ -0.76
CCNE1-201ENST00000262643 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
CCNE1-201ENST00000262643 S4R3F8 94 aa10.28□□□□□ -0.76
CCNE1-201ENST00000262643 MT1FP04733 61 aa10.27□□□□□ -0.77
CCNE1-201ENST00000262643 KRTAP10-10P60014 251 aa10.24□□□□□ -0.77
CCNE1-201ENST00000262643 A0A1B0GU69 56 aa10.22□□□□□ -0.77
CCNE1-201ENST00000262643 USH2AO75445 5202 aa10.15□□□□□ -0.78
CCNE1-201ENST00000262643 KRTAP9-3Q9BYQ3 159 aa10.12□□□□□ -0.79
CCNE1-201ENST00000262643 SEC61GP60059 68 aa10.11□□□□□ -0.79
CCNE1-201ENST00000262643 A6NED7 52 aa10.07□□□□□ -0.8
CCNE1-201ENST00000262643 BRK1Q8WUW1 75 aa10.07□□□□□ -0.8
CCNE1-201ENST00000262643 SSPOA2VEC9 5147 aa10.07□□□□□ -0.8
CCNE1-201ENST00000262643 LCE2BO14633 110 aa10.06□□□□□ -0.8
CCNE1-201ENST00000262643 CSAG1Q6PB30 78 aa10.04□□□□□ -0.8
CCNE1-201ENST00000262643 A8MU10 97 aa9.92□□□□□ -0.82
CCNE1-201ENST00000262643 UQCR11O14957 56 aa9.92□□□□□ -0.82
CCNE1-201ENST00000262643 KRTAP3-2Q9BYR7 98 aa9.91□□□□□ -0.82
CCNE1-201ENST00000262643 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
CCNE1-201ENST00000262643 A0A1B0GU33 70 aa9.87□□□□□ -0.83
CCNE1-201ENST00000262643 PRO0628Q9UI54 55 aa9.87□□□□□ -0.83
CCNE1-201ENST00000262643 ADM2Q7Z4H4 148 aa9.86□□□□□ -0.83
CCNE1-201ENST00000262643 P0C880 135 aa9.83□□□□□ -0.84
CCNE1-201ENST00000262643 MIR22HGQ0VDD5 57 aa9.83□□□□□ -0.84
CCNE1-201ENST00000262643 KRTAP19-1Q8IUB9 90 aa9.83□□□□□ -0.84
CCNE1-201ENST00000262643 SPATA8Q6RVD6 105 aa9.8□□□□□ -0.84
CCNE1-201ENST00000262643 H0YAA0 97 aa9.77□□□□□ -0.85
CCNE1-201ENST00000262643 FCGBPQ9Y6R7 5405 aaPredicted RBP9.76□□□□□ -0.85
CCNE1-201ENST00000262643 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.68□□□□□ -0.86
CCNE1-201ENST00000262643 KRTAP19-6Q3LI70 58 aa9.65□□□□□ -0.86
CCNE1-201ENST00000262643 KRTAP13-4Q3LI77 160 aa9.65□□□□□ -0.86
CCNE1-201ENST00000262643 SPRR2GQ9BYE4 73 aa9.53□□□□□ -0.88
CCNE1-201ENST00000262643 KRTAP9-7A8MTY7 169 aa9.52□□□□□ -0.89
CCNE1-201ENST00000262643 M0QZ58 72 aa9.51□□□□□ -0.89
CCNE1-201ENST00000262643 PMAIP1Q13794 54 aa9.51□□□□□ -0.89
CCNE1-201ENST00000262643 A0A0D9SG42 100 aa9.49□□□□□ -0.89
CCNE1-201ENST00000262643 R4GN34 69 aa9.49□□□□□ -0.89
CCNE1-201ENST00000262643 MACF1Q9UPN3 7388 aaKnown RBP9.46□□□□□ -0.89
CCNE1-201ENST00000262643 MT1BP07438 61 aa9.45□□□□□ -0.9
CCNE1-201ENST00000262643 KRTAP19-8Q3LI54 63 aa9.44□□□□□ -0.9
CCNE1-201ENST00000262643 A6NN06 94 aa9.42□□□□□ -0.9
CCNE1-201ENST00000262643 CRIPTQ9P021 101 aa9.42□□□□□ -0.9
CCNE1-201ENST00000262643 SYNE2Q8WXH0 6885 aaKnown RBP9.38□□□□□ -0.91
CCNE1-201ENST00000262643 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
CCNE1-201ENST00000262643 K7ERS5 55 aa9.34□□□□□ -0.91
CCNE1-201ENST00000262643 SVIPQ8NHG7 77 aa9.29□□□□□ -0.92
CCNE1-201ENST00000262643 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
CCNE1-201ENST00000262643 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
CCNE1-201ENST00000262643 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
CCNE1-201ENST00000262643 KRTAP10-5P60370 271 aa9.19□□□□□ -0.94
CCNE1-201ENST00000262643 KTN1-AS1Q86SY8 53 aa9.13□□□□□ -0.95
CCNE1-201ENST00000262643 KRTAP6-3Q3LI67 103 aa9.08□□□□□ -0.96
CCNE1-201ENST00000262643 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
CCNE1-201ENST00000262643 ROMO1P60602 79 aa8.98□□□□□ -0.97
CCNE1-201ENST00000262643 PRAC1Q96KF2 57 aa8.93□□□□□ -0.98
CCNE1-201ENST00000262643 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
CCNE1-201ENST00000262643 MT1XP80297 61 aa8.9□□□□□ -0.98
CCNE1-201ENST00000262643 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
CCNE1-201ENST00000262643 MUC12Q9UKN1 5478 aa8.79□□□□□ -1
CCNE1-201ENST00000262643 C10orf95Q9H7T3 257 aa8.78□□□□□ -1
CCNE1-201ENST00000262643 KMT2DO14686 5537 aa8.75□□□□□ -1.01
CCNE1-201ENST00000262643 NEBP20929 6669 aa8.72□□□□□ -1.01
CCNE1-201ENST00000262643 KRTAP5-9P26371 169 aa8.71□□□□□ -1.01
CCNE1-201ENST00000262643 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
CCNE1-201ENST00000262643 MDN1Q9NU22 5596 aa8.58□□□□□ -1.04
CCNE1-201ENST00000262643 KRTAP8-1Q8IUC2 63 aa8.56□□□□□ -1.04
CCNE1-201ENST00000262643 SPRR2FQ96RM1 72 aa8.54□□□□□ -1.04
CCNE1-201ENST00000262643 KRTAP10-7P60409 375 aaPredicted RBP8.53□□□□□ -1.04
CCNE1-201ENST00000262643 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
CCNE1-201ENST00000262643 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
CCNE1-201ENST00000262643 TNP1P09430 55 aa8.46□□□□□ -1.06
CCNE1-201ENST00000262643 KRTAP10-12P60413 245 aa8.44□□□□□ -1.06
CCNE1-201ENST00000262643 SPRR2EP22531 72 aa8.38□□□□□ -1.07
CCNE1-201ENST00000262643 SPRR2BP35325 72 aa8.38□□□□□ -1.07
CCNE1-201ENST00000262643 SPRR2AP35326 72 aa8.38□□□□□ -1.07
CCNE1-201ENST00000262643 KRTAP20-1Q3LI63 56 aa8.36□□□□□ -1.07
CCNE1-201ENST00000262643 LCE1AQ5T7P2 110 aa8.27□□□□□ -1.09
CCNE1-201ENST00000262643 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
CCNE1-201ENST00000262643 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 254.4 ms