RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 V9GYY9 64 aa6.44□□□□□ -1.38
VAMP7-201ENST00000262640 KRTAP19-2Q3LHN2 52 aa6.44□□□□□ -1.38
VAMP7-201ENST00000262640 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
VAMP7-201ENST00000262640 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
VAMP7-201ENST00000262640 LINC01558Q9Y6Z2 57 aa6.4□□□□□ -1.38
VAMP7-201ENST00000262640 RNF213Q63HN8 5207 aa6.4□□□□□ -1.38
VAMP7-201ENST00000262640 MUC2Q02817 5179 aa6.39□□□□□ -1.39
VAMP7-201ENST00000262640 CSAG1Q6PB30 78 aa6.34□□□□□ -1.39
VAMP7-201ENST00000262640 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
VAMP7-201ENST00000262640 A0A1B0GU69 56 aa6.32□□□□□ -1.4
VAMP7-201ENST00000262640 PSPHP1O15172 72 aa6.32□□□□□ -1.4
VAMP7-201ENST00000262640 FLGP20930 4061 aaPredicted RBP6.31□□□□□ -1.4
VAMP7-201ENST00000262640 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
VAMP7-201ENST00000262640 SEC61GP60059 68 aa6.3□□□□□ -1.4
VAMP7-201ENST00000262640 Q5VV11 94 aa6.27□□□□□ -1.41
VAMP7-201ENST00000262640 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
VAMP7-201ENST00000262640 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
VAMP7-201ENST00000262640 H0YAA0 97 aa6.2□□□□□ -1.42
VAMP7-201ENST00000262640 MT1HP80294 61 aa6.19□□□□□ -1.42
VAMP7-201ENST00000262640 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
VAMP7-201ENST00000262640 ADM2Q7Z4H4 148 aa6.18□□□□□ -1.42
VAMP7-201ENST00000262640 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
VAMP7-201ENST00000262640 A6NED7 52 aa6.14□□□□□ -1.43
VAMP7-201ENST00000262640 M0R2T5 61 aa6.14□□□□□ -1.43
VAMP7-201ENST00000262640 A0A1B0GU33 70 aa6.13□□□□□ -1.43
VAMP7-201ENST00000262640 P0C880 135 aa6.13□□□□□ -1.43
VAMP7-201ENST00000262640 UQCR11O14957 56 aa6.12□□□□□ -1.43
VAMP7-201ENST00000262640 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
VAMP7-201ENST00000262640 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
VAMP7-201ENST00000262640 SPATA8Q6RVD6 105 aa6.03□□□□□ -1.44
VAMP7-201ENST00000262640 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
VAMP7-201ENST00000262640 M0QZ58 72 aa6□□□□□ -1.45
VAMP7-201ENST00000262640 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
VAMP7-201ENST00000262640 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
VAMP7-201ENST00000262640 R4GN34 69 aa5.97□□□□□ -1.45
VAMP7-201ENST00000262640 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
VAMP7-201ENST00000262640 A8MU10 97 aa5.96□□□□□ -1.46
VAMP7-201ENST00000262640 CRIPTQ9P021 101 aa5.96□□□□□ -1.46
VAMP7-201ENST00000262640 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
VAMP7-201ENST00000262640 MT2AP02795 61 aa5.94□□□□□ -1.46
VAMP7-201ENST00000262640 PRO0628Q9UI54 55 aa5.9□□□□□ -1.46
VAMP7-201ENST00000262640 MT1FP04733 61 aa5.9□□□□□ -1.47
VAMP7-201ENST00000262640 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
VAMP7-201ENST00000262640 A0A0D9SG42 100 aa5.89□□□□□ -1.47
VAMP7-201ENST00000262640 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
VAMP7-201ENST00000262640 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
VAMP7-201ENST00000262640 K7ERS5 55 aa5.8□□□□□ -1.48
VAMP7-201ENST00000262640 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
VAMP7-201ENST00000262640 KRTAP12-1P59990 96 aa5.77□□□□□ -1.48
VAMP7-201ENST00000262640 A6NN06 94 aa5.76□□□□□ -1.49
VAMP7-201ENST00000262640 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
VAMP7-201ENST00000262640 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
VAMP7-201ENST00000262640 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
VAMP7-201ENST00000262640 PMAIP1Q13794 54 aa5.71□□□□□ -1.49
VAMP7-201ENST00000262640 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
VAMP7-201ENST00000262640 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
VAMP7-201ENST00000262640 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
VAMP7-201ENST00000262640 MT1BP07438 61 aa5.58□□□□□ -1.52
VAMP7-201ENST00000262640 LCE2BO14633 110 aa5.57□□□□□ -1.52
VAMP7-201ENST00000262640 ROMO1P60602 79 aa5.54□□□□□ -1.52
VAMP7-201ENST00000262640 KTN1-AS1Q86SY8 53 aa5.47□□□□□ -1.53
VAMP7-201ENST00000262640 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
VAMP7-201ENST00000262640 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
VAMP7-201ENST00000262640 USH2AO75445 5202 aa5.42□□□□□ -1.54
VAMP7-201ENST00000262640 MT1XP80297 61 aa5.4□□□□□ -1.55
VAMP7-201ENST00000262640 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
VAMP7-201ENST00000262640 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
VAMP7-201ENST00000262640 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
VAMP7-201ENST00000262640 PRAC1Q96KF2 57 aa5.34□□□□□ -1.56
VAMP7-201ENST00000262640 TNP1P09430 55 aa5.32□□□□□ -1.56
VAMP7-201ENST00000262640 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
VAMP7-201ENST00000262640 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
VAMP7-201ENST00000262640 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
VAMP7-201ENST00000262640 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
VAMP7-201ENST00000262640 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
VAMP7-201ENST00000262640 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
VAMP7-201ENST00000262640 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
VAMP7-201ENST00000262640 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
VAMP7-201ENST00000262640 H3BS24 57 aa5.12□□□□□ -1.59
VAMP7-201ENST00000262640 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
VAMP7-201ENST00000262640 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
VAMP7-201ENST00000262640 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
VAMP7-201ENST00000262640 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
VAMP7-201ENST00000262640 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.62
VAMP7-201ENST00000262640 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
VAMP7-201ENST00000262640 KMT2DO14686 5537 aa4.89□□□□□ -1.63
VAMP7-201ENST00000262640 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
VAMP7-201ENST00000262640 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
VAMP7-201ENST00000262640 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
VAMP7-201ENST00000262640 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
VAMP7-201ENST00000262640 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
VAMP7-201ENST00000262640 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
VAMP7-201ENST00000262640 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
VAMP7-201ENST00000262640 MT1EP04732 61 aa4.73□□□□□ -1.65
VAMP7-201ENST00000262640 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
VAMP7-201ENST00000262640 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
VAMP7-201ENST00000262640 MT1LQ93083 61 aa4.64□□□□□ -1.67
VAMP7-201ENST00000262640 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
VAMP7-201ENST00000262640 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
VAMP7-201ENST00000262640 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms